KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:19 2014 Check: 00 .. Name: ENSP00000225698/1-282 Len: 283 Check: 6672 Weight: 1.00 Name: ENSBTAP00000013734/1-278 Len: 283 Check: 9944 Weight: 1.00 Name: ENSTTRP00000013977/1-278 Len: 283 Check: 1404 Weight: 1.00 Name: bmy_08627T0/1-153 Len: 283 Check: 5119 Weight: 1.00 Name: BACU020236/1-278 Len: 283 Check: 1866 Weight: 1.00 // 1 50 ENSP00000225698/1-282 MLPLLRCVPR VLGSSVAGLR AAAPASPFRQ LLQPAPRLCT RPFGLLSVRA ENSBTAP00000013734/1-278 MFQLLRCVPR VLGTAVAGLR AAAPSLP--- RLQPASRPCA RPFGLLSVRA ENSTTRP00000013977/1-278 MLPLLRCVPR VLGTAVAGIR AAAPSLP--- LLQPASRPCA RPFGLLSVRA bmy_08627T0/1-153 ---------- ---------- ---------- ---------- ---------- BACU020236/1-278 MLPLLRCVPR VLGTAVAGIR AAAPSLP--- LLQPASRPCA RPFGLLSVRA 51 100 ENSP00000225698/1-282 GSERRPGLLR PRGPCACGCG CGSLHTDGDK AFVDFLSDEI KEERKIQKHK ENSBTAP00000013734/1-278 RSVQLPGLLK PRGPCACGCG CSGLHTEGDK AFVDFLSDEI KEEKKIQKYK ENSTTRP00000013977/1-278 GSVQLPGLLR PWGPCGCGCG CGGLHTEGDK AFVEFLNDEI KEEKKIQKYK bmy_08627T0/1-153 ---------- ---------- ---------- ---------- ---------- BACU020236/1-278 GSVQLPGLLR PWGPCGCGCG CGGLHTEGDK AFVEFLKDEI KEEKKIQKYK 101 150 ENSP00000225698/1-282 TLPKMSGGWE LELNGTEAKL VRKVAGEKIT VTFNINNSIP PTFDG-EEEP ENSBTAP00000013734/1-278 SLPKMSGGWE LEVNGTEAKL VRKVAGEKIT VTFNINNSIP PAFGGEEEEP ENSTTRP00000013977/1-278 SLPKMSGGWA LEVNGTEAKL VQKVAGERVT VTFNINNSIP PAYDG-EEGP bmy_08627T0/1-153 ---------- ---------- --------VT VTFNINNSIP PAYDG-EEEP BACU020236/1-278 SLPKMSGGWE LEVNGTEAKL LRKVAGEKVT VTFNINNSIP PAYNG-EEEP 151 200 ENSP00000225698/1-282 SQGQKVEEQE PELTSTPNFV VEVIKNDDGK KALVLDCHYP EDEVGQEDEA ENSBTAP00000013734/1-278 SQGQKAEEQE PELTSTPNFV VEVTK-DGSS KALVLDCHYP EDEIGQED-D ENSTTRP00000013977/1-278 SEGQKVEEQE PELTSTPNFV VEVVK-DGSN KALVLDCHFP EDEIGQEEED bmy_08627T0/1-153 SEGQKVEEQE PELTSTPNFV VEVVK-DGXN KALVLDCHYP EDEIGQEEED BACU020236/1-278 SEGQKVEEQE PELTSTPNFV VEVVK-DGSN KALVLDCHYP EDEIGQEEED 201 250 ENSP00000225698/1-282 ESDIFSIREV SFQSTGESEW KDTNYTLNTD SLDWALYDHL MDFLADRGVD ENSBTAP00000013734/1-278 QSDIFSIKEV SFQATGESDW KDTNYTLNTD SLDWGLYDHL MDFLADRGVD ENSTTRP00000013977/1-278 QSDIFSIKEV SFQSTGDSDW KDTNYTLSTD SLDWGLYDHL MDFLADRGVD bmy_08627T0/1-153 QSDIFSIKEV SFQSTGDSDW KDTNYTLSTD SLDWGLYDHL MDFLADRGVD BACU020236/1-278 QSDIFSIKEV SFQSTGDSDW KDTNYTLSTD SLDWGLYDHL MDFLADRGVD 251 300 ENSP00000225698/1-282 NTFADELVEL STALEHQEYI TFLEDLKSFV KSQ ENSBTAP00000013734/1-278 NTFADELVEL STALEHQEYI SFLEDLKGFV KSK ENSTTRP00000013977/1-278 NTFADELVEL STALEHQEYI TFLEDLKGFV KSQ bmy_08627T0/1-153 NTFADELVEL STALEHQEYI TFLEDLKGFV KSQ BACU020236/1-278 NTFADELVEL STALEHQEYI TFLEDLKGFV KSQ