KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:38 2014 Check: 00 .. Name: ENSP00000385751/1-788 Len: 826 Check: 7157 Weight: 1.00 Name: BACU005345/1-825 Len: 826 Check: 9612 Weight: 1.00 Name: ENSBTAP00000013818/1-691 Len: 826 Check: 5671 Weight: 1.00 Name: bmy_10853T0/1-625 Len: 826 Check: 3671 Weight: 1.00 Name: ENSTTRP00000016518/1-755 Len: 826 Check: 6757 Weight: 1.00 // 1 50 ENSP00000385751/1-788 MSSARTPLPT LNERDTEQPT LGHLDSKPSS KSNMIRGRNS ATSADEQPHI BACU005345/1-825 MSSARTPLPT LNERDTEQPT LGHLDSKPSS KSNMLRGRNS ATSADEQPHI ENSBTAP00000013818/1-691 ---------- ---------- ---------- ---MLRGRNS ATSADEQPHI bmy_10853T0/1-625 MGNRKGSILK GVHVSTLQPT LGHLDSKPSS KSNMLRGRNS ATSADEQPHI ENSTTRP00000016518/1-755 ---------- ---------- ---------- ---MLRGRNS ATSADEQPHI 51 100 ENSP00000385751/1-788 GNYRLLKTIG KGNFAKVKLA RHILTGKEVA VKIIDKTQLN SSSLQKLFRE BACU005345/1-825 GNYRLLKTIG KGNFAKVKLA RHILTGKEVA VKIIDKTQLN SSSLQKLFRE ENSBTAP00000013818/1-691 GNYRLLKTIG KGNFAKVKLA RHILTGKEVA VKIIDKTQLN SSSLQKLFRE bmy_10853T0/1-625 GNYRLLKTIG KGNFAKVKLA RHILTGKEVA VKIIDKTQLN SSSLQKLFRE ENSTTRP00000016518/1-755 GNYRLLKTIG KGNFAKVKLA RHILTGKEVA VKIIDKTQLN SSSLQKLFRE 101 150 ENSP00000385751/1-788 VRIMKVLNHP NIVKLFEVIE TEKTLYLVME YASGGEVFDY LVAHGRMKEK BACU005345/1-825 VRIMKVLNHP NIVKLFEVIE TEKTLYLVME YASGGEVFDY LVAHGRMKEK ENSBTAP00000013818/1-691 VRIMKVLNHP NIVKLFEVIE TEKTLYLVME YASGGEVFDY LVAHGRMKEK bmy_10853T0/1-625 VRIMKVLNHP NIVKLFEVIE TEKTLYLVME YASGGEVFDY LVAHGRMKEK ENSTTRP00000016518/1-755 VRIMKVLNHP NIVKLFEVIE TEKTLYLVME YASGGEVFDY LVAHGRMKEK 151 200 ENSP00000385751/1-788 EARAKFRQIV SAVQYCHQKF IVHRDLKAEN LLLDADMNIK IADFGFSNEF BACU005345/1-825 EARAKFRQIV SAVQYCHQKF IVHRDLKAEN LLLDADMNIK IADFGFSNEF ENSBTAP00000013818/1-691 EARAKFRQIV SAVQYCHQKF IVHRDLKAEN LLLDADMNIK IADFGFSNEF bmy_10853T0/1-625 EARAKFRQIV SAVQYCHQKF IVHRD----- ---------- ---------- ENSTTRP00000016518/1-755 EARAKFRQIV SAVQYCHQKF IVHRDLKAEN LLLDADMNIK IADFGFSNEF 201 250 ENSP00000385751/1-788 TFGNKLDTFC GSPPYAAPEL FQGKKYDGPE VDVWSLGVIL YTLVSGSLPF BACU005345/1-825 TFGNKLDTFC GSPPYAAPEL FQGKKYDGPE VDVWSLGVIL YTLVSGSLPF ENSBTAP00000013818/1-691 TFGNKLDTFC GSPPYAAPEL FQGKKYDGPE VDVWSLGVIL YTLVSGSLPF bmy_10853T0/1-625 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016518/1-755 TFGNKLDTFC GSPPYAAPEL FQGKKYDGPE VDVWSLGVIL YTLVSGSLPF 251 300 ENSP00000385751/1-788 DGQNLKELRE RVLRGKYRIP FYMSTDCENL LKKFLILNPS KRGTLEQIMK BACU005345/1-825 DGQNLKELRE RVLRGKYRIP FYMSTDCENL LKKFLILNPS KRGTLEQIMK ENSBTAP00000013818/1-691 DGQNLKELRE RVLRGKYRIP FYMSTDCENL LKKFLILNPS KRGTLEQIMK bmy_10853T0/1-625 ----LKELRE RVLRGKYRIP FYMSTDCENL LKKFLILNPS KRGTLEQIMK ENSTTRP00000016518/1-755 DGQNLKELRE RVLRGKYRIP FYMSTDCENL LKKFLILNPS KRGTLEQIMK 301 350 ENSP00000385751/1-788 DRWMNVGHED DELKPYVEPL PDYKDPRRTE LMVSMGYTRE EIQDSLVGQR BACU005345/1-825 DRWMNVGHED DELKPYVEPL PDYKDPRRTE LMVSMGYTRE EIQDSLVGQR ENSBTAP00000013818/1-691 DRWMNVGHED DELKPYVEPL PDYKDPRRTE LMVSMGYTRE EIQDSLVSQR bmy_10853T0/1-625 DRWMNVGHED DELKPYVEPL PDYKDPRRTE LMVSMGYTRE EIQDSLVGQR ENSTTRP00000016518/1-755 DRWMNVGHED DELKPYVEPL PDYKDPRRTE LMVSMGYTRE EIQDSLVGQR 351 400 ENSP00000385751/1-788 YNEVMATYLL LGYKSSELEG DTITLKPRPS ADLTNSSAPS PSHKVQRSVS BACU005345/1-825 YNEVMATYLL LGYKSSELEG DTITLKPRPS ADLTNSSAPS PSHKVQRSVS ENSBTAP00000013818/1-691 YNEVMATYLL LGYKSSELEG DTITLKPRPS ADLANSSAPS PSHKVQRSVS bmy_10853T0/1-625 YNEVMATYLL LGYKSSELEG DTITLKPRPS ADLTNSSAPS PSHKVQRSVS ENSTTRP00000016518/1-755 YNEVMATYLL LGYKSSELEG DTITLKPRPS ADLTNSSAPS PSHKVQRSVS 401 450 ENSP00000385751/1-788 ANPKQRRFSD QAAGPAIPTS NSYSKKTQSN NAENKRPEED RESGRKASST BACU005345/1-825 ANPKQRRFSD Q-AGPAIPTS NSYSKKTQSN NAENKRPEED REPGRKASST ENSBTAP00000013818/1-691 ANPKQRRFSD Q-AGPAIPTS NSYSKKTQSS NAENKRPEED RESGRKASST bmy_10853T0/1-625 ANPKQRRFSD Q--------- ---------- --ENKRPEED REPGRKASST ENSTTRP00000016518/1-755 ANPKQRRFSD QAAGPAIPTS NSYSKKTQSN NAENKRPEED REPGRKASST 451 500 ENSP00000385751/1-788 AKVPASPLPG LERKKTTPTP STNSVLSTST NRSRNSPLLE RASLGQASIQ BACU005345/1-825 AKVPASPLPG LERKKTTPTP STNSVLSTST NRSRNSPLLE RTSLGQASIQ ENSBTAP00000013818/1-691 AKVPASPLPG LERKKTTPTP STNSVLSTST NRSRNSPLLE RASLGQASIQ bmy_10853T0/1-625 AKVPASPLPG LERKKTTPTP STNSVLSTST NRSRNSPLLE RASLGQASIQ ENSTTRP00000016518/1-755 AKVPASPLPG LERKKTTPTP STNSVLSTST NRSRNSPLLE RASLGQASIQ 501 550 ENSP00000385751/1-788 NGKDSLTMPG SRASTASAS- ---------- ---------- ---------- BACU005345/1-825 NGKDSLTMPG SRASTASASA AVSAARPRQH QKSMSASVHP NKATGLPPTD ENSBTAP00000013818/1-691 NGKD------ ---------- ---------- ---------- ---------- bmy_10853T0/1-625 NGKD------ ---------- ---------- ---------- ---------- ENSTTRP00000016518/1-755 NGKDSLTMPG SRASTASAS- ---------- ---------- ---------- 551 600 ENSP00000385751/1-788 -------AAV SAARPRQHQK SMSASVHPNK ASGLPPTESN CEVPRPSTAP BACU005345/1-825 SNSVPAPAAV SAARPRQHQK SMSASVHPNK ATGLPPTDSN CEVPRPSTAP ENSBTAP00000013818/1-691 ---------- ---------- ---------- ---------- ------STAP bmy_10853T0/1-625 ---------- ---------- ---------- ---------- ------STAP ENSTTRP00000016518/1-755 -------AAV SAARPRQHQK SMSASVHPNK ATGLPPTDSN CEVPRPSTAP 601 650 ENSP00000385751/1-788 QRVPVASPSA HNISSSGGAP DRTNFPRGVS SRSTFHAGQL RQVRDQQNLP BACU005345/1-825 QRVPVASPSA HNISSSGGAP DRTNFPRGVS SRSTFHAGQL RQVRDQQNLP ENSBTAP00000013818/1-691 QRVPVASPSA HNISSSGGAP DRTNFPRGVS SRSTFHAGQL RQVRDQQNLP bmy_10853T0/1-625 QRVPVASPSA HNISSSGGAP DRTNFPRGVS SRSTFHAGQL RQVRDQQNLP ENSTTRP00000016518/1-755 QRVPVASPSA HNISSSGGAP DRTNFPRGVS SRSTFHAGQL RQVRDQQNLP 651 700 ENSP00000385751/1-788 YGVTPASPSG HSQGRRGASG SIFSKFTSKF VRRNLSFRFA RRNLNEPESK BACU005345/1-825 YGVTPASPSG NSQGRRGASG SIFSKFTSKF VRRNLSFRFA RRNLNEPESK ENSBTAP00000013818/1-691 YGVTPASPSG NSQGRRGASG SIFSKFTSKF VR-------- -RNLNEPESK bmy_10853T0/1-625 YGVTPASPSG NSQGRRGASG SIFSKFTSKF VR-------- -RNLNEPESK ENSTTRP00000016518/1-755 YGVTPASPSG NSQGRRGASG SIFSKFTSKF VRXXXXXXXX XXNLNEPESK 701 750 ENSP00000385751/1-788 DRVETLRPHV VGSGGNDKEK EEFREAKPRS LRFTWSMKTT SSMEPNEMMR BACU005345/1-825 DRVETLRPHV VGSGGSDKEK EEFREAKPRS LRFTWSMKTT SSMEPNEMMR ENSBTAP00000013818/1-691 DRLETHRPHV VGSGGNDKEK EDFREAKPRS LRFTWSMKTT SSMEPNEMMR bmy_10853T0/1-625 DRVETLRPHV VGSGGSDKEK EEFREAKPRS LRFTWSMKTT SSMEPNEMMR ENSTTRP00000016518/1-755 DRVETLRPHV VGSGGSDKEK EEFREAKPRS LRFTWSMKTT SSMEPNEMMR 751 800 ENSP00000385751/1-788 EIRKVLDANS CQSELHEKYM LLCMHGTPGH EDFVQWEMEV CKLPRLSLNG BACU005345/1-825 EIRKVLDANS CQSELHEKYM LLCMHGTPGH ENFVQWEMEV CKLPRLSLNG ENSBTAP00000013818/1-691 EIRKVLDANS CQSELHEKYM LLCMHGTPGH ESFVQWEMEV CKLPRLSLNG bmy_10853T0/1-625 EIRKVLDANS CQSELHEKYM LLCMHGTPGH ENFVQWEMEV CKLPRLSLNG ENSTTRP00000016518/1-755 EIRKVLDANS CQSELHEKYM LLCMHGTPGH ENFVQWEMEV CKLPRLSLNG 801 850 ENSP00000385751/1-788 VRFKRISGTS MAFKNIASKI ANELKL BACU005345/1-825 VRFKRISGTS MAFKNIASKI ANELKL ENSBTAP00000013818/1-691 VRFKRISGTS MAFKNIASKI ANELKL bmy_10853T0/1-625 VRFKRISGTS MAFKNIASKI ANELKL ENSTTRP00000016518/1-755 VRFKRISGTS MAFKNIASKI ANELKL