KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:26 2014 Check: 00 .. Name: ENSP00000367151/1-1159 Len: 1239 Check: 7325 Weight: 1.00 Name: ENSBTAP00000013751/1-1162 Len: 1239 Check: 9762 Weight: 1.00 Name: BACU012150/1-861 Len: 1239 Check: 4441 Weight: 1.00 Name: ENSTTRP00000000209/1-1159 Len: 1239 Check: 7137 Weight: 1.00 Name: bmy_15366T0/1-1238 Len: 1239 Check: 2166 Weight: 1.00 // 1 50 ENSP00000367151/1-1159 MYLSICCCFL LWAPALTLKN LNYSVPEEQG AGTVIGNIGR DARLQPGLPP ENSBTAP00000013751/1-1162 MYLSICCCFL LWAPALTLKN LNYSVPEEQG AGTVIGNIGK DARLQPGLPP BACU012150/1-861 MYLSICCCFL LWAPALTLKN LNYSVPEEQG AGTVIGNIGK DARLQPGLPP ENSTTRP00000000209/1-1159 MYLSICCCFL LWAPALTLKN LNYSVPEEQG AGTVIGNIGK DARLQPGLPP bmy_15366T0/1-1238 MYLSICCCFL LWAPALTLKN LNYSVPEEQG AGTVIGNIGK DARLQPGLPP 51 100 ENSP00000367151/1-1159 AER--GGGGR SKSGSYRVLE NSAPHLLDVD ADSGLLYTKQ RIDRESLCRH ENSBTAP00000013751/1-1162 SERGGGGGGR SKSSSYRVLE NSAPHLLDVE ADSGLLYTKQ RIDRESLCRH BACU012150/1-861 AERGGGGGGR SKSGSYRVLE NSAPHLLDVE ADSGLLYTKQ RIDRESLCRH ENSTTRP00000000209/1-1159 AER-GGGGGR SKSGSYRVLE NSAPHLLDVE ADSGLLYTKQ RIDRESLCRH bmy_15366T0/1-1238 AERGGGGGGR SKSGSYRVLE NSAPHLLDVE ADSGLLYTKQ RIDRESLCRH 101 150 ENSP00000367151/1-1159 NAKCQLSLEV FANDKEICMI KVEIQDINDN APSFSSDQIE MDISENAAPG ENSBTAP00000013751/1-1162 NAKCQLSLEV FANDKEICMI KVEIQDINDN APSFPSDQIE MDISENAAPG BACU012150/1-861 NAKCQLSLEV FANDKEICMI KVEIQDINDN APSFPSDQIE MDISENAAPG ENSTTRP00000000209/1-1159 NAKCQLSLEV FANDKEICMI KVEIQDINDN APSFPSDQIE MDISENAAPG bmy_15366T0/1-1238 NAKCQLSLEV FANDKEICMI KVEIQDINDN APSFPSDQIE MDISENAAPG 151 200 ENSP00000367151/1-1159 TRFPLTSAHD PDAGENGLRT YLLTRDDHGL FGLDVKSRGD GTKFPELVIQ ENSBTAP00000013751/1-1162 TRFPLTSAHD PDAGENGLRT YLLTRDDHGL FALDVKSRGD GSKFPELVIQ BACU012150/1-861 TRFPLTSAHD PDAGENGLRT YLLTRDDHGL FALDVKSRGD GTKFPELVIQ ENSTTRP00000000209/1-1159 TRFPLTSAHD PDAGENGLRT YLLTRDDHGL FALDVKSRGD GTKFPELVIQ bmy_15366T0/1-1238 TRFPLTSAHD PDAGENGLRT YLLTRDDHGL FALDVKSRGD GTKFPELVIQ 201 250 ENSP00000367151/1-1159 KALDREQQNH HTLVLTALDG GEPPRSATVQ INVKVIDSND NSPVFEAPSY ENSBTAP00000013751/1-1162 KALDREQQNH HTLVLTALDG GEPPRSATVQ INVKVIDSND NSPVFEAPSY BACU012150/1-861 KALDREQQNH HTLVLTALDG GEPPRSATVQ INVKVIDSND NSPVFEAPSY ENSTTRP00000000209/1-1159 KALDREQQNH HTLVLTALDG GEPPRSATVQ INVKVIDSND NSPVFEAPSY bmy_15366T0/1-1238 KALDREQQNH HTLVLTALDG GEPPRSATVQ INVKVIDSND NSPVFEAPSY 251 300 ENSP00000367151/1-1159 LVELPENAPL GTVVIDLNAT DADEGPNGEV LYSFSSYVPD RVRELFSIDP ENSBTAP00000013751/1-1162 LVELPENAPL GTVVIDLNAT DADEGPNGEV LYSFSSYVPD RVRELFSIDP BACU012150/1-861 LVELPENAPL GTVVIDLNAT DADEGPNGEV LYSFSSYVPD RVRELFSIDP ENSTTRP00000000209/1-1159 LVELPENAPL GTVVIDLNAT DADEGPNGEV LYSFSSYVPD RVRELFSIDP bmy_15366T0/1-1238 LVELPENAPL GTVVIDLNAT DADEGPNGEV LYSFSSYVPD RVRELFSIDP 301 350 ENSP00000367151/1-1159 KTGLIRVKGN LDYEENGMLE IDVQARDLGP NPIPAHCKVT VKLIDRNDNA ENSBTAP00000013751/1-1162 KTGLIRVKGN LDYEENGMLE IDVQARDLGP NPIPAHCKVT VKLIDRNDNA BACU012150/1-861 KTGLIRVKGN LDYEENGMLE IDVQARDLGP NPIPAHCKVT VKLIDRNDNA ENSTTRP00000000209/1-1159 KTGLIRVKGN LDYEENGMLE IDVQARDLGP NPIPAHCKVT VKLIDRNDNA bmy_15366T0/1-1238 KTGLIRVKGN LDYEENGMLE IDVQARDLGP NPIPAHCKVT VKLIDRNDNA 351 400 ENSP00000367151/1-1159 PSIGFVSVRQ GALSEAAPPG TVIALVRVTD RDSGKNGQLQ CRVLGGGGTG ENSBTAP00000013751/1-1162 PSIGFVSVRQ GALSEAAPPG TVIALVRVTD RDSGKNGQLQ CRVLGGGGPG BACU012150/1-861 PSIGFVSVRQ GALSEAAPPG TVIALVRVTD RDSGKNGQLQ CRVLGGGGAG ENSTTRP00000000209/1-1159 PSIGFVSVRQ GALSEAAPPG TVIALVRVTD RDSGKNGQLQ CRVLGGGGAG bmy_15366T0/1-1238 PSIGFVSVRQ GALSEAAPPG TVIALVRVTD RDSGKNGQLQ CRVLGGGGAG 401 450 ENSP00000367151/1-1159 GGGGLGGPGG SVPFKLEENY DNFYTVVTDR PLDRETQDEY NVTIVARDGG ENSBTAP00000013751/1-1162 GGGGLGGPGG SVPFKLEENY DNFFTVVTDR PLDRETQDEY NVTIVARDGG BACU012150/1-861 GGGGLGGPGG SVLFKLEENY DNFYTVVTDR PLDRETQDEY NVTIVARDGG ENSTTRP00000000209/1-1159 GGGGLGGPGG SVPFKLEENY DNFYTVVTDR PLDRETQDEY NVTIVARDGG bmy_15366T0/1-1238 GGGGLSGPGG SVPFKLEENY DNFYTVVTDR PLDRETQDEY NVTIVARDGG 451 500 ENSP00000367151/1-1159 SPPLNSTKSF AIKILDENDN PPRFTKGLYV LQVHENNIPG EYLGSVLAQD ENSBTAP00000013751/1-1162 SPPLNSTKSF AVKILDENDN PPRFTKGLYV LQVHENNIPG EYLGSVLAQD BACU012150/1-861 SPPLNSTKSF AVKILDENDN PPRFTKGLYV LQVHENNIPG EYLGSVLAQD ENSTTRP00000000209/1-1159 S-PLNSTKSF AVKILDENDN PPRFTKGLYV LQVHENNIPG EYLGSVLAQD bmy_15366T0/1-1238 SPPLNSTKSF AVKILDENDN PPRFTKGLYV LQVHENNIPG EYLGSVLAQD 501 550 ENSP00000367151/1-1159 PDLGQNGTVS YSILPSHIGD VSIYTYVSVN PTNGAIYALR SFNFEQTKAF ENSBTAP00000013751/1-1162 PDLGQNGTVS YSILPSHIGD VSIYTYVSVN PTNGAIYALR SFNYEQTKAF BACU012150/1-861 PDLGQNGTVS YSILPSHIGD VSIYTYVSVN PTNGAIYALR SFNYEQTKAF ENSTTRP00000000209/1-1159 PDLGQNGTVS YSILPSHIGD VSIYTYVSVN PTNGAIYALR SFNYEQTKAF bmy_15366T0/1-1238 PDLGQNGTVS YSILPSHIGD VSIYTYVSVN PTNGAIYALR SFNYEQTKAF 551 600 ENSP00000367151/1-1159 EFKVLAKDSG APAHLESNAT VRVTVLDVND NAPVIVLPTL QNDTAELQVP ENSBTAP00000013751/1-1162 EFKVLAKDSG APAHLESNAT VRVTVLDVND NAPVIVLPTL QNDTAELQVP BACU012150/1-861 EFKVLAKDSG APAHLESNAT VRVTVLDVND NAPVIVLPTL QNDTAELQVP ENSTTRP00000000209/1-1159 EFKVLAKDSG APAHLESNAT VRVTVLDVND NAPVIVLPTL QNDTAELQVP bmy_15366T0/1-1238 EFKVLAKDSG APAHLESNAT VRVTVLDVND NAPVIVLPTL QNDTAELQVP 601 650 ENSP00000367151/1-1159 RNAGLGYLVS TVRALDSDFG ESGRLTYEIV DGNDDHLFEI DPSSGEIRTL ENSBTAP00000013751/1-1162 RNAGLGYLVS TVRALDSDFG ESGRLTYEIV DGNDDHLFEI DPSSGEIRTL BACU012150/1-861 RNAGLGYLVS TVRALDSDFG ESGRLTYEIV DGNDDHLFEI DPSSGEIRTL ENSTTRP00000000209/1-1159 RNAGLGYLVS TVRALDSDFG ESGRLTYEIV DGNDDHLFEI DPSSGEIRTL bmy_15366T0/1-1238 RNAGLGYLVS TVRALDSDFG ESGRLTYEIV DGNDDHLFEI DPSSGEIRTL 651 700 ENSP00000367151/1-1159 HPFWEDVTPV VELVVKVTDH GKPTLSAVAK LIIRSVSGSL PEGVPRVNGE ENSBTAP00000013751/1-1162 HPFWEDVTPV VELVVKVTDH GKPTLSAVAK LIIRSVSGSL PEGVPRVNGE BACU012150/1-861 HPFWEDVTPV VELVVKVTDH GKPTLSAVAK LIIRSVSGSL PEGVPRVNGE ENSTTRP00000000209/1-1159 HPFWEDVTPV VELVVKVTDH GKPTLSAVAK LIIRSVSGSL PEGVPRVNGE bmy_15366T0/1-1238 HPFWEDVTPV VELVVKVTDH GKPTLSAVAK LIIRSVSGSL PEGVPRVNGE 701 750 ENSP00000367151/1-1159 QHHWDMSLPL IVTLSTISII LLAAMITIAV KCKRENKEIR TYNCRIAEYS ENSBTAP00000013751/1-1162 QRHWDMSLPL IVTLSTISII LLAAMITIAV KCKRENKEIR TYNCRIAEYS BACU012150/1-861 QRHWDMSLPL IVTLSTISII LLAAMITIAV KCKRENKEIR TYNCRIAEYS ENSTTRP00000000209/1-1159 QHHWDMSLPL IVTLSTISII LLAAMITIAV KCKRENKEIR TYNCRIAEYS bmy_15366T0/1-1238 QRHWDMSLPL IVTLSTISII LLAAMITIAV KCKRENKEIR TYNCRIAEYS 751 800 ENSP00000367151/1-1159 HPQLGGGKGK KKKINKNDIM LVQSEVEERN AMNVMNVVSS PSLATSPMYF ENSBTAP00000013751/1-1162 HPQLGGGKGK KKKINKNDIM LVQSEVEERN AMNVMNVVSS PSLATSPMYF BACU012150/1-861 HPQLGGGKGK KKKINKNDIM LVQSEVEERN AMNVMNVVSS PSLATSPMYF ENSTTRP00000000209/1-1159 HPQLGGGKGK KKKINKNDIM LVQSEVEERN AMNVMNVVSS PSLATSPMYF bmy_15366T0/1-1238 HPQLGGGKGK KKKINKNDIM LVQSEVEERN AMNVMNVVSS PSLATSPMYF 801 850 ENSP00000367151/1-1159 DYQTRLPLSS PRSEVMYLKP ASNNLTVPQG HAGCHTSFTG QGTNASETPA ENSBTAP00000013751/1-1162 DYQTRLPLSS PRSEVMYLKP ASNNLTVPQG HAGCHTSFTG QGTNASETPA BACU012150/1-861 DYQTRLPLSS PRSEVMYLKP SSNNLTVPQG HAGCHTSFTG QGTNASETPA ENSTTRP00000000209/1-1159 DYQTRLPLSS PRSEVMYLKP SSNNLTVPQG HAGCHTSFTG QGTNASETPA bmy_15366T0/1-1238 DYQTRLPLSS PRSEVMYLKP SSNNLTVPQG HAGCHTSFTG QGTNASETPA 851 900 ENSP00000367151/1-1159 TRMSII-QTD NFPAEPNYMG SRQQFVQSSS TFKDPERASL RDSGHGDSDQ ENSBTAP00000013751/1-1162 TRMSIIQQTD NFPAEPNYMG SRQQFVQSSS TFKDPERASL RDSGHGDSDQ BACU012150/1-861 TRMSII-QVG DF-------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 TRMSII-QTD NFPAEPNYMG SRQQFVQSSS TFKDPERASL RDSGHGDSDQ bmy_15366T0/1-1238 TRMSII-QTD NFPAEPNYMG SRQQFVQSSS TFKDPERASL RDSGHGDSDQ 901 950 ENSP00000367151/1-1159 ADSDQDTNKG SCCDMSVREA LKMKTTSTKS QPLEQ----- ---------- ENSBTAP00000013751/1-1162 ADSDQDTNKG SCCDMSVREA LKMKTTSTKS QPLEQ----- ---------- BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 ADSDQDTNKG SCCDMSVREA LKMKTTSTKS QPLEQ----- ---------- bmy_15366T0/1-1238 ADSDQDTNKG SCCDMSVREX LKMKTTSTKS QPLEQDLLAF YENTILILEY 951 1000 ENSP00000367151/1-1159 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013751/1-1162 ---------- ---------- ---------- ---------- ---------- BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 ---------- ---------- ---------- ---------- ---------- bmy_15366T0/1-1238 KKKTTDCIKL FKSSVLEGQI LPTLYIFKTS IICGCQYLCQ KIHSGRPIIM 1001 1050 ENSP00000367151/1-1159 ---------- --EPEECVNC TDECRVLGHS DRCWMPQFPA ANQAENADYR ENSBTAP00000013751/1-1162 ---------- --EPEECVNC TDECRVLGHS DRCWMPQFPA TNQAENADYR BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 ---------- --EPEECVNC TDECRVLGHS DRCWMPQFPA TNQAENADYR bmy_15366T0/1-1238 SKGSQTLETI PEEPEECVNC TDECRVLGHS DRCWMPQFPV TNQAENADYR 1051 1100 ENSP00000367151/1-1159 TNLFVPTVEA NVETETYETV NPTGKKTFCT FGKDKREHTI LIANVKPYLK ENSBTAP00000013751/1-1162 TNLFVPTVEA NVETETYETV NPTGKKTFCT FGKDKREHTI LIANVKPYLK BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 TNLFVPTVEA NVETETYETV NPTGKKTFCT FGKDKREHTI LIANVKPYLK bmy_15366T0/1-1238 TNLFVPTVEA NVETETYETV NPTGKKTFCT FGKDKREHTI LIANVKPYLK 1101 1150 ENSP00000367151/1-1159 AKRALSPLLQ EVPSASSSPT KACIEPCTST KGSLDGCEAK PGALAEASSQ ENSBTAP00000013751/1-1162 AKRALSPLLQ EVPSASSSPT KACIEPCTST KGSLDGCEAK PGALAEASGQ BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 AKRALSPLLQ EVPSASSSPT KACIEPCTST KGSLDGCEAK PGALAEASSQ bmy_15366T0/1-1238 AKRALSPLLQ EVPSASSSPT KACIEPCTST KGSLDGCEAK PGALAEASSQ 1151 1200 ENSP00000367151/1-1159 YLPTDSQYLS PSKQPRDPPF MASDQMARVF ADVHSRASRD SSEMGAVLEQ ENSBTAP00000013751/1-1162 YLPTDSQYLS PSKQPRDPPF LASEQMARVF ADVHSRASRD SNEMGTVLEQ BACU012150/1-861 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000209/1-1159 YLPTDSQYLS PSKQPRDPPF LASEQMARVF ADVHSRASRD SSEMGAVLEQ bmy_15366T0/1-1238 YLPTDSQYLS PSKQPRDPPF LASEQMARVF ADVHSRASRD SSEMGAVLEQ 1201 1250 ENSP00000367151/1-1159 LDHPNRDLGR ESVDAEEVVR EIDKLLQDCR GNDPVAVRK ENSBTAP00000013751/1-1162 LDHPGQDLGR ESVDAEEVVR EIDKLLQDCR GNDPVAVRK BACU012150/1-861 ---------- ---------- ---------- --------- ENSTTRP00000000209/1-1159 LDHSNRDLAR EPVDAEEVVR EIDKLLQDCR GNDPVAVRK bmy_15366T0/1-1238 LDHSNRDLAR EPVDAEEVVR EIDKLLQDCR GNDPVAVRK