KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:39 2014 Check: 00 .. Name: ENSP00000279146/1-330 Len: 394 Check: 3298 Weight: 1.00 Name: ENSTTRP00000012585/1-303 Len: 394 Check: 3144 Weight: 1.00 Name: ENSBTAP00000013841/1-330 Len: 394 Check: 2230 Weight: 1.00 Name: bmy_07839T0/1-394 Len: 394 Check: 9836 Weight: 1.00 Name: BACU019896/1-303 Len: 394 Check: 8284 Weight: 1.00 // 1 50 ENSP00000279146/1-330 MADIIARLRE DGIQKRVIQE GRGELPDFQD GTKATFHYRT LHSDDEGTVL ENSTTRP00000012585/1-303 MADIIARLRE DGIQKRVIEE GRGELPDFQD GTKATFHYRT LRSDDEGTVL ENSBTAP00000013841/1-330 MADIIARLRE DGIQKRVIQE GRGALPDFQD GTKATFHYRT LRSDEEGAVL bmy_07839T0/1-394 MADIIARLRE DGIQKRVIKE GRGELPDFQD GTKATFHYRT LRSDEEGTVL BACU019896/1-303 LSDRIC---- ---------- ---------- GPQATFHYRT LRSDEEGTVL 51 100 ENSP00000279146/1-330 DDSRARGKPM ELIIGKKFKL PVWETIVCTM REGEIAQFLC DIK------- ENSTTRP00000012585/1-303 DDPGVR-KPM ELIMQEK--- ---------- ---------- ---------- ENSBTAP00000013841/1-330 DDSRVRGKPM ELIIGKKFKL PVWETIVRTM REGEIAQFCC DVK------- bmy_07839T0/1-394 DDSRLRGKPM ELIIGKKFKL PVWETIVCTM REGEIAQFCC DVKCPFSGGD BACU019896/1-303 DDSRVRGKPM ELIIGKKFKL PVWETIVCTM REGEIAQFCC DVK------- 101 150 ENSP00000279146/1-330 ---------- ---------- ---HVVLYPL VAKSLRNIAV GKDPLEGQRH ENSTTRP00000012585/1-303 ---------- ---------- ---HVVLYPL VAKSLRNIAA GKDPLEGQRH ENSBTAP00000013841/1-330 ---------- ---------- ---HVVLYPL VAKSLRNIAA GKDPLEGQRH bmy_07839T0/1-394 GARGWASWAG DQPAHWCPLT LRQHVVLYPL VAKSLRNIAA GKDPLEGQRH BACU019896/1-303 ---------- ---------- ---HVVLYPL VAKSLRNIAA GKDPLEGQRH 151 200 ENSP00000279146/1-330 CCGVAQMREH SSLGHADLDA LQQNPQPLIF HMEMLKVESP GTYQQDPWAM ENSTTRP00000012585/1-303 CCGIAQMHEH NSLGHADLDA LQQNPQPLIF DIEMLKVENP GTYQQDPWAM ENSBTAP00000013841/1-330 CCGIAQMHEH NSLGHADLDA LQQNPQPLIF DIEMLKVENP GTYQQDPWAM bmy_07839T0/1-394 CCGIAQMHEH SSLGHADLDA LQQNPQPLIF DIEMLKVENP GTYQQDPWAM BACU019896/1-303 CCGIAQMHEH NSLGHADLDA LQQNPQPLVF DIEMLKVENP GTYQQDPWAM 201 250 ENSP00000279146/1-330 TDEEKAKAVP LIHQEGNRLY REGHVKEAAA KYYDAIACLK NLQMK----- ENSTTRP00000012585/1-303 TDEEKAKAVP VIHQEGNRLY REGRVKEAAA KYYDAIACLK NLQMK----- ENSBTAP00000013841/1-330 TDEEKAKAVP VIHQEGNRLY REGHVKEAAA KYYDAIACLK NLQMK----- bmy_07839T0/1-394 TDEEKAKAVP VIHQEGNRLY REGRVKEAAA KYYDAIACLK NLQMKVPPEG BACU019896/1-303 TDEEKAKAVP VIHQEGNRLY REGRVKEAAA KYYDAIACLK NLQMK----- 251 300 ENSP00000279146/1-330 ---------- ---------- ---------E QPGSPEWIQL DQQITPLLLN ENSTTRP00000012585/1-303 ---------- ---------- ---------E QPGSPDWIQL DLQITPLLLN ENSBTAP00000013841/1-330 ---------- ---------- ---------E QPGSPDWIQL DQQITPLLLN bmy_07839T0/1-394 CSGWVEGVRW GQGAQVSASF ALSLPPRPQE QPGSPDWIQL DQQITPLLLN BACU019896/1-303 ---------- ---------- ---------E QPGSPDWIQL DQQITPLLLN 301 350 ENSP00000279146/1-330 YCQCKLVVEE YYEVLDHCSS ILNKYDDNVK AYFKRGKAHA AVWNAQEAQA ENSTTRP00000012585/1-303 YCQCKLAAQE YYEVLDHCSS ILNKYDDNVK AYFKRGKAHA AVWNAQEAQA ENSBTAP00000013841/1-330 YCQCKLVAEE YYEVLDHCSS ILNKYDDNVK AYFKRGKAHA AVWNAQEAQA bmy_07839T0/1-394 YCQCKLAAQE YYEVLDHCSS ILNKYDDNVK AYFKRGKAHA AVWNAQEAQA BACU019896/1-303 YCQCKLAAQE YYEVLDHCSS ILNKYDDNVK AYFKRGKAHA AVWNAQEAQA 351 400 ENSP00000279146/1-330 DFAKVLELDP ALAPVVSREL QALEARIRQK DEEDKARFRG IFSH ENSTTRP00000012585/1-303 DFAKVLELDP ALAPIVSREL RALEARIRQK DEEDRARFRG IFSH ENSBTAP00000013841/1-330 DFAKVLQLDP ALAPVVSREL RALEARIRQK DEEDKARFRG IFSH bmy_07839T0/1-394 DFAKVLELDP ALAPVVSREL RALEARIRQK DEEDKARFRG IFSH BACU019896/1-303 DFAKVLELDP ALAPVVSREL RALEARIRQK DEEDKARFRG I---