KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:38 2014 Check: 00 .. Name: ENSP00000355884/1-795 Len: 796 Check: 5760 Weight: 1.00 Name: ENSBTAP00000013808/1-786 Len: 796 Check: 8467 Weight: 1.00 Name: ENSTTRP00000014191/1-782 Len: 796 Check: 1817 Weight: 1.00 Name: bmy_10582T0/1-669 Len: 796 Check: 8444 Weight: 1.00 Name: BACU004030/1-628 Len: 796 Check: 4656 Weight: 1.00 // 1 50 ENSP00000355884/1-795 MSARTPLPTV NERDTENHTS VDGYTEPHIQ PTKSSSRQNI PRCRNSITSA ENSBTAP00000013808/1-786 ---------M PVLKLLMHTS VDGYTEPHIQ PTKSSSRQNI PRCRNSITSA ENSTTRP00000014191/1-782 ---------- ---DTENHTS VDGYTEPHIQ PTKSSSRQNI PRCRNSITSA bmy_10582T0/1-669 MSARTPLPTV NERDTEN--- ---------- ---------- ---------- BACU004030/1-628 ---------- ---------- ---------- ---MKEKEAR AKFRQIVSAV 51 100 ENSP00000355884/1-795 TDEQPHIGNY RLQKTIGKGN FAKVKLARHV LTGREVAVKI IDKTQLNPTS ENSBTAP00000013808/1-786 TDEQPHIGNY RLQKTIGKGN FAKVKLARHV LTGREVAVKI IDKTQLNPTS ENSTTRP00000014191/1-782 TDEQPHIGNY RLQKTIGKGN FAKVKLARHV LTSREVAVKI IDKTQLNPTS bmy_10582T0/1-669 ---------- ---------- ---------- -----VAVKI IDKTQLNPTS BACU004030/1-628 --------QY CHQKCIV--- ---------- ---------- ---------- 101 150 ENSP00000355884/1-795 LQKLFREVRI MKILNHPNIV KLFEVIETEK TLYLVMEYAS GGEVFDYLVA ENSBTAP00000013808/1-786 LQKLFREVRI MKILNHPNIV KLFEVIETEK TLYLVMEYAS GGEVFDYLVA ENSTTRP00000014191/1-782 LQKLFREVRI MKILNHPNIV KLFEVIETEK TLYLVMEYAS GGEVFDYLVA bmy_10582T0/1-669 LQKLFREVRI MKILNHPNIV KLFEVIETEK TLYLVMEYAS GGEVFDYLVA BACU004030/1-628 ---------- -----H---- ---------- ---------- ---------- 151 200 ENSP00000355884/1-795 HGRMKEKEAR AKFRQIVSAV QYCHQKYIVH RDLKAENLLL DGDMNIKIAD ENSBTAP00000013808/1-786 HGRMKEKEAR AKFRQIVSAV QYCHQKCIVH RDLKAENLLL DADMNIKIAD ENSTTRP00000014191/1-782 HGRMKEKEAR AKFRQIVSAV QYCHQKCIVH RDLKAENLLL DADMNIKIAD bmy_10582T0/1-669 HGRMKEKEAR AKFRQ----- ---------- ----AENLLL DADMNIKIAD BACU004030/1-628 ---------- ---------- ---------- RDLKAENLLL DADMNIKIAD 201 250 ENSP00000355884/1-795 FGFSNEFTVG NKLDTFCGSP PYAAPELFQG KKYDGPEVDV WSLGVILYTL ENSBTAP00000013808/1-786 FGFSNEFTVG NKLDTFCGSP PYAAPELFQG KKYDGPEVDV WSLGVILYTL ENSTTRP00000014191/1-782 FGFSNEFTVG SKLDTFCGSP PYAAPELFQG KKYDGPEVDV WSLGVILYTL bmy_10582T0/1-669 FGFSNEFTVG SKLDTFCGSP PYAAPELFQG KKYDGPEVDV WSLGVILYTL BACU004030/1-628 FGFSNEFTVG SKLDTFCGSP PYAAPELFQG KKYDGPEVDV WSLGVILYTL 251 300 ENSP00000355884/1-795 VSGSLPFDGQ NLKELRERVL RGKYRIPFYM STDCENLLKK LLVLNPIKRG ENSBTAP00000013808/1-786 VSGSLPFDGQ NLKELRERVL RGKYRIPFYM STDCENLLKK LLVLNPIKRG ENSTTRP00000014191/1-782 VSGSLPFDGQ NLKELRERVL RGKYRIPFYM STDCENLLKK LLVLNPIKRG bmy_10582T0/1-669 VSGSLPFDGQ NLK------- ---------- ---------- ---------- BACU004030/1-628 VSGSLPFDGQ NLKELRERVL RGKYRIPFYM STDCENLLKK LLVLNPIKRG 301 350 ENSP00000355884/1-795 SLEQIMKDRW MNVGHEEEEL KPYTEPDPDF NDTKRIDIMV TMGFARDEIN ENSBTAP00000013808/1-786 SLEQIMKDRW MNVGHEEEEL KPYAEPEPDF NDTKRIDIMI TMGFVRDEIN ENSTTRP00000014191/1-782 SLEQIMKDRW MNVGHEEEEL KPYAEPEPDF NDAKRIDIMV TMGFARDEIN bmy_10582T0/1-669 ---QIMKDRW MNVGHEEEEL KPYAEPEPDF NDIKRIDIMV TMGFARDEIN BACU004030/1-628 SLEQIMKDRW MNVGHEEEEL KPYAEPEPDF NDIKRIDIMV TMGFARDEIN 351 400 ENSP00000355884/1-795 DALINQKYDE VMATYILLGR KPPEFEGGES LSSGNLCQRS RPSSDLNNST ENSBTAP00000013808/1-786 DALINQKYDE VMATYILLGR KPPEFEGGES LSSGNLCQRS RPSSDLNNST ENSTTRP00000014191/1-782 DALINQKYDE VMATYILLGR KPPEFEGGES LSSGNLCQRS RPNSDLNNST bmy_10582T0/1-669 DALINQKYDE VMATYILLGR KPPEFEGGES LSSGNLCQRS RPNSDLNNST BACU004030/1-628 DALINQKYDE VMATYILLGR KPPEFEGGES LSSGNLCQRS RPNSDLNNST 401 450 ENSP00000355884/1-795 LQSPAHLKVQ RSISANQKQR RFSDHAGPSI PPAVSYTKRP QANSVESEQK ENSBTAP00000013808/1-786 LQSPAHLKVQ RSISANQKQR RFSDHAGPSI PPAVSYTKRP QANSVESEQK ENSTTRP00000014191/1-782 LQSPAHLKVQ RSISANQKQR RFSDHAGPSI PPAVSYTKRP QANSVESEQK bmy_10582T0/1-669 LQSPAHLKVQ RSISANQKQR RFSDHAGPSI PPAVSYTKRP QANSVESEQK BACU004030/1-628 LQSPAHLKVQ RSISANQKQR RFSDHAGPSI PPAVSYTKRP QANSVESEQK 451 500 ENSP00000355884/1-795 EEWDKDVARK LGSTTVGSKS EMTASPLVGP ERKKSSTIPS NNVYSGGSMA ENSBTAP00000013808/1-786 EDWDKDVARK LGSTTVGSKS EMTASPLVGP ERKKSSTIPS NNVYPGGSMA ENSTTRP00000014191/1-782 EEWDKDVARK LGSTTVGSKS EMTTSPLVGP ERKKSSTIPS NNVYPGGSMA bmy_10582T0/1-669 EEWDKDVARK LGSTTVGSKS EMTTSPLVGP ERKKSSTIPS NNVYPGGSMA BACU004030/1-628 EEWDKDVARK LGSTTVGSKS EMTTSPLVGP ERKKSSTIPS NNVYPGGSMA 501 550 ENSP00000355884/1-795 RRNTYVCERT TDRYVALQNG KDSSLTEMSV SSISSAGSSV ASAVPSARPR ENSBTAP00000013808/1-786 RRNTYVCERT TDRYTALQNG KDSSLTEMSA STMSSAGSAV ASAVPSARPR ENSTTRP00000014191/1-782 RRNTYVCERT TDRYTALQNG KDSSLTEMSA SSISSAGSAV ASAVPSARPR bmy_10582T0/1-669 RRNTYVCERT TDRYTALQNG KDSSLTEMSA SSISSAGSAV ASAVPSARPR BACU004030/1-628 RRNTYVCERT TDRYTALQNG KDSSLTEMSA SSISSAGSAV ASAVPSARPR 551 600 ENSP00000355884/1-795 HQKSMSTSGH PIKVTLPTIK DGSEAYRPG- TTQRVPAASP SAHSISTATP ENSBTAP00000013808/1-786 HQKSMSASGH PIKVTLPTIK DSSEAYRPG- TTQRVPAASP SAHSISASTP ENSTTRP00000014191/1-782 HQKSMSASGH PIKVTLPTIK DSSEAYRPG- TAQRAPAASP SAHSISTTTP bmy_10582T0/1-669 HQKSMSASGH PIKVTLPTIK DSSEAYRPGS TTQRVPAASP SAHSISTTTP BACU004030/1-628 HQKSMSASGH PIKVTLPTIK DSSEAYRPGS TTQRVPAASP SAHSISTTTP 601 650 ENSP00000355884/1-795 DRTRFPRGSS SRSTFHGEQL RERRSVAYNG PPASPSHETG AFAHARRGTS ENSBTAP00000013808/1-786 DRTRFPRGSS SRSTFHGEQL RERRSAAYNG PPASPSHEPG AFAHARRGTS ENSTTRP00000014191/1-782 DRTRFPRGSS SRSTFHGEQL RERRGAAYNG PPASPSHETG AFAHARRGTS bmy_10582T0/1-669 DRTRFPRGSS SRSTFHGEQL RERRGAAYNG PPASPSHETG AFAHARRGTS BACU004030/1-628 DRTRFPRGSS SRSTFHGEQL RERRGAAYNG PPASPSHETG AFAHARRGTS 651 700 ENSP00000355884/1-795 TGIISKITSK FVRRDPSEGE ASGRTDTSRS TSGEPKERDK EEGKDSKPRS ENSBTAP00000013808/1-786 TGIISKITSK FVRRDPSEGE ASGRADTSRS TTGEPKEREK EEGKDSKPRS ENSTTRP00000014191/1-782 TGIISKITSK FVRRDPSEGE ASGRADTSRS TTGEPKERDK EEGKDSKPRS bmy_10582T0/1-669 TGIISKITSK FVRRDPSEGE ASGRADTSRS TTGEPKERDK EEGKDSKPRS BACU004030/1-628 TGIISKITSK FVR------- --------RS TTGEPKERDK EEGKDSKPRS 701 750 ENSP00000355884/1-795 LRFTWSMKTT SSMDPNDMMR EIRKVLDANN CDYEQKERFL LFCVHGDARQ ENSBTAP00000013808/1-786 LRFTWSMKTT SSMDPNDMMR EIRKVLDANN CDYEQKERFL LFCVHGDARQ ENSTTRP00000014191/1-782 LRFTWSMKTT SSMDPSDMMR EIRKVLDANN CDYEQKERFL LFCVHGDARQ bmy_10582T0/1-669 LRFTWSMKTT SSMDPSDMMR EIRKVLDANN CDYEQKERFL LFCVHGDARQ BACU004030/1-628 LRFTWSMKTT SSMDPSDMMR EIRKVLDANN CDYEQKERFL LFCVHGDARQ 751 800 ENSP00000355884/1-795 DSLVQWEMEV CKLPRLSLNG VRFKRISGTS IAFKNIASKI ANELKL ENSBTAP00000013808/1-786 DSLVQWEMEV CKLPRLSLNG VRFKRISGTS IAFKNIASKI ANELKL ENSTTRP00000014191/1-782 DSLVQWEMEV CKLPRLSLNG VRFKRISGTS IAFKNIASKI ANELKL bmy_10582T0/1-669 DSLVQWEMEV CKLPRLSLNG VRFKRISGTS IAFKNIASKI ANELKL BACU004030/1-628 DSLVQWEMEV CKLPRLSLNG VRFKRISGTS IAFKNIASKI ANELKL