KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:24 2014 Check: 00 .. Name: ENSBTAP00000013748/1-996 Len: 1029 Check: 6233 Weight: 1.00 Name: ENSP00000216487/1-985 Len: 1029 Check: 538 Weight: 1.00 Name: ENSTTRP00000001438/1-972 Len: 1029 Check: 55 Weight: 1.00 Name: bmy_08701T0/1-1022 Len: 1029 Check: 8735 Weight: 1.00 Name: BACU010724/1-658 Len: 1029 Check: 9741 Weight: 1.00 // 1 50 ENSBTAP00000013748/1-996 -SSFPRGPDL LHPHPPIPDV GKGERQEEEE EDGVGPGLPG TLKNCLP-RR ENSP00000216487/1-985 MIRHAGAPAR GDPTGPVPVV GKGE--EEEE EDGMRLCLPA NPKNCLPHRR ENSTTRP00000001438/1-972 ---------- -----PIPDV GKGEGQQEEE EDGVGPRLPV TPKNCLP-LR bmy_08701T0/1-1022 MIRRAGAPEC ADPAGPSPDV GKGKAQEEEE EDGVGPCLPV TPRNCLP-LR BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000013748/1-996 DFSVLEKLVK TCPVWLQLGL GRVEAARILH REAAGTFLVR RDSSLKHLVL ENSP00000216487/1-985 GISILEKLIK TCPVWLQLSL GQAEVARILH RVVAGMFLVR RDSSSKQLVL ENSTTRP00000001438/1-972 GISVLEKLVK TCPVWLHVGL GRAEATRILH REAAGTFLVR RDSSLKHPVL bmy_08701T0/1-1022 GISVLEKLVK TCPVWLHLGL GRAEATRILH REAAGTFLVR RDSSLKHLVL BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000013748/1-996 CVHFPSLNES SSEVLEYTIK EEK------- -----SILYL EGSVLVFEDI ENSP00000216487/1-985 CVHFPSLNES SAEVLEYTIK EEK------- -----SILYL EGSALVFEDI ENSTTRP00000001438/1-972 CVHFPSPNES SSAVLEYTIK EEK------- -----SILYL EGSVLVFEDI bmy_08701T0/1-1022 CVHFPSPNES SSAVLEYTIK EEKSRTLIQG LCPLSSVLYL EGSVLVFEDI BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000013748/1-996 FRLIAFYCVS RDLLPFTLRL PRAILEARSS TDLEIVSNLG LGFWDSSLNP ENSP00000216487/1-985 FRLIAFYCVS RDLLPFTLRL PQAILEASSF TDLETIANLG LGFWDSSLNP ENSTTRP00000001438/1-972 FRLIAFYCVS RDLLPFKLRL PQAILEASSF TDLKTISNLG LGFWDSSLNP bmy_08701T0/1-1022 FRLIAFYCVS RDLLPFKLRL PQAILEASSF TDLKTISNLG LGFWDSSLNP BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000013748/1-996 RRGGGSPAEA PRDPAPGATP ASSLKSTAHP ENCSCEIELS IGNGRLWFVN ENSP00000216487/1-985 PQERGKPAEP PRDRAPGFPL VSSLRPTAHD ANCACEIELS VGNDRLWFVN ENSTTRP00000001438/1-972 RPGGGSPVEA PRDPAPGAPP ASILRSSAHY ENCSCEIELP IGNGRLWFVN bmy_08701T0/1-1022 RRGGGSPVEA PRDPAPGAPP ASILRSSAHY ENCSCEIELS LGNGRLWFVN BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000013748/1-996 PIFIEDCDRA PPADQPPAGS CPSRPAPPTP DATSPTSRWA PRRPAPPPPP ENSP00000216487/1-985 PIFIEDCSSA LPTDQPPLGN CPARPLPPTS DATSPTSRWA PRRPPPPPPV ENSTTRP00000001438/1-972 PAFIEDCGSS LPADQPPPGS CPL-PSPPAS EATSPTSRWA PRRPAPPPPP bmy_08701T0/1-1022 PIFIEDCGSS LPADQPPPGS CPLRPSPPTS DATSPTSRWA PRRPAPPPPP BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000013748/1-996 LPLHPPGFSR PPPAAPTP-- --PASP---- --------SP SSPPASAPHL ENSP00000216487/1-985 LPLQPCSPAQ PPV--LPALA PAPACP---- --------LP TSPPVPAPHV ENSTTRP00000001438/1-972 LPLHPPSSSR PPP--PPALA PASASP---- --------LP PSPPASAPRL bmy_08701T0/1-1022 LPLHPPGSSR PPPPAPPPAC PLPSSPSAGA TPHLHPEALP PSPPASAPRL BACU010724/1-658 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000013748/1-996 APHAPGPPGL PSQPPMTACE RLPRPFAGLD PLREEEMKPG AAASPL-KTP ENSP00000216487/1-985 TPHAPGPPDH PNQPPMMTCE RLPCPTAGLG PLREEAMKPG AASSPLQQVP ENSTTRP00000001438/1-972 APHTPGPPEL PSQPPMTACE RLPRPLAGLG PLREEEMKPG AAPSPL-QSP bmy_08701T0/1-1022 APHTPGPPEL PSQPPMTACE RLPRPLAGLG PLREEEMKPG AAPSPL-QAP BACU010724/1-658 ---------- -----MTACE RLPRPLAGLG PLREDEVKPG AAPSPL-QAP 401 450 ENSBTAP00000013748/1-996 APPVPTKKSL PAVPPRRRIS EKVSLEDQSA GKPDRGAAAE GDPGGPSRAS ENSP00000216487/1-985 APPLPAKKNL PTAPPRRRVS ERVSLEDQSP -----GMAAE GD-------- ENSTTRP00000001438/1-972 VPPAPTKKSL PAAPPRRRIA EKASLEDPSA GKADRGAAAE GD-------- bmy_08701T0/1-1022 VPPVPTKKSL PAAPPRRRIA EKVSLEDQSA GKADRGATAE GDPVGLSRAS BACU010724/1-658 VPPVPTKKSL PAAPPRRRIT EKVSLEDQSA GKADRGSAAE GEPVGLSRAS 451 500 ENSBTAP00000013748/1-996 PLRLPPLRTS DTPGDRPQRT TEPGQEASAQ ASNPGSAPEP LRKIRQAPVP ENSP00000216487/1-985 QLSLPPQGTS DGPEDTPRES TEQGQDTEVK ASDPHSMPEL PRTAKQPPVP ENSTTRP00000001438/1-972 PLRLPPQGTS GSPGDGPQRT TEQGQEAAAK AGDPGSMPEP PRKIRQPPVP bmy_08701T0/1-1022 PLRLPPEGTS DSPGDRPQRT TEQGQEAVAK AGDLGSLPEP PRKIRQPPVP BACU010724/1-658 PLRLPPEGTS DSPGDRPQRT TEQGQEAVAK AGNLGSLPEP PRKIRQPPVP 501 550 ENSBTAP00000013748/1-996 PPRKKRVSRQ LASVLPTPQE TAELSAAGEA PEKPTPGPPP GEIQGPASPA ENSP00000216487/1-985 PPRKKRISRQ LASTLPAPLE NAELCTQAMA LETPTPG-PP REGQSPA-SQ ENSTTRP00000001438/1-972 PPRKKRLSRQ LVSVLPIPLE TAELSTDGEA PENPRPG-PL GEGQGPA-PT bmy_08701T0/1-1022 PPRKKRLSRQ LASVLPIPLE TAELSTDGEV PENPTPG-PP GEGQGPA-PT BACU010724/1-658 PPRKKRLSRQ LASVLPVPLE TAELSTDGEA PENPTPG-PP GEGQGPA-PT 551 600 ENSBTAP00000013748/1-996 GGNQSPHAPA GARPQSAPEF KGSLASLSDS LGVPASAADQ DSYSTSSTEE ENSP00000216487/1-985 AGTQHPPAQA TAHSQSSPEF KGSLASLSDS LGVSVMATDQ DSYSTSSTEE ENSTTRP00000001438/1-972 AGTQSPRARP GARPQSTPEF KGSLASLSDS LGVPASATDQ DSYSTSSTEE bmy_08701T0/1-1022 AGTQSPHARA GARPQSTPEF KGSLASLSDS LGVPSSATDQ DSYSTSSTEE BACU010724/1-658 AGTQSPHARA GARPQSTPEF KGSLASLSDS LGVPSSATDQ DSYSTSSTEE 601 650 ENSBTAP00000013748/1-996 ELEQFSSPGM KKKPSMILGK ARHRLSFVSF SNVFNAFLSN NRKLYKKVVE ENSP00000216487/1-985 ELEQFSSPSV KKKPSMILGK ARHRLSFASF SSMFHAFLSN NRKLYKKVVE ENSTTRP00000001438/1-972 ELEQFSSPGI KKKSSMILGK ARHRLSFVSF SSVFSAFLSN NRKLYKKVVE bmy_08701T0/1-1022 ELEQFSSPGV KKKSSMILGK ARHRLSFVSF TSVFSAFLSN NRKLYKKVVE BACU010724/1-658 ELEQFSSPGM KKKSSMILGK ARHRLSFVSF TSVFSAFLSN NRKLYKKVVE 651 700 ENSBTAP00000013748/1-996 LAQDKGSYFG NLVQDYKVYS LEMMSQQTSS TEMLQEIRTM MTQLKSYLLQ ENSP00000216487/1-985 LAQDKGSYFG SLVQDYKVYS LEMMARQTSS TEMLQEIRTM MTQLKSYLLQ ENSTTRP00000001438/1-972 LAQDKASYFG SLVQDYKVYS LEMMAHQTSS MEMLQEIRTM MTQLKSYLLQ bmy_08701T0/1-1022 LAQDKASYFG NLVQDYKVYS LEMMAHQTSS MEMLQEIRTM MTQLKSYLLQ BACU010724/1-658 LAQDKASYFG NLVQDYKVYS LEMMVHQTSS MEMLQEVRTM MTQLKSYLLQ 701 750 ENSBTAP00000013748/1-996 STELKALVDP TLHTEEELEA IVESALYKCV LKPLKEAIYS CLHEIHSKDS ENSP00000216487/1-985 STELKALVDP ALHSEEELEA IVESALYKCV LKPLKEAINS CLHQIHSKDG ENSTTRP00000001438/1-972 STELKALVDP ALHSEEELEA IVESALYKCV LKPLKEAINS CLREIHRKDG bmy_08701T0/1-1022 STELKALVDP ALHSEEELEA IVESALYKCV LKPLKEAINS CLREIHSKDG BACU010724/1-658 STELKTLVDP GLHSEEELEA IVESALYKCV LKPLKEAINS CLREIHSKDG 751 800 ENSBTAP00000013748/1-996 SLQQLKDNQL VILATTTTDL GVTTSVPEVP VMEKILQKFA SMHKAYSPEK ENSP00000216487/1-985 SLQQLKENQL VILATTTTDL GVTTSVPEVP MMEKILQKFT SMHKAYSPEK ENSTTRP00000001438/1-972 SLQQLKENQL VILATTTTDL GVTTSVPEVP IMEKILQKFA SMHKAYSPEK bmy_08701T0/1-1022 SLQQLKENQL VILATTTTDL GVTTSVPEVP IMEKILQKFA SMHKAYSPEK BACU010724/1-658 SLQQLKENQL VILATTTTDL GVTTSVPEVP VMEKILQKFA NMHKAYSPEK 801 850 ENSBTAP00000013748/1-996 KISILLKTCK LIYDSMALGN PGSPLGIDIF FDVLSFYLFG VSNTTKMLAF ENSP00000216487/1-985 KISILLKTCK LIYDSMALGN PGKPYGADDF LPVL-MYVLA RSNLTEMLLN ENSTTRP00000001438/1-972 KISTLLKTCK LIYDSMALGN PGKSYGADDF LPVL-MYVLA RSNLTEMLLN bmy_08701T0/1-1022 KISTLLKTCK LIYDSMALGN PGKSYGADDF LPVL-MYVLA RSNLTEMLLN BACU010724/1-658 KISTLLKTCK LIYDSMALGN PGKSYGADDF LPVL-MYVLA RSNLTEMLLN 851 900 ENSBTAP00000013748/1-996 PTVVFPVVIT SPWLGRGVPT MTTRWQVTLH XKNYDKITVT RQLSVEVQDS ENSP00000216487/1-985 VEYMMELMDP ALQLGEGSYY LTTTYGALEH IKSYDKITVT RQLSVEVQDS ENSTTRP00000001438/1-972 VEYMMELMDP ALQLGEGSYY LTTTYGALEH IKNYDKITVT RQLSVEVQDS bmy_08701T0/1-1022 VEYMMELMDP ALQLGEGSYY LTTTYGALEH MKNYDKVTVT RQLSVEVQDS BACU010724/1-658 VEYMMELMDP ALQLGEGSYY LTTTYGALEH IKNYDKITVT RQLSVEVQDS 901 950 ENSBTAP00000013748/1-996 IHRWERRRTL NKARASRSSV QDFICVSYLE PEQQSRTLAS RADTLAEALC ENSP00000216487/1-985 IHRWERRRTL NKARASRSSV QDFICVSYLE PEQQARTLAS RADTQAQALC ENSTTRP00000001438/1-972 IHRWERRRTL NKARASRSSV QDFICVSYLE PEQQSRTLAS RADTLAEVLC bmy_08701T0/1-1022 IHRWERRRTL NKARASRSSV QDFICVSYLE PEQQSRTLAS RADTLAEALC BACU010724/1-658 IHRWERRRTL NKARASRSSV QDFISVSYLE PEQQSRTLAS RADTLAEALC 951 1000 ENSBTAP00000013748/1-996 TQCAEKFEVV QPQDYRLFVL VDGRTFQLAD EALPHRIKGY LLRSEPKRDF ENSP00000216487/1-985 AQCAEKFAVE RPQAHRLFVL VDGRCFQLAD DALPHCIKGY LLRSEPKRDF ENSTTRP00000001438/1-972 AQCAEKFEVV QPQDHRLFVL VDGRCFQLAD EALPHRIKGY LLRSEPKRDF bmy_08701T0/1-1022 AQCAEKFEVV QPQDHRLFVL VDGRCFQLAD EALPHRIKGY LLRSEPKRDF BACU010724/1-658 AQCAEKFEVV QPQDHRLFVL VDGRCFQLAD EALPHRIKGY LLRSEPKRDF 1001 1050 ENSBTAP00000013748/1-996 HFVYRPLDGG GGSGG--PPC LVVREPNFL ENSP00000216487/1-985 HFVYRPLDGG GGGGGGSPPC LVVREPNFL ENSTTRP00000001438/1-972 HFVYRPLDGG GGSGG--PPC LVVREPNFL bmy_08701T0/1-1022 HFVYRPLDGG GGSGG--PPC LVVREPNFL BACU010724/1-658 HFVYRPLDGG GGSGG--PPC LVVREPNFL