KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:29 2014 Check: 00 .. Name: ENSP00000271764/1-584 Len: 641 Check: 2266 Weight: 1.00 Name: ENSTTRP00000011473/1-584 Len: 641 Check: 7706 Weight: 1.00 Name: ENSBTAP00000013769/1-578 Len: 641 Check: 5875 Weight: 1.00 Name: bmy_02368T0/1-605 Len: 641 Check: 6794 Weight: 1.00 Name: BACU016491/1-504 Len: 641 Check: 8938 Weight: 1.00 // 1 50 ENSP00000271764/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011473/1-584 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013769/1-578 ---------- ---------- ---------- ---------- ---------- bmy_02368T0/1-605 AAAKLRGPGF QPGPFPSRAQ AWLPPGLRVG KPPCSRFPDS PWLLWSPSLP BACU016491/1-504 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000271764/1-584 ------MFAK AFRVKSNTAI KGSDRRKLRA DVTTAFPTLG TDQVSELVPG ENSTTRP00000011473/1-584 ------MFAK AFRVKSNTAI KGSDRRKLRA DVTAVFPTLG TDQVSELVPG ENSBTAP00000013769/1-578 ------MFAK AFRVKSNTAI KGSDRRKLRA DVAAVFPTLG TDQVSELVPG bmy_02368T0/1-605 QATPADMFAK AFRVKTNTAI KGSDRRKLRA DVTAVFPTLG TDQVSELVPG BACU016491/1-504 ------MFAK AFRVKSNTAI KGSDRRKLRA DVTAVFPTLG TDQVSELVPG 101 150 ENSP00000271764/1-584 KEELNIVKLY AHKGDAVTVY VSGGNPILFE LEKNLYPTVY TLWSYPDLLP ENSTTRP00000011473/1-584 KEELNIVKLY AHRGDAVTVY VSGGNPILFE LEKNLYPTVY TLWSYPDLLP ENSBTAP00000013769/1-578 KEELNIVKLY AHRGDAVTVY VSGGNPILFE LEKNLYPTVY TLWSYPDLLP bmy_02368T0/1-605 KEELNIVKLY AHRGDAVTVY VSGGNPILFE LEKNLYPTVY TLWSYPDLLP BACU016491/1-504 KEELNIVKLY AHRGDAVTVY VSGGNPILFE LEKNLYPTVY TLWSYPDLLP 151 200 ENSP00000271764/1-584 TFTTWPLVLE KLVGGADLML PGLVMPPAGL PQVQKGDLCA ISLVGNRAPV ENSTTRP00000011473/1-584 TFTTWPLVLE KLVGGADLML PGLVVPPAGL PQVQKGDLCA IALVGNRAPV ENSBTAP00000013769/1-578 TFTTWPLVLE KLVGGADLML PGLVVPPAGL PQVQKGDLCA VALVGNRAPV bmy_02368T0/1-605 TFTTWPLVLE KLVGGADLML PGLVVPPAGL PQVQKGDLCA IALVGNR--- BACU016491/1-504 TFTTWPLVLE KLVGGADLML PGLVVPPAGL PQVQKGDLCA IALVGNR--- 201 250 ENSP00000271764/1-584 AIGVAAMSTA EMLTSGLKGR GFSVLHTYQD HLWRSGNKSS PPSIAPLALD ENSTTRP00000011473/1-584 AIGVAAMSTA EMLTSGLKGR GFSVLHTYQD HLWRSGDKSS PPSIAPLALD ENSBTAP00000013769/1-578 AVGVAAMSTA EMLASGLKGR GFCVLHSYQD HLWRSGDKSS PPSIAPLALN bmy_02368T0/1-605 ---------- ---------- ---------- ---RSGDKSS PPSIAPLALD BACU016491/1-504 ---------- ---------- ---------- ---------- ----APVAIG 251 300 ENSP00000271764/1-584 SADLSEEKGS VQMDSTLQGD MRHMTLEGEE -ENGEVHQAR EDKSLSEAPE ENSTTRP00000011473/1-584 PPDLSEEKGS VQADTTLQGD MRRLTLEGEE -EEGEVQQRC GEKSLSEATE ENSBTAP00000013769/1-578 PPDLSEGKGC VKADTALQGA MRQLTL---- --EEEVQQRC EEKSPSEATE bmy_02368T0/1-605 PPDLSEENGS VQADSTVQGD MRRLTLKGEE QEEGEVQQRC GEKSLSEATE BACU016491/1-504 VAAMS----- ---------- ---------- ---------T AEMLTSEATE 301 350 ENSP00000271764/1-584 DTSTRGLNQD STDSKTLQEQ MDELLQQCFL HALKCRVKKA DLPLLTSTFL ENSTTRP00000011473/1-584 DPSVGTLNPD PTDSKTLQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013769/1-578 DPGPGGLHVD PMDSKTLQEQ MDELLQTCFL HALKCSVRKA DLPLLTSTLL bmy_02368T0/1-605 DPSVGGLNPD PTDSKTLQEQ MDELLQRCFL RALKYRVKKA DLPLLTSTLL BACU016491/1-504 DPSVGGLNPD PTDSKTLQEQ MDELLQRCFL RALKYRVKKA DLPLLTSTLL 351 400 ENSP00000271764/1-584 GSHMFSCCPE GRQLDIKKSS YKKLSKFLQQ MQQEQIIQVK ELSKGVESIV ENSTTRP00000011473/1-584 XXXXXXXXPE GRQLDIKKSS YKKLSKFLQH MQQEQIIQVQ ELSKGVESIV ENSBTAP00000013769/1-578 GSHMFSCCPE GRQLDIKKSS YKKLSKFLQH MQQEQIIQVQ ELSKGVESIV bmy_02368T0/1-605 GSHMFSCCPE GRQLDIKKSS YKKLSKFLQH MQQEQIIQVQ ELSTGVESVV BACU016491/1-504 GSHMFSCCPE GRQLDIKKSS YKKLSKFLQH MQQEQIIQVQ ELSKGVESVV 401 450 ENSP00000271764/1-584 AVDWKHPRIT SFVIPEPSPT SQTIQEGSRE QPYHPPDIKP LYCVPASMTL ENSTTRP00000011473/1-584 AVDWKHPRIT SFVIPEPSPT SQTIQEGSRE QPYHPPDIKS LYCVPASMTL ENSBTAP00000013769/1-578 -VDWKHPRIT SFVIPEPSPT SQTIQEGSRE QPYHPPDIKP LYCVPASMTL bmy_02368T0/1-605 AVDWKHPRIT SFVIPEPSPT SQTIQEGSRE QPYHPPDIKS LYCVPASMTL BACU016491/1-504 AVDWKHPRIT SFVIPEPSPT SQTIQEGSRE QPYHPPDIKS LYCVPASMTL 451 500 ENSP00000271764/1-584 LFQESGHKKG SFLEGSEVRT IVINYAKKND LVDADNKNLV RLDPILCDCI ENSTTRP00000011473/1-584 LFQESGHKKG SILEGSEVRT IVINYAKKND LVDADNKNLV KLDPILCDCI ENSBTAP00000013769/1-578 LFQESGHKKG SVLEGSEVRT FVINYAKKND LVDADNKNLV KLDPILCDCI bmy_02368T0/1-605 LFQESGHKKG SILEGSEVRT IVINYAKKND LVDADNKNLV KLDPILCDCI BACU016491/1-504 LFQESGHKKG SILEGSEVRT IVINYAKKND LVDADNKNLV KLDPILCDCI 501 550 ENSP00000271764/1-584 LEKNEQHTVM KLPWDSLLTR CLEKLQPAYQ VTLPGQEPIV KKGRICPIDI ENSTTRP00000011473/1-584 LEKGEQHTVM KLPWDSLLNR CLEKLQPAYQ VTFPGQEPIV KKGKICPIDI ENSBTAP00000013769/1-578 LEKDEQHTVT KLPWDSLLGR CLEKLQPAYQ VTFPGQEPIV KKGRICPIDI bmy_02368T0/1-605 LEKGEQHTVM KLPWDSLLNR CLEKLQPAYQ VTFPGQEPIV KKGKICPIDI BACU016491/1-504 LEKGEQHTVM KLPWDSLLNR CLEKLQPAYQ VTFPGQEPIV KKGKICPIDI 551 600 ENSP00000271764/1-584 TLAQRASNKK VTVVRNLEAY GLDPYSVAAI LQQRCQASTT VNPAPGAKDS ENSTTRP00000011473/1-584 TLAQRASNKK VTVVRNLEAY GLDPCSVATI LQQRCQASTT VTPAPGTKDI ENSBTAP00000013769/1-578 TLAQKASNKK VTVVRNLEAY GLDPRSVAAT LQQRCQASTT VTSAPGLKDS bmy_02368T0/1-605 TLAQRASNKK VTVVRNLEAY GLDPCSVATI LQQRCQASTT VTPAPGTKDI BACU016491/1-504 TLAQRASNKK VTVVRNLEAY GLDPCSVATI LQQRCQASTT VTPAPGTKDI 601 650 ENSP00000271764/1-584 LQVQIQGNQV HHLGWLLLEE YQLPRKHIQG LEKALKPGKK K ENSTTRP00000011473/1-584 LQVQIQGNQI HHLGRLLLEE YRLPRKHIQG LEKAPKPGKK K ENSBTAP00000013769/1-578 VQVQIQGNQI HHLGRLLLEE YRLPRKHIQG LEKAPKPGKK K bmy_02368T0/1-605 LQVQIQGNQI HHLGRLLLEE YRLPRKHIQG LEKAPKPGKK K BACU016491/1-504 LQVQIQGNQI HHLGRLLLEE YRLPRKHIQG LEKAPKPGKK K