KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:29 2014 Check: 00 .. Name: ENSBTAP00000013784/1-335 Len: 361 Check: 4455 Weight: 1.00 Name: ENSP00000359699/1-361 Len: 361 Check: 8428 Weight: 1.00 Name: ENSTTRP00000005500/1-360 Len: 361 Check: 8630 Weight: 1.00 Name: bmy_22464T0/1-357 Len: 361 Check: 4950 Weight: 1.00 Name: BACU004600/1-319 Len: 361 Check: 6616 Weight: 1.00 // 1 50 ENSBTAP00000013784/1-335 ----MTARLL GTLLTVLFLG LFGILEATKI SCRSEEGEAV DWFTFYKLPK ENSP00000359699/1-361 MKQKMMARLL RTSFALLFLG LFGVLGAATI SCRNEEGKAV DWFTFYKLPK ENSTTRP00000005500/1-360 -RRKMTARLL RTPLALLFLG LFGILKATTI SCRNEEGEAV DWFTFYKLPK bmy_22464T0/1-357 ----MTARLL KAPLALLFLG LFGIVKATTI SCRNEEGEAV DWFTFYKLPK BACU004600/1-319 ---------- ---------- ---------- ---------- --FTFYKLPK 51 100 ENSBTAP00000013784/1-335 KQNEESRETG LEYLYLDSTT RSWSRSKQLM NATKSVLGRT LQQLYEASAS ENSP00000359699/1-361 RQNKESGETG LEYLYLDSTT RSWRKSEQLM NDTKSVLGRT LQQLYEAYAS ENSTTRP00000005500/1-360 RQDKESRETG VEYLYLDSAT RSWRRSKQLM NTTKSVLGRT LQQLYEAYAS bmy_22464T0/1-357 RQDKESRETG VEYLYLDSAT RSWRRSKQLM NTTKSVLGRT LQQLYEAHAS BACU004600/1-319 RQDKESRETG VEYLYLDSAT RSWRRSKQLM NTTKSVLGRT LQQLYEAHAS 101 150 ENSBTAP00000013784/1-335 ESNSTAYLIY NDGVPKSVNY SRKYGHTK-- ---------- ---------- ENSP00000359699/1-361 KSNNTAYLIY NDGVPKPVNY SRKYGHTKGL LLWNRVQGFW LIHSIPQFPP ENSTTRP00000005500/1-360 EDNSTAYLIY NDGVPKSMNY SRKYGHTKGL LLWNRIQGFW LIHSIPHFPP bmy_22464T0/1-357 EDNNTAYLIY NDGVPKFMNY SRKYGHTKGL LLWNRVQGFW LIHSIPHFPP BACU004600/1-319 EDNNTAYLIY NDGVPKFMNY SRKYGHTKGL LLWNRIQGFW LIHSIPHFPP 151 200 ENSBTAP00000013784/1-335 VPEEGYDYPP TGRRNGQAGM CITFKYNQYE AIDSQLLVYN PNIYRCSIPA ENSP00000359699/1-361 IPEEGYDYPP TGRRNGQSGI CITFKYNQYE AIDSQLLVCN PNVYSCSIPA ENSTTRP00000005500/1-360 IPEEGYEYPP TGRRNGQTGI CITFKYNQYE AIDSQLLVCN PNIYSCSIPV bmy_22464T0/1-357 IPEEGYDYPP TGRRNGQTGI CITFKYNQYE AIDSQLLVCN PNIYSCSIPV BACU004600/1-319 IPEEGYDYPP TGRRNGQTGI CITFKYNQYE AIDSQLLVCN PNVYSCSIPV 201 250 ENSBTAP00000013784/1-335 AFRMELIHMP QLCAGSSSSE IPGRHLATLQ SAQGQKFLHF AKSDSFLDDI ENSP00000359699/1-361 TFHQELIHMP QLCTRASSSE IPGRLLTTLQ SAQGQKFLHF AKSDSFLDDI ENSTTRP00000005500/1-360 TFHQELVHMP QLCARSSSSE IPGRHLTTLQ SAQGQKFLHF AKSDYFLDDI bmy_22464T0/1-357 TFHQELVHMP QLCARSSSSE IPGRHLTTLQ SAQGQKFLHF AKSDSFLDDI BACU004600/1-319 TFHQELVHMP RLCARSSSSE IPVRHLTTLQ SAQGQKFLHF AKSDSFLDDI 251 300 ENSBTAP00000013784/1-335 FAAWMAQQLK THLLTETWQR KRQELPSNCS LPHHVYNIKA IKISRHSYFS ENSP00000359699/1-361 FAAWMAQRLK THLLTETWQR KRQELPSNCS LPYHVYNIKA IKLSRHSYFS ENSTTRP00000005500/1-360 FAAWMAQRLK THLLTETWQR KRQELPSNCS LPYHVYNVKA IKLSRQSYFS bmy_22464T0/1-357 FAAWMAQRLK THLLTETWQR KRQELPSNCS LPYHVYNVKA IKLSRQSYFS BACU004600/1-319 FAAWMAQRLK THLLTETWQR KRQELPSNCS LPYHVYNVKA IKLSRQSYFS 301 350 ENSBTAP00000013784/1-335 SYQDHAKWCI SRKGTKNRWT CIGDLNRSPY QASRSGGFIC TQNQHIYQAF ENSP00000359699/1-361 SYQDHAKWCI SQKGTKNRWT CIGDLNRSPH QAFRSGGFIC TQNWQIYQAF ENSTTRP00000005500/1-360 SYQDHAKWCI SQKGTKNRWT CIGDLNRSPH QAFRSGGFIC TQNQHIYQAF bmy_22464T0/1-357 SYQDHAKWCI SQKGTKNRWT CIGDLNRSPH QAFRSGGFIC TQNQRIYQAF BACU004600/1-319 SYQDHAKWCI SQKGTKNRWT CIGDLNRSPH QAFRSGGFIC TQNQRIYQAF 351 400 ENSBTAP00000013784/1-335 QGLVLYYENC N ENSP00000359699/1-361 QGLVLYYESC K ENSTTRP00000005500/1-360 QGLVLYYENC N bmy_22464T0/1-357 QGLVLYYENC N BACU004600/1-319 QGLVLYYENC N