KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:28 2014 Check: 00 .. Name: ENSP00000375978/1-732 Len: 996 Check: 37 Weight: 1.00 Name: bmy_16453T0/1-524 Len: 996 Check: 3193 Weight: 1.00 Name: ENSBTAP00000013758/1-733 Len: 996 Check: 7552 Weight: 1.00 Name: ENSTTRP00000008535/1-733 Len: 996 Check: 3918 Weight: 1.00 Name: BACU012683/1-902 Len: 996 Check: 6995 Weight: 1.00 // 1 50 ENSP00000375978/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013758/1-733 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008535/1-733 ---------- ---------- ---------- ---------- ---------- BACU012683/1-902 MAAALALDGE STLGRRKKKK KESRPESIII YRSESEKLDE EPGELEGGDQ 51 100 ENSP00000375978/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013758/1-733 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008535/1-733 ---------- ---------- ---------- ---------- ---------- BACU012683/1-902 PKEEEGDDFL DYPADDAMWN MPVDSRYVTL TGTITRGKKK GQMVDIHVTL 101 150 ENSP00000375978/1-732 ---------- -------MVR SGNKA----- ---------- ---------- bmy_16453T0/1-524 ---------- -------MAR SGNKA----- ---------- ---------- ENSBTAP00000013758/1-733 ---------- -------MAR SWDKA----- ---------- ---------- ENSTTRP00000008535/1-733 ---------- -------MAR SGNKX----- ---------- ---------- BACU012683/1-902 TEKELQELTK PKVSSREMAP EGRKACQLGA DRGPHVVLWT LACLPVVFIL 151 200 ENSP00000375978/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013758/1-733 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008535/1-733 ---------- ---------- ---------- ---------- ---------- BACU012683/1-902 SFVVSFYYGT ITWYSIFLVY NEERTFWHKI SCCPCLILLY PVLIMAMASS 201 250 ENSP00000375978/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013758/1-733 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008535/1-733 ---------- ---------- ---------- ---------- ---------- BACU012683/1-902 LGLYAAVVQL SWSWGAWWQA ARDMEKGFCG WLCSKLGLED CSPYSIVELL 251 300 ENSP00000375978/1-732 ---------- --------AV VLCMDVGFTM SNSIPGIESP FEQAKKVITM bmy_16453T0/1-524 ---------- --------AV VLCMDVRFAM SNSFPGEESP FELAKKVMTM ENSBTAP00000013758/1-733 ---------- --------AV VLCMDVGLAM SNSFPGEESP FELAKKVMTM ENSTTRP00000008535/1-733 ---------- --------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU012683/1-902 ESDNISGTLS NKDATQEAAV VLCMDVRFAM SNSFPGEESP FELAKKVMTM 301 350 ENSP00000375978/1-732 FVQRQVFAEN KDEIALVLFG TDGTDNPLSG GDQYQNITVH RHLMLPDFDL bmy_16453T0/1-524 FVQRQVFAES KDEIALVLFG TDGTENALAG EDQYQNITVR RHLMLPDFDL ENSBTAP00000013758/1-733 FVQRQVFAEN KDEVALVLFG TDGTKNALAA GDQYQNITVH RHLMRPDFDL ENSTTRP00000008535/1-733 XXXXXVFAES KDEIALVLFG TDGTENALAG EGQYQNITVH RHLMLPDFDL BACU012683/1-902 FVQRQVFAES KDEIALVLFG TDGTENALAG EDQYQNITVH RHLMLPDFDL 351 400 ENSP00000375978/1-732 LEDIESKIQP GSQQADFLDA LIVSMDVIQH ETIGKKFEKR HIEIFTDLSS bmy_16453T0/1-524 LEDIESKIQP GSQQADCI-- ------LFQP EKTLKKFP-- ---------- ENSBTAP00000013758/1-733 LEDIESKIQP GSQQADLLDA LIVCMDLIQE ETLGKKFEKR HIEVFTDLSS ENSTTRP00000008535/1-733 LEDIESKIQP GSQQADFLDA LIVCMDLIQQ ETVGKKFEKR HIEVFTDLSS BACU012683/1-902 LEDIESKIQP GSQQADF--- ---------- ---------- ---------- 401 450 ENSP00000375978/1-732 RFSKSQLDII IHSLKKCDIS LQFFLPFSLG KEDGSGDRGD GPFRLGGHGP bmy_16453T0/1-524 ---------L IWGILSSGC- -----PHCVH GFDSTRNCLD WTFLTFHFHL ENSBTAP00000013758/1-733 PFSRDQLDII IHNLKKSGIS LQFFLPFPIG KQGGTGDRGD GSLLSDHHGP ENSTTRP00000008535/1-733 PFSRDQLGII IHNLKKSGIS LQFFLPFPVG KEDGTGDGGD GNLLSDHHGS BACU012683/1-902 ---------- ---------- ---------G KEDGTGDRGD GHLLSDHHGP 451 500 ENSP00000375978/1-732 SFPLKGITEQ QKEGLEIVKM VMISLEGEDG LDEIYSFSES LRKLCVFKKI bmy_16453T0/1-524 NRPFF-LVDA LETAIAWCKP DVPY----PA RWKLF-FIES LRQLCIFKKI ENSBTAP00000013758/1-733 SFPPKGITEQ QKEGIQMVKK VMMSLEGEDG LEEIYSFSEA LRQLCVFKKT ENSTTRP00000008535/1-733 SFPPKGISEQ QKEGIRMVKK VMMSLEGEDG LEEIYSFSES LRQLCVFKKI BACU012683/1-902 SFPLKGISEQ QKEGIRMVKK VMMSLEGEDG LEEIYSFSES LRQLCVFKKI 501 550 ENSP00000375978/1-732 ERHSIHWPCR LTIGSNLSIR IAAYKSILQE RVKKTWTVVD AKTLKKEDIQ bmy_16453T0/1-524 ERRSIPWPCQ LTIGSNLSIK IVAYKSILQE KVKKCWTVVD ARTQKKEDIQ ENSBTAP00000013758/1-733 ERRSMPWSCQ LTIGSNLSIK IVAYKSITQE KVKKCWTVVD ARTLKKEAIQ ENSTTRP00000008535/1-733 ERRSMPWPCQ LTIGSNLSIK IVAYKSILQE RVKKCWTVVD ARTQKKEDIQ BACU012683/1-902 ERRSVPWPCQ LTIGSNLSIK IVAYKSILQE KVKKCWTVVD ARTQKKEDIQ 551 600 ENSP00000375978/1-732 KETVYCLNDD DETEVLKEDI IQGFRYGSDI VPFSKVDEEQ MKYKSEGKCF bmy_16453T0/1-524 KETVYCLNDD DETEVPKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF ENSBTAP00000013758/1-733 KETVYCLNDD DETEVSKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF ENSTTRP00000008535/1-733 RETVYCLNDD DETEVPKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF BACU012683/1-902 KETVYCLNDD DETEVPKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF 601 650 ENSP00000375978/1-732 SVLGFCKSSQ VQRRFFMGNQ VLKVFAARDD EAAAVALSSL IHALDDLDMV bmy_16453T0/1-524 SVLGFCRSSQ VHMKYFMGNQ VLKVFAAKDD EAAAVALSSL IHALDELDMV ENSBTAP00000013758/1-733 SVLGFCRSSQ VHMKYFMGNQ VLKVFAAKDD EASEVTLSSG YHMKQELDSA ENSTTRP00000008535/1-733 SVLGFCRSSQ VHMKYFMGXX XXXXXXXXXX XAAAVALSSL IHALDELDMV BACU012683/1-902 SVLGFCRSSQ VHMKYFMGNQ VLKVFAAKDD EAAAVALSSL IHALDELDMV 651 700 ENSP00000375978/1-732 AIVRYAYDKR ANPQVGVAFP HIKHNYECLV YVQLPFMEDL RQYMFSSLKN bmy_16453T0/1-524 AVVRYAYDRR ANPQVGVAFP YIRDAYECLV YVQLPFMEDL RQYMFSSLKN ENSBTAP00000013758/1-733 SCQRINWNQQ SDVEEGSAYP LQYSCWECLV YIQLPFMEDL RQYMFPSLKN ENSTTRP00000008535/1-733 AIVRYAYDRR ANPQVGVAFP YIRDAYECLV YVQLPFMEDL RQYMFSSLKN BACU012683/1-902 AVVRYAYDRR ANPQVGVAFP YIRDAYECLM YVQLPFMEDL RQYMFSSLKN 701 750 ENSP00000375978/1-732 SKKYAPTEAQ LNAVDALIDS MSLAKKDEKT DTLEDLFPTT KIPNPRFQRL bmy_16453T0/1-524 NGKCTPTEAQ LSAVDALIDS MSLVKKDEEE GTIEDLFPTS KIPNPQFQRL ENSBTAP00000013758/1-733 NRKCTPTEAQ LSAVDALIDS MSLVQKDEEE GTIEDLFPTS KIPNPQFQRL ENSTTRP00000008535/1-733 NRKCIPTEAQ LSAVDALIDS MSLVKKDEEE GTIEDLFPTS KIPNPQFQRL BACU012683/1-902 NGKCTPTEAQ LSAVDALIDS MSLVKKDEEE GTIEDLFPTS KIPNPQFQRL 751 800 ENSP00000375978/1-732 FQCLLHRALH PREPLPPIQQ HIWNMLNPPA EVTTKSQIPL SKIKTLFPLI bmy_16453T0/1-524 FQ-------- ---------- ---------- ---------- ---------- ENSBTAP00000013758/1-733 FQCLLHRALH PQEPLPPIQQ HILSMLDPPT EVTAKCQVPL SKIKTLFPLT ENSTTRP00000008535/1-733 FQCLLHRALH PQEPLPPIQQ HVLNMLDPPT EVTAKCQVPV SKIKTLFPLT BACU012683/1-902 FQCLLHRALH PQEPLPPIQR HILDMLDPPT EVTAKCQVPV SKIKTLFPLT 801 850 ENSP00000375978/1-732 EA-KKKDQVT AQEIFQDNHE DGPTAKKLKT EQGGAHFSVS SLAEGSVTSV bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ---------V ENSBTAP00000013758/1-733 EVIKKKNQVT GQDIFQDNHE EGPTCKKLKT EEEEAHFSVS SLAEGSVTCV ENSTTRP00000008535/1-733 EVLKKKDQVT AQDIFPDNHE EGPTSKKLKT EGDEAHFSVS SLAEGSVTRV BACU012683/1-902 EVLKKKDQVT AQDIFQDNHE EGPTSKKLRT EGEEAHFSIS SLAEGSVTRV 851 900 ENSP00000375978/1-732 GSVNPAENFR VLVKQKKASF EEASNQLINH IEQFLDTNET PYFMKSIDCI bmy_16453T0/1-524 GSVNPAENFR VLVRQKKTSF EEASHQLINH IEQFLDTNET LYFMKSMDCI ENSBTAP00000013758/1-733 GSVNPAENFR VLVRQKKATF EEASHQLINH IEQFLDTNET LYFMKSMDCI ENSTTRP00000008535/1-733 GSVNPAENFR VLVRQKKTSF EEASHQLINH IEQFLDTNET LYFMKSMDCI BACU012683/1-902 SRT------- ---------- --SSHQLINH IEQFLDTNET LYFMKSMDCI 901 950 ENSP00000375978/1-732 RAFREEAIKF SEEQRFNNFL KALQEKVEIK QLNHFWEIVV QDGITLITKE bmy_16453T0/1-524 RVFREEAIQH ---------- --IAERKNIR KVKX------ ---------- ENSBTAP00000013758/1-733 KAFREEAIQF SEEQRFNNFL KALREKVEVK QLNHFWEIVV HDGVTLITKD ENSTTRP00000008535/1-733 RVFREEAIQF SEEQHFNSFL KALREKVEVK QLNHFWEIVI QDGITLITKD BACU012683/1-902 RVFREEAIQF SEEQHFNSFL KALREKVEVK QLNHFWEIVI QDGITLITKD 951 1000 ENSP00000375978/1-732 EASGSSVTAE EAKKFLAPKD KPSGDTAAVF EEGGDVDDLL DMI--- bmy_16453T0/1-524 ---------- ---------- ---------- ---------- ------ ENSBTAP00000013758/1-733 EAPGSSVTTE EAKKFLAPKE NANADSAAAF EEGGDVDDLL ELI--- ENSTTRP00000008535/1-733 EASGSSVTAE EAKKFLAPKE NPDEDTAAVC EEGGDVDDLL DLI--- BACU012683/1-902 EASGSSVTAE EAKKVLRGSS LS-------- -----LDELL QWILFS