KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:17 2014 Check: 00 .. Name: ENSBTAP00000013718/1-287 Len: 295 Check: 7677 Weight: 1.00 Name: ENSP00000362936/1-287 Len: 295 Check: 8301 Weight: 1.00 Name: ENSTTRP00000001744/1-287 Len: 295 Check: 8319 Weight: 1.00 Name: BACU003265/1-244 Len: 295 Check: 1385 Weight: 1.00 Name: bmy_08013T0/1-282 Len: 295 Check: 5953 Weight: 1.00 // 1 50 ENSBTAP00000013718/1-287 --------MA ASLWMGDLEP YMDENFISRA FATMGETVMS VKIIRNRLTG ENSP00000362936/1-287 --------MA ASLWMGDLEP YMDENFISRA FATMGETVMS VKIIRNRLTG ENSTTRP00000001744/1-287 --------MA ASLWMGDLEP YMDENFISRA FATMGETVMS VKIIRNRLTG BACU003265/1-244 MRSLDAGLSH SALVFTQLEP YMDENFISRA FATMGETVMS VKIIRNRLTG bmy_08013T0/1-282 MRSLDAGLSR SALVFTQLEP YMDENFISRA FATMGETVMS VKIIRNRLTG 51 100 ENSBTAP00000013718/1-287 IPAGYCFVEF ADLATAEKCL HKINGKPLPG ATPAKRFKLN YATYGKQPDN ENSP00000362936/1-287 IPAGYCFVEF ADLATAEKCL HKINGKPLPG ATPAKRFKLN YATYGKQPDN ENSTTRP00000001744/1-287 IPAGYCFVEF ADLATAEKCL HKINGKPLPG ATPAKRFKLN YATYGKQPDN BACU003265/1-244 ---------- ---------- ---------- ---------- ---------- bmy_08013T0/1-282 IPAGYCFVEF ADLATAEKCL HKINGKPLPG ATPAKRFKLN YATYGKQPDN 101 150 ENSBTAP00000013718/1-287 SPEYSLFVGD LTPDVDDGML YEFFVKVYPS CRGGKVVLDQ TGVSKGYGFV ENSP00000362936/1-287 SPEYSLFVGD LTPDVDDGML YEFFVKVYPS CRGGKVVLDQ TGVSKGYGFV ENSTTRP00000001744/1-287 SPEYSLFVGD LTPDVDDGML YEFFVKVYPS CRGGKVVLDQ TGVSKGYGFV BACU003265/1-244 -PEYSLFVGD LTPDVDDGML YEFFVKVYPS CRGGKVVLDQ TGVSKGYGFV bmy_08013T0/1-282 SPEYSLFVGD LTPDVDDGML YEFFVKVYPS CRGGKVVLDQ TGVSKGYGFV 151 200 ENSBTAP00000013718/1-287 KFTDELEQKR ALTECQGAIG LGSKPVRLSV AIPKASRVKP VEYSQMYSYS ENSP00000362936/1-287 KFTDELEQKR ALTECQGAVG LGSKPVRLSV AIPKASRVKP VEYSQMYSYS ENSTTRP00000001744/1-287 KFTDELEQKR ALTECQGAVG LGSKPVRLSV AIPKASRVKP VEYSQMYSYS BACU003265/1-244 KFTDELEQKR ALTECQGAVG LGSKPVRLSV AIPKASRVKP VEYSQMYSYS bmy_08013T0/1-282 KFTDELEQKR ALTECQGAVG LGSKPVRLSV AIPKA----- --------YS 201 250 ENSBTAP00000013718/1-287 YNQYYQQYQN YYAQWGYDQN TGSYSYSYPQ YGYTQSTMQT YEEVGDDALE ENSP00000362936/1-287 YNQYYQQYQN YYAQWGYDQN TGSYSYSYPQ YGYTQSTMQT YEEVGDDALE ENSTTRP00000001744/1-287 YNQYYQQYQN YYAQWGYDQN TGSYSYSYPQ YGYTQSTMQT YEEVGDDALE BACU003265/1-244 YNQYYQQYQN YYAQWGYDQN TGSYSYSYPQ YGYTQSTMQT YEEVGDDALE bmy_08013T0/1-282 YNQYYQQYQN YYAQWGYDQN TGSYSYSYPQ YGYTQSTMQT YEEVGDDALE 251 300 ENSBTAP00000013718/1-287 DPMPQLDVTE ANKEFMEQSE ELYDALMDCH WQPLDTVSSE IPAMM ENSP00000362936/1-287 DPMPQLDVTE ANKEFMEQSE ELYDALMDCH WQPLDTVSSE IPAMM ENSTTRP00000001744/1-287 DPMPQLDVTE ANKEFMEQSE ELYDALMDCH WQPLDTVSSE IPAVM BACU003265/1-244 DPMPQLDVTE ANKEFMEQSE ELYDALMDCH WQPLDTVSSE IPAVM bmy_08013T0/1-282 DPMPQLDVTE ANKEFMEQSE ELYDALMDCH WQPLDTVSSE IPAVM