KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:37 2014 Check: 00 .. Name: ENSP00000261402/1-661 Len: 1080 Check: 2537 Weight: 1.00 Name: ENSBTAP00000013805/1-662 Len: 1080 Check: 5114 Weight: 1.00 Name: ENSTTRP00000015458/1-665 Len: 1080 Check: 2286 Weight: 1.00 Name: bmy_13425T0/1-473 Len: 1080 Check: 5626 Weight: 1.00 Name: BACU000904/1-1080 Len: 1080 Check: 7444 Weight: 1.00 // 1 50 ENSP00000261402/1-661 -MEGAAAPVA GDRPDLGLGA PGSPREA--- ---------- ---------- ENSBTAP00000013805/1-662 -MEGAAAPAA G--PDLGPGA PGSPPEA--- ---------- ---------- ENSTTRP00000015458/1-665 -MEGAAAPAA GDCPDLGPGA PGSPPEA--- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 MVSEGGSAAA GPRFSLLASL PPRLRLSLGR ARGRAQRAPL GVFGGAQLPR 51 100 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 ASSPSXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 151 200 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 201 250 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 251 300 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 301 350 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 351 400 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- ---------- bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 401 450 ENSP00000261402/1-661 ---------- ---------- ---------- ---------- VAGATAA--- ENSBTAP00000013805/1-662 ---------- ---------- ---------- ---------- --GASAAPSA ENSTTRP00000015458/1-665 ---------- ---------- ---------- ---------- GAGATAAPAA bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX GAGATAAPAA 451 500 ENSP00000261402/1-661 --LEPRKPHG VKRHHHKHNL KHRYELQETL GKGTYGKVKR ATERFSGRVV ENSBTAP00000013805/1-662 ATPEPRKPHG VKRHHHKHNL KHRYELQETL GKGTYGKVKR ATERFSGRVV ENSTTRP00000015458/1-665 AAPEPRKPHG VKRHHHKHNL KHRYELQETL GKGTYGKVKR ATERFSGRVV bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 AAPEPRKPHG VKRHHHKHNL KHRYELQETL GKGTYGKVKR ATERFSGRVV 501 550 ENSP00000261402/1-661 AIKSIRKDKI KDEQDMVHIR REIEIMSSLN HPHIISIYEV FENKDKIVII ENSBTAP00000013805/1-662 AIKSIRKDKI KDEQDMVHIR REIEIMSSLN HPHIISIYEV FENKDKIVII ENSTTRP00000015458/1-665 AIKSIRKDKI KDEQDMVHIR REIEIMSSLN HPHIISIYEV FENKDKIVII bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 AIKSIRKDKI KDEQDMVHIR REIEIMSSLN HPHIISIYEV FENKDKIVII 551 600 ENSP00000261402/1-661 MEYASKGELY DYISERRRLS ERETRHFFRQ IVSAVHYCHK NGVVHRDLKL ENSBTAP00000013805/1-662 MEYASKGELY DYISERRRLS ERETRHFFRQ IVSAVHYCHK NGVVHRDLKL ENSTTRP00000015458/1-665 MEYASKGELY DYISERRRLS ERETRHFFRQ IVSAVHHCHK NGVVHRDLKL bmy_13425T0/1-473 ---------- ---------- ---------- ---------- ---------- BACU000904/1-1080 MEYASKGELY DYISERRRLS ERETRHFFRQ IVSAVHYCHK NGVVHRDLKL 601 650 ENSP00000261402/1-661 ENILLDDNCN IKIADFGLSN LYQKDKFLQT FCGSPLYASP EIVNGRPYRG ENSBTAP00000013805/1-662 ENILLDDNCN IKIADFGLSN LYQKDKFLQT FCGSPLYASP EIVNGRPYRG ENSTTRP00000015458/1-665 ENILLDDNCN IKIADFGLSN LYQKDKFLQT FCGSPLYASP EIVNGRPYRG bmy_13425T0/1-473 -------MSS EQIADFGLSN LYQKDKFLQT FCGSPLYASP EIVNGRPYRG BACU000904/1-1080 ENILLDDNCN IKIADFGLSN LYQKDKFLQT FCGSPLYASP EIVNGRPYRG 651 700 ENSP00000261402/1-661 PEVDSWALGV LLYTLVYGTM PFDGFDHKNL IRQISSGEYR EPTQPSDARG ENSBTAP00000013805/1-662 PEVDSWALGV LLYTLVYGTM PFDGFDHKNL IRQISSGEYR EPTQPSDARG ENSTTRP00000015458/1-665 PEVDSWALGV LLYTLVYGTM PFDGFDHKNL IRQISSGEYR EPTQPSDARG bmy_13425T0/1-473 PEVDSWALGV LLYTLVYGTM PFDGFDHKNL IRQISSGEYR EPTQPSDARG BACU000904/1-1080 PEVDSWALGV LLYTLVYGTM PFDGFDHKNL IRQISSGEYR EPTQPSDARG 701 750 ENSP00000261402/1-661 LIRWMLMVNP DRRATIEDIA NHWWVNWGYK SSVCDCDALH DSESPLLARI ENSBTAP00000013805/1-662 LIRWMLMVNP DRRATIEDIA NHWWVNWGYK SSVCDCDALH SSESPLLARI ENSTTRP00000015458/1-665 LIRWMLMVNP DRRATIEDIA NHWWVNWGYK SSVCDCDALH SAESPLLARI bmy_13425T0/1-473 LIRWMLMVNP DRRATIEDIA NHWWVNWGYK SSVCDCDALH SAESPLLARI BACU000904/1-1080 LIRWMLMVNP DRRATVEDIA NHWWVNWGYK SSVCDCDGLH SAESPLLARI 751 800 ENSP00000261402/1-661 IDWHHRSTGL QADTEAKMKG LAKPTTSEVM LERQRSLKKS KKENDFAQSG ENSBTAP00000013805/1-662 IDWHHRSTGL QAEAEAKVKG LAKPGAPEVV LERQRSLKKS KKENDFPQSG ENSTTRP00000015458/1-665 IDWHHRSTGL QAEAEAKIKG LAKPGAPEVM LERQRSLKKS KKENDFAQSG bmy_13425T0/1-473 IDWHHRSTGL QAEAEAKIKG LAKPGAPEVM LERQRSLKKS KKENDFAQSG BACU000904/1-1080 IDWHHRSTGL QAEAEAKMKG LAKPGAPEVM LERQRSLKKS KKENDFAQSG 801 850 ENSP00000261402/1-661 QDAVPESPSK LSSKRPKGIL KKRSNSEHRS HSTGFIEGVV GPALPSTFKM ENSBTAP00000013805/1-662 QDSVPESPSK LSSKRPKGIL KKRSNSEHRS HSTGFIEGVV SPALPPTFKL ENSTTRP00000015458/1-665 QDSVPESPSK VSSKRPKGIL KKRSNSEHRS HSTGFIEGVV SPALPPAFKL bmy_13425T0/1-473 QDSVPESPSK LSSKRPKGIL KKRSNSEHRS HSTGFIEGVV SPALPAAFKL BACU000904/1-1080 QDSVPESPSK LSSKRPKGIL KKRSNSEHRS HSTGFIEGVV SPALPPAFKL 851 900 ENSP00000261402/1-661 EQDLCRTGVL LPSSPEAEVP GKLSPKQSAT MPKKGILKKT QQRESGYYSS ENSBTAP00000013805/1-662 EQDLCRTAVP LPSPPEAEVP GKLSPKQSAT MPKKGILKKT QQRESGYYSS ENSTTRP00000015458/1-665 EQDLCRTAVP LPSAPEAEVP AKLSPKQSAT MPKKGILKKT QQRESGYYSS bmy_13425T0/1-473 EQDLCRTAVP LPSAPEAEVP AKLSPKQSAT MPKKGILKKT QQRESGYYSS BACU000904/1-1080 EQDLCRTAVP LPSAPEAEVP AKLSPKQSAT MPKKGILKKT QQRESGYYSS 901 950 ENSP00000261402/1-661 PERSESSELL DSNDVMGSSI PSPSPPDPAR VTSHSLSCRR KGILKHSSKY ENSBTAP00000013805/1-662 PERSESSELL DSNDGLGSSI PSPSPPDPAR VPSHSLSCRR KGILKHNSKY ENSTTRP00000015458/1-665 PERSESSELL DSNDGLGGGI PSPSPPDPAR VTSHSLSCHR KGILKHSSKY bmy_13425T0/1-473 PERSESSELL DGNDGLGGGI PSPSPPDPAR VTSHSLSCHR KGILKHSSKY BACU000904/1-1080 PERSESSELL DGNDGLGGGI PSPSPPDPAR VTSHSLSCHR KGILKHSSKY 951 1000 ENSP00000261402/1-661 SAGTMDPALV SPEMPTLESL SEPGVPAEGL SRSYSRPSSV ISDDSVLSSD ENSBTAP00000013805/1-662 SAGTMDPALA SPEMPTLESL LEPGVPSEGL SRSYSRPSSV ISDDSVLSSD ENSTTRP00000015458/1-665 S-GTMDPALA SPEMPTLESL LEPGIPAEGL SRSYSRPSSV ISDDSVLSSD bmy_13425T0/1-473 SEGTMDPALA SPEMPTLESL LEPGIPAEGL SRSYSRPSSV ISDDSVLSSD BACU000904/1-1080 SEGTMDPALA SPEMPTLESL LEPGIPAEGL SRSYSRPSSV ISDDSVLSSD 1001 1050 ENSP00000261402/1-661 SFDLLDLQEN RPARQRIRSC VSAENFLQIQ DFEGLQNRPR PQYLKRYRNR ENSBTAP00000013805/1-662 SFDLLDLQEN RPTRQRIRSC VSAENFLQIQ DFEGLQNRPR PQYLKRYRNR ENSTTRP00000015458/1-665 SFDLLDLQEN CPARQRIRSC VSAENFLQIQ DFEGLQNRPR PQYLKRYRNR bmy_13425T0/1-473 SFDLLDLQEN RPARQRIRSC VSAENFLQIQ DFEGLQNRPR PQYLKRYRNR BACU000904/1-1080 SFDLLDLQEN RPARQRIRSC VSAENFLQIQ DFEGLQNRPR PQYLKRYRNR 1051 1100 ENSP00000261402/1-661 LADSSFSLLT DMDDVTQVYK QALEICSKLN ENSBTAP00000013805/1-662 LADSSFSLLT DMDDVTQVYK KALEICNKLN ENSTTRP00000015458/1-665 LGDSSFSLLT DMDDVTQVYK KALEICNKLN bmy_13425T0/1-473 LGDSSFSLLT DMDDVTQVYK KALEICNKLN BACU000904/1-1080 LGDSSFSLLT DMDDVTQVYK KALEICNKLN