KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:27 2014 Check: 00 .. Name: ENSP00000263409/1-1097 Len: 1127 Check: 3377 Weight: 1.00 Name: ENSBTAP00000013754/1-1095 Len: 1127 Check: 1475 Weight: 1.00 Name: ENSTTRP00000010986/1-1095 Len: 1127 Check: 637 Weight: 1.00 Name: bmy_07095T0/1-1066 Len: 1127 Check: 1755 Weight: 1.00 Name: BACU015007/1-1126 Len: 1127 Check: 6186 Weight: 1.00 // 1 50 ENSP00000263409/1-1097 ---------- ---------- ---------- MMDIYVCLKR PSWMVDNKRM ENSBTAP00000013754/1-1095 ---------- ---------- ---------- MMDISLCVKR PSWLVDRKRM ENSTTRP00000010986/1-1095 ---------- ---------- ---------- MMDISLCLKR PSRMGDSKRM bmy_07095T0/1-1066 MSGLTPAESR ANQSEVYFEF GGEQTDYIAQ MMDISLCLKR PSRMGDSKRM BACU015007/1-1126 MSGLTPAESR ANQSEVYFEF GGEQTDYIAQ MMDISLCLKR PSRMGDSKRM 51 100 ENSP00000263409/1-1097 RTASNFQWLL STFILLYLMN QVNSQKKGAP HDLKCVTNNL QVWNCSWKAP ENSBTAP00000013754/1-1095 RMASNSQWLL LTAVLLYLTN QVNSQKKSTP HDLKCVTNNL KVWDCSWRAL ENSTTRP00000010986/1-1095 RMTSNFQWLL LTVLLLYLMN QVNSQKRRTP RDLKCITNNL QVWDCSWSAP bmy_07095T0/1-1066 RMTSNFQWLL LTVLLLYLMN QVNSQKKRTP RDLKCITNNL QVWDCSWRAP BACU015007/1-1126 RMTSNFQWLL LTVLLLYLMN QVNSQKKRTP RDLKCITNNL QVWDCSWRAP 101 150 ENSP00000263409/1-1097 SGTGRGTDYE VCIENRSRSC YQLEKTSIKI PALSHGDYEI TINSLHDFGS ENSBTAP00000013754/1-1095 FGAGRAASYE VCIEKRSRTC YLLEK-NTTI PPLLPGHYEI TVHPLYEFGS ENSTTRP00000010986/1-1095 SGAGHGAAYE VCFENGSHSC YRLEK-NIKI PALLPGDHEI TINPLHDFGS bmy_07095T0/1-1066 SGAGHGAAYE VCFENGSHSC YRLEK-NIKI PALLPGDHEI TINPLHDFGN BACU015007/1-1126 SGAGHGAAYE VCFENGSHSC YRLEK-NIKL PALLPGDHEI TINPLHDFGN 151 200 ENSP00000263409/1-1097 STSKFTLNEQ NVSLIPDTPE ILNLSADFST STLYLKWNDR GSVFPHRSNV ENSBTAP00000013754/1-1095 SKSKFILNEK NISLIPETPE ILNLSADFST STLHLKWNDK GSVFPHYSNV ENSTTRP00000010986/1-1095 FISKFTLNEK NVSFIPDVPE IVDLSADFST STLHLKWNDK GSVFPHHSNV bmy_07095T0/1-1066 FISKFTLNEK NVSLIPDAPE ILDLSADFST SALHLKWNDK GSVFPHHSNV BACU015007/1-1126 FISKFTLNEK NVSLIPDAPE ILDLSADFST STLHLKWNDK GSVFPHHSNV 201 250 ENSP00000263409/1-1097 IWEIKVLRKE SMELVKLVTH NTTLNGKDTL HHWSWASDMP LECAIHFVEI ENSBTAP00000013754/1-1095 IWEIKVLHKK NMEIVKLVTY STTLNGRDTI HHWNWTSDMP LECAIHYVGI ENSTTRP00000010986/1-1095 IWEIKVLRKK NMEMVKSVTH NTTLNGRDTI HHWSWTSDMP LECATHYVGI bmy_07095T0/1-1066 IWEIKVLRKK NMEIVKLVTH NTTLNGRDTV HHWSWISDMP LECATHYVGI BACU015007/1-1126 IWEIKVLRKK NMEIVKLVTH NTTLNGRDTV HHWSWISDMP LECATHYVGI 251 300 ENSP00000263409/1-1097 RCYIDNLHFS GLEEWSDWSP VKNISWIPDS QTKVFPQDKV ILVGSDITFC ENSBTAP00000013754/1-1095 RCYIDDPQFS GHKEWSDWSL LKNISLPPDS QTKVFPQDKV ILAGSDITVC ENSTTRP00000010986/1-1095 RCYIDDPQFS GRKEWSDWSP LKNISWSPDS QTKVFPQDRV LLVGSDITVC bmy_07095T0/1-1066 RCYIDDPQFS GRKEWSDWSP LKNVSWSPDS QTKVFPQDRV LLVGSDITVC BACU015007/1-1126 RCYIDDPQFS GRKEWSDWSP LKNISWSPDS QTKVFPQDRV LLVGSDITVC 301 350 ENSP00000263409/1-1097 CVSQEKVLSA LIGHTNCPLI HLDGENVAIK IRNISVSASS GTNVVFTTED ENSBTAP00000013754/1-1095 CVTQEKVLSA QIGSTHCPLI HLDGENVAIR IRNISASASS GTNVVFSVED ENSTTRP00000010986/1-1095 CVTQEKVLSA QIGSTYCPLI HLDGENVAIK IRNISASESS GTNVVFSVED bmy_07095T0/1-1066 CVTQEKVLSA QIGSTYCPLI HLDGKNVAIK IRNISASESS GTNVVFSVED BACU015007/1-1126 CVTQEKVLSA QIGSTYCPLI HLDGKNVAIK IRNISASESS GTNVVFSVED 351 400 ENSP00000263409/1-1097 NIFGTVIFAG YPPDTPQQLN CETHDLKEII CSWNPGRVTA LVGPRATSYT ENSBTAP00000013754/1-1095 NIFGTVVFAG YPPDIPQKLN CETYDLKEII CTWNPGRPTS LEGPRSTSYT ENSTTRP00000010986/1-1095 NMFGTVIFAG YPPDIPQKLN CETYDLKEII CTWNPGRPTF LVGPRNTSYT bmy_07095T0/1-1066 NMFGTVIFAG YPPDIPQKLN CETYDLKEII CTWNPGRPTF LVGPRNTSYT BACU015007/1-1126 NMFGTVIFAG YPPDIPQKLN CETYDLKEII CTWNPGRPTF LVGPRNTSYT 401 450 ENSP00000263409/1-1097 LVESFSGKYV RLKRAEAPTN ESYQLLFQML PNQEIYNFTL NAHNPLGRSQ ENSBTAP00000013754/1-1095 LFESFSGKYV RFKGDEVSAN ENYQLFFQIL SSQEIHNFTL NAQNLLGQTE ENSTTRP00000010986/1-1095 LFESFSGKYV RFKRVELPTN ESYQLFFQML PNQEIYNFTL NARNPLGQSE bmy_07095T0/1-1066 LFESFSGKYV RFKRVELPTN ESYQLFFQML PNQEIYNFTL NARNPLGQSE BACU015007/1-1126 LFESFSGKYV RFKRVELPTN ESYQLFFQML PNQEIYNFTL NARNPLGQSE 451 500 ENSP00000263409/1-1097 STILVNITEK VYPHTPTSFK VKDINSTAVK LSWHLPGNFA KINFLCEIEI ENSBTAP00000013754/1-1095 STLLVNITEK VHPRIPTSLK AKDINSTAVI LSWHLPGNFT KVKLLCQIEI ENSTTRP00000010986/1-1095 STLLVNITEK VHPHIPTSIK VKDISSTAVT LSWHLPGSFA KIKLLCQIEI bmy_07095T0/1-1066 STLLVNITEK VHPHIPTSVK VKDISSTAVT LSWHLPGSFA KIKLLCQIXI BACU015007/1-1126 STLLVNITEK VHPHIPTSVK VKDISSTAVT LSWHLPGSFA KIKLLCQIEI 501 550 ENSP00000263409/1-1097 KKSNSVQEQR NVTIKGVENS SYLVALDKLN PYTLYTFRIR CSTETFWKWS ENSBTAP00000013754/1-1095 NKTNSEHELR NVTMRGVESS NYLTTVDKLN PYTIYTFRIR CSTDPFWKWS ENSTTRP00000010986/1-1095 NKTNSVHEXX XXXXXXXXXX XXXXXXXXXX -XXXXXXXXX XXXXXXXXXX bmy_07095T0/1-1066 NKTNSVHELR NVTMRGIENS SYLAAVDKLN PYTVYTFRIR CCADPFWKWS BACU015007/1-1126 NKTNSIHELR NVTMRGIENS SYLAALDKLN PYTIYTFRIR CCTDPFWKWS 551 600 ENSP00000263409/1-1097 KWSNKKQHLT TEASPSKGPD TWREWSSDGK NLIIYWKPLP INEANGKILS ENSBTAP00000013754/1-1095 KWSNEKQCLT TEAIPSKGPD IWREWSSDGR NLIIYWKPLP INEAYGKILS ENSTTRP00000010986/1-1095 XXXXXXXXXX XXXIPSKGPD TWREWSSDGK NLIIYWKPLP INEANGKILS bmy_07095T0/1-1066 KWSNEKQYLT TEAIPSKGPD TWREWSSDGK NLIIYWKPLP INEANGKILS BACU015007/1-1126 KWSNEKQYLT TEAIPSKGPD TWREWSSDGK NLIIYWKPLP INEANGKILS 601 650 ENSP00000263409/1-1097 YNVSCSSDEE TQSLSEIPDP QHKAEIRLDK NDYIISVVAK NSVGSSPPSK ENSBTAP00000013754/1-1095 YNVSYSSDEE TKSLSEIPDT QHRAELQLDK NDYIISVVAK NSAGSSPPSK ENSTTRP00000010986/1-1095 YNVSCSSDEE TQSLSEIPDP QHKAEIQLDK SDYIISVVAK NSVGSSPPSK bmy_07095T0/1-1066 YNVSCSSDEE TQSLSEIPDP QHKAEIQLDK NDYIISVVAK NSVGSSPPSK BACU015007/1-1126 YNVSCSSDEE TQSLSEIPDP QHKAEIQLDK NDYIISVVAK NSVGSSPPSK 651 700 ENSP00000263409/1-1097 IASMEIPNDD LKIEQVVGMG KGILLTWHYD PNMTCDYVIK WCNSSRSEPC ENSBTAP00000013754/1-1095 IASMEIPNDD LKIEQALGMG NRILLTWNYD PNMTCDYVIK WCNSSQSGPC ENSTTRP00000010986/1-1095 IASMEIPNDD LKIEQAVGMG NGILLTWNYD PNVTCDYVIK WCNSSRSEPC bmy_07095T0/1-1066 IASMEIPN-- ---------- ---------- ---------- ---------- BACU015007/1-1126 IASMEIPNDD LKIEQAVRMG NGILLTWNYD PNVTCDYVIK WCNSSRSEPC 701 750 ENSP00000263409/1-1097 LMDWRKVPSN STETVIESDE FRPGIRYNFF LYGCRNQGYQ LLRSMIGYIE ENSBTAP00000013754/1-1095 LMDWKKVPPN STETVIESDQ FRPGVRYNFS VYGCRNQGYQ LLRSVIGYVE ENSTTRP00000010986/1-1095 LMDWKKVPSN STETVIESDQ FRPGVRYNFF VYVCRNQGYQ LLRSIIGYVE bmy_07095T0/1-1066 ---------- --------DQ FRPGVRYNFF VYGCRNQGYQ LLRSIIGYVE BACU015007/1-1126 LMDWKKVPSN STETIIESDQ FRPGVRYNFF VYGCRNQGYQ LLRSIIGYVE 751 800 ENSP00000263409/1-1097 ELAPIVAPNF TVEDTSADSI LVKWEDIPVE ELRGFLRGYL FYFGKGERDT ENSBTAP00000013754/1-1095 ELAPAVAPNF TVEDTSADSI LVKWEEIPVE ELRGFLRGYL FYFEKGERDT ENSTTRP00000010986/1-1095 ELAPVVAPNF TVEDTSADSI LVKWEEIPVE ELRGFLRGYL FYFEKGERDT bmy_07095T0/1-1066 ELAPVVAPNF TVEDTSADSI LVKWEEIPVE ELRGFLRGYL FYFEKGERDT BACU015007/1-1126 ELAPVVAPNF TVEDTSADSI LVKWEEIPVE ELRGFLRGYL FYFEKGERDT 801 850 ENSP00000263409/1-1097 SKMRVLESGR SDIKVKNITD ISQKTLRIAD LQGKTSYHLV LRAYTDGGVG ENSBTAP00000013754/1-1095 SKIMGLEPGR FDTKVKNITD ISQKTLRIAD LQGKTSYHLV LRAYTGGGMG ENSTTRP00000010986/1-1095 SKMRVLESGR SDIKVKNITD ISQKTLRIAD LQGKTSYHLV LRAYTDGGMG bmy_07095T0/1-1066 SKMRVLESGR SDIKVKNITD ISQKTLRIAD LQGKTSYHLV LRAYTDGGMG BACU015007/1-1126 SKMRVLESGR SDIKVKNITD ISQKTLRIAD LQGKTSYHLV LRAYTDGGMG 851 900 ENSP00000263409/1-1097 PEKSMYVVTK ENSVGLIIAI LIPVAVAVIV GVVTSILCYR KREWIKETFY ENSBTAP00000013754/1-1095 PERSMFVVTK ENSEGLIIAI LIPVAVAVII GVVTSILCYR KREWIKETFY ENSTTRP00000010986/1-1095 PEKSMFVVTK ENSVALIIAI LIPDELPVIV GVVTSILCYR KREWIKETFY bmy_07095T0/1-1066 PEKSMFVVTK ENSVGLIIAI LIPVAVAVIV GVVTSILCYR KREWIKETFY BACU015007/1-1126 PEKSMFVVTK ENSVGLIIAI LIPVAVAVIV GVVTSILCYR KREWIKETFY 901 950 ENSP00000263409/1-1097 PDIPNPENCK ALQFQKSVCE GSSALKTLEM NPCTPNNVEV LETRSAFPKI ENSBTAP00000013754/1-1095 PDIPNPENCK ALQFQKSVCE GNSALKTLEM NPCTPNNVEV LETRSVALKI ENSTTRP00000010986/1-1095 PDIPNPENCK ALQFQKSVCE GNSALKTLEM NPCTPNNVEV LETRSTVPKI bmy_07095T0/1-1066 PDIPNPENCK ALQFQKSVCE GNSALKTLEM NPCTPNNVEV LETRSTVPKI BACU015007/1-1126 PDIPNPENCK ALQFQKSVCE GNSALKTLEM NPCTPNNVEV LETRSTVPKI 951 1000 ENSP00000263409/1-1097 EDTEIISPVA ERPEDRSDAE PENHVVVSYC PPIIEEEIPN PAADEAGGTA ENSBTAP00000013754/1-1095 EDTEIISPVA ERPEDRSDAE PENHVVVSYC PPVIEEELAN PGA-EGGGAS ENSTTRP00000010986/1-1095 EDTEIISPVA ERPEDNTDVQ PENHVVVSYC PPVIEEEIVN PGADEAGGAS bmy_07095T0/1-1066 EDTEIISPVA ERPEDSTDAQ PENHVVVSYC PPVIEEEIVN PGADEAGGAS BACU015007/1-1126 EDTEIISPVA ERPEDSTDAQ LENHVVVSYC PPVIEEEIVN PGADEAGGAS 1001 1050 ENSP00000263409/1-1097 QVIYIDVQSM YQPQAKPEEE QENDPVGGAG YKPQMHLPIN STVEDIAAEE ENSBTAP00000013754/1-1095 QVIYIDVQSM YQPQAKPEGE LDSDPVGGAG YKPQMHLPVT STVDDLDADD ENSTTRP00000010986/1-1095 QVIYIDIQSM YQPQAKPEEE PKNDPVGGTG YKPQMHLLVT STVEDLAADD bmy_07095T0/1-1066 QVIYIDIQSM YQPQAKPEEE PENDLVGGTG YKPQMHLLVT STVEDLAADD BACU015007/1-1126 QVIYIDIQSM YQPQAKPEEE PENDPVVGTG YKPQMHLLVT STVEDLAADD 1051 1100 ENSP00000263409/1-1097 DLDKTAGYRP QANVNTWNLV SPDSPRSIDS NSEIVSFGSP CSINSRQFLI ENSBTAP00000013754/1-1095 DLDKTAGYRP QANVNTWNLV SPDSPRSTDS NSEIVSFGSP CSINSRQFLI ENSTTRP00000010986/1-1095 DLDKTAGYRP QANVNTWNLV SPDSPRSTDS NSEIVSFGSP CSINSRQFLI bmy_07095T0/1-1066 DLDKTAGYRP QANVNTWNLV SPDSPRSTDS NSEIVSFGSP CSINSRQFLI BACU015007/1-1126 DLDKTAGYRP QANVNTWNLV SPDSPRSTDS NSEIVSFGSP CSINSRQFLI 1101 1150 ENSP00000263409/1-1097 PPKDEDSPKS NGGGWSFTNF FQNKPND ENSBTAP00000013754/1-1095 PPKDEDSPKS SGGGWSFTNF FQNKPND ENSTTRP00000010986/1-1095 PPKDEDSPKS NGGGWSFTNF FQNKPND bmy_07095T0/1-1066 PPKDEDSPKS NGGGWSFTNF FQNKPND BACU015007/1-1126 PPKDEDSPKS NGGGWSFTNF FQNKPND