KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:40 2014 Check: 00 .. Name: ENSTTRP00000012587/1-1241 Len: 1276 Check: 4446 Weight: 1.00 Name: ENSBTAP00000013851/1-1246 Len: 1276 Check: 3169 Weight: 1.00 Name: ENSP00000348772/1-1244 Len: 1276 Check: 5665 Weight: 1.00 Name: bmy_07840T0/1-1274 Len: 1276 Check: 2349 Weight: 1.00 Name: BACU003541/1-1272 Len: 1276 Check: 6963 Weight: 1.00 // 1 50 ENSTTRP00000012587/1-1241 MLIKEYHILL PMSLDEYQVA QLYMIQKKSR EESSGEGSGV EILANRPYTD ENSBTAP00000013851/1-1246 MLIKEYHILL PMSLDEYQVA QLYMIQKKSR EESSGEGSGV EILANRPYTD ENSP00000348772/1-1244 MLIKEYHILL PMSLDEYQVA QLYMIQKKSR EESSGEGSGV EILANRPYTD bmy_07840T0/1-1274 MLIKEYHILL PMSLDEYQVA QLYMIQKKSR EESSGEGSGV EILANRPYAD BACU003541/1-1272 MLIKEYHIVL PMSLDEYQVA QLYMIQKKSR EESSGEGSGV EILANRPYTD 51 100 ENSTTRP00000012587/1-1241 GPGGSGQYTH KVYHVGSHIP GWFRALLPKA ALQVEEESWN AYPYTRTRYT ENSBTAP00000013851/1-1246 GPGGSGQYTH KVYHVGSHIP GWFRALLPKA ALQVEEESWN AYPYTRTRYT ENSP00000348772/1-1244 GPGGSGQYTH KVYHVGSHIP GWFRALLPKA ALQVEEESWN AYPYTRTRYT bmy_07840T0/1-1274 GPGGSGQYTH KVYHVGSHIP GWFRALLPKA ALQVEEESWN AYPYTRTRYT BACU003541/1-1272 GPGGSGQYTH KVYHVGSHIP GWFRALLPKA ALQVEEESWN AYPYTRTRYT 101 150 ENSTTRP00000012587/1-1241 CPFVEKFSIE IETYYLPDGG QQPNVFNLSG AERRQRILDT IDIVRDAVAP ENSBTAP00000013851/1-1246 CPFVEKFSIE IETYYLPDGG QQPNVFNLSG AERRQRILDT IDIVRDAVAP ENSP00000348772/1-1244 CPFVEKFSIE IETYYLPDGG QQPNVFNLSG AERRQRILDT IDIVRDAVAP bmy_07840T0/1-1274 CPFVEKFSIE IETYYLPDGG QQPNVFNLSG AERRQRILDT IDIVRDAVAP BACU003541/1-1272 CPFVEKFSIE IETYYLPDGG QQPNVFNLSG AERRQRILDT IDIVRDAVAP 151 200 ENSTTRP00000012587/1-1241 GEYKAEEDPR LYRSAKTGRG PLADDWARTA AQTGPLMCAY KLCKVEFRYW ENSBTAP00000013851/1-1246 GEYKAEEDPR LYRSAKTGRG PLADDWARTA AQTGPLMCAY KLCKVEFRYW ENSP00000348772/1-1244 GEYKAEEDPR LYHSVKTGRG PLSDDWARTA AQTGPLMCAY KLCKVEFRYW bmy_07840T0/1-1274 GEYKAEEDPR LYRSAKTGRG PLADDWARTA AQTGPLMCAY KLCKVEFRYW BACU003541/1-1272 GEYKAEEDPR LYRSAKTGRG PLADDWARTA AQTGPLMCAY KLCKVEFRYW 201 250 ENSTTRP00000012587/1-1241 GMQAKIEQFI HDVGLRRVML RAHRQAWCWQ DEWTELSMAD IRALEEETAR ENSBTAP00000013851/1-1246 GMQAKIEQFI HDVGLRRVML RAHRQAWCWQ DEWTELSMAD IRALEEETAR ENSP00000348772/1-1244 GMQAKIEQFI HDVGLRRVML RAHRQAWCWQ DEWTELSMAD IRALEEETAR bmy_07840T0/1-1274 GMQAKIEQFI HDVGLRRVML RAHRQAWCWQ DEWTELSMAD IRALEEETAR BACU003541/1-1272 GMQAKIEQFI HDVGLRRVML RAHRQAWCWQ DEWTELSMAD IRALEEETAR 251 300 ENSTTRP00000012587/1-1241 MLAQRMAKCN TGSEGPEAQP PGKPSTEARA GTSRAGTPDG PEVPPGPDAS ENSBTAP00000013851/1-1246 MLAQRMAKCN TGSEGPEAQP PGKPSSEARA GASHAGTPDG PEAPPGPDAS ENSP00000348772/1-1244 MLAQRMAKCN TGSEGSEAQP PGKPSTEARS AASNTGTPDG PEAPPGPDAS bmy_07840T0/1-1274 MLAQRMAKCN TGSEGPEAQP PGKPSTEARA GASRAGTPDG PEVPPGPDAS BACU003541/1-1272 MLAQRMAKCS SGSEGPEAQP PSKPSTEARA GASRAGTPDG PEAPPGPDAS 301 350 ENSTTRP00000012587/1-1241 PDASFGKQWS SSSRSSYSSQ HGGGVSPQTL SEWRMQNIAR DSENSSEEEF ENSBTAP00000013851/1-1246 PDASFSKQWS SSSRSSYSSQ HGGGVSPQTL SEWRMQNIAR DSENSSEEEF ENSP00000348772/1-1244 PDASFGKQWS SSSRSSYSSQ HGGAVSPQSL SEWRMQNIAR DSENSSEEEF bmy_07840T0/1-1274 PDASFGKQWS SSSRSSYSSQ HGGGVSPQTL SEWRMQNIAR DSENSSEEEF BACU003541/1-1272 PDASFGKQWS SSSRSSYSSQ HGGGVSPQTL SEWRMQNIAR DSENSSEEEF 351 400 ENSTTRP00000012587/1-1241 FDAH------ ---------- ---------- --EGFSDSDE VFPKEMTKWN ENSBTAP00000013851/1-1246 FDAH------ ---------- ---------- --EGFSDSDE VFPKEMTKWN ENSP00000348772/1-1244 FDAH------ ---------- ---------- --EGFSDSEE VFPKEMTKWN bmy_07840T0/1-1274 FDAHGQHPRP VGGGGGSLSS ARQPMTQPLV PSEGFSDSDE VFPKEMTKWN BACU003541/1-1272 FDAHGQHPRP VGGGGGSLSS SRQPMTQPLV PSEGFSDSDE VFPKEMTKWN 401 450 ENSTTRP00000012587/1-1241 SNDFIDAFAC PMEAEGAPDP GTESTKDIGD GARAPRDPEG PDG--AGELR ENSBTAP00000013851/1-1246 SNDFIDAFAS PMEAEGTPDP GTEGTKDLGD GARAPRDSEG PDGDSAGELG ENSP00000348772/1-1244 SNDFIDAFAS PVEAEGTPEP GAEAAKGIED GAQAPRDSEG LDG--AGELG bmy_07840T0/1-1274 SNDFIDAFAC PMEAEGAPDP GTESTKDIGD GARAPRDPEG LDG--AGELG BACU003541/1-1272 SNDFIDAFAC PMEAEGAPDP GTESTKDIGD GARAPRDPEG LDG--AGELG 451 500 ENSTTRP00000012587/1-1241 AETCAVHALF LILHSGNILD SGPGDTSSKQ ADVQTLSLAF EAITRVHFPE ENSBTAP00000013851/1-1246 AETCEVHALF LVLHSGSILD SGPGDADSKR ADVQTLSLAF EAVTRVHFPE ENSP00000348772/1-1244 AEACAVHALF LILHSGNILD SGPGDANSKQ ADVQTLSSAF EAVTRIHFPE bmy_07840T0/1-1274 AETCAVHALF LILHSGNILD SGPGDTNSKQ ADVQTLSLAF EAITRVHFPE BACU003541/1-1272 AETCAVHALF LILHSGNILD SGPGDTNSKQ ADVQTLSLAF EAITRVHFPE 501 550 ENSTTRP00000012587/1-1241 ALGHVALRLV PCPPICAAAY ALVSN--LSP YSHDGDSLSR SQDHIPLAAL ENSBTAP00000013851/1-1246 ALGHVALRLV PCPPICAAAY ALVSN--LSP YSHDGDSLSR SQDHIPLAAL ENSP00000348772/1-1244 ALGHVALRLV PCPPICAAAY ALVSN--LSP YSHDGDSLSR SQDHIPLAAL bmy_07840T0/1-1274 ALGHVALRLV PCPPICAAAY ALVSKYCLSP YSHDGDGLSR SQDHIPLAAL BACU003541/1-1272 ALGHVALRLV PCPPICASAY ALVSN--LSP YSHDGDSLSR SQDHIPLAAL 551 600 ENSTTRP00000012587/1-1241 PLLATSSSRY QGAVATVIAR TNQAYAAFLR SSEGVGFCGQ VVLIGDGVGG ENSBTAP00000013851/1-1246 PLLATSSSRY QGAVATVIAR TNQAYAAFLR SSEGAGFCGQ VVLIGDGVGG ENSP00000348772/1-1244 PLLATSSSRY QGAVATVIAR TNQAYSAFLR SPEGAGFCGQ VALIGDGVGG bmy_07840T0/1-1274 PLLATSSSRY QGAVATVIAR TNQAYAAFLR SSEGVGFCGQ VVLIGDGVGG BACU003541/1-1272 PLLATSSSRY QGAVATVIAR TNQAYAAFLR SSEGVGFCGQ VVLIGDGVGG 601 650 ENSTTRP00000012587/1-1241 ILGFDALCHS ASAGTGSRSS SRRGSTNNEL LSPEVGPVRD PLADGVEGLG ENSBTAP00000013851/1-1246 ILGFDALCHS ASVGTGSRSS SRRGSMNNEL LSPEAGPMRD PLAEGAEGLG ENSP00000348772/1-1244 ILGFDALCHS ANAGTGSRGS SRRGSMNNEL LSPEFGPVRD PLADGVEGLG bmy_07840T0/1-1274 ILGFDALCHS ASAGSGSRSS SRRGSVNNEL LSPEVGPVRD PLADGVEGLG BACU003541/1-1272 ILGFDALCHS ASAGSGSRSS SRRGSVNNEL LSPEVGPVRD PLADGVEGLG 651 700 ENSTTRP00000012587/1-1241 RASPEPSVLP AQHTHSDMAS PEPEGSQNSL QTVPSATSSG EPRRASTASC ENSBTAP00000013851/1-1246 RASPEPSALP TQRTPSDMAG PEPEGSQNSL QAAPPATSSG EPRRASTASC ENSP00000348772/1-1244 RGSPEPSALP PQRIPSDMAS PEPEGSQNSL QAAPATTSSW EPRRASTAFC bmy_07840T0/1-1274 RASPEPSVLP AQHTHSDMAS PEPEGSQNSL QTAPPATSSG EPRRASTACC BACU003541/1-1272 RASPEPSVLP AQHTYSDMAS PEPEGSQNSL QTVPPATSSG EPRRASTACC 701 750 ENSTTRP00000012587/1-1241 PPAAASEVPD GLTSATRLDF KVSGFFLFGS PLGLVLALRK TVMPTLEVAQ ENSBTAP00000013851/1-1246 PPTATSEAPD SAPCAARLDF KVSGFFLFGS PLGLVLALRK TVMPTLEVAQ ENSP00000348772/1-1244 PPAASSEAPD GPSSTARLDF KVSGFFLFGS PLGLVLALRK TVMPALEAAQ bmy_07840T0/1-1274 PPTAASESPD GLTTATRLDF KVSGFFLFGS PLGLVLALRK TVMPTLEVAQ BACU003541/1-1272 PPAAASEAPD GLTTATRLDF KVSGFFLFGS PLGLVLALRK TVMPTLEVAQ 751 800 ENSTTRP00000012587/1-1241 MRPACEQIYN LFHAADPCAS RLEPLLAPKF QAIAPLAVPR YQKFPLGDGS ENSBTAP00000013851/1-1246 MRPACEQIYN LFHAADPCAS RLEPLLAPKF QAIAPLAVPR YQKFPLGDGS ENSP00000348772/1-1244 MRPACEQIYN LFHAADPCAS RLEPLLAPKF QAIAPLTVPR YQKFPLGDGS bmy_07840T0/1-1274 MRPACEQIYN LFHAADPCAS RLEPLLAPKF QAIAPLAVPR YQKFPLGDSS BACU003541/1-1272 MRPACEQIYN LFHAADPCAS RLEPLLAPKF QAIAPLAVPR YQKFPLGDGS 801 850 ENSTTRP00000012587/1-1241 SLLLADTLQT HSGLFLEELE MLVPSTPTST SGAFWKGSEL GSDLPAQPAA ENSBTAP00000013851/1-1246 SLLLADTLQT HSGLFLEELE MLVPSTPTSA SGAFWKGNEL GGDPPAQPTA ENSP00000348772/1-1244 SLLLADTLQT HSSLFLEELE MLVPSTPTST SGAFWKGSEL ATDPPAQPAA bmy_07840T0/1-1274 SLLLADTLQT HSGLFLEELE MLVPSTPTSA SGAFWKGSEL GNDLPAQPAA BACU003541/1-1272 SLLLADTLQT HSGLFLEELE MLVPSTPTSA SGAFWKGSEL GNDLPAQSAA 851 900 ENSTTRP00000012587/1-1241 PSTTSEVVKI LERWWGTKRI DYSLYCPEAL TAFPTVTLPH LFHASYWESA ENSBTAP00000013851/1-1246 PSTTSEVVKI LERWWGTKRI DYSLYCPEAL TAFPTVTLPH LFHASYWESA ENSP00000348772/1-1244 PSTTSEVVKI LERWWGTKRI DYSLYCPEAL TAFPTVTLPH LFHASYWESA bmy_07840T0/1-1274 PSTTSEVVKI LERWWGTKRI DYSLYCPEAL TAFPTVSLPH LFHASYWESA BACU003541/1-1272 PSTTSEVVKI LERWWGTKRI DYSLYCPEAL TAFPTVSLPH LFHASYWESA 901 950 ENSTTRP00000012587/1-1241 DVVAFILRQV MEKEQPQLAE CEEPSIYSPA FPREKWQRKR TQVKIRXXXX ENSBTAP00000013851/1-1246 DVVAFILRQV GPGAARTHVW ARVPLTSSSR LPVISWPWAH TVSSRQNVTS ENSP00000348772/1-1244 DVVAFILRQV IEKERPQLAE CEEPSIYSPA FPREKWQRKR TQVKIRNVTS bmy_07840T0/1-1274 DVVAFILRQV IEKERPQLTE CEEPSIYSPA FPREKWQRKR TQVKIRNVTS BACU003541/1-1272 DVVAFILRQV IKKERPQLTE CEEPSIYSPA FPREKWQRKR TQVKIRNVTS 951 1000 ENSTTRP00000012587/1-1241 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013851/1-1246 NHRASDTVVC EGRPQVLNGR FMYGPLDVVT LTGEKVDIYI MTQPLSGKWI ENSP00000348772/1-1244 NHRASDTVVC EGRPQVLSGR FMYGPLDVVT LTGEKVDVYI MTQPLSGKWI bmy_07840T0/1-1274 NHRASDTVVC EGRPQVLNGR FMYGPLDVVT LTGEKVDIYI MTQPLSGKWI BACU003541/1-1272 NHRASDTVVC EGRPQVLNGR FMYGPLDVVT LTGEKVDIYI MTQPLSGKWI 1001 1050 ENSTTRP00000012587/1-1241 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013851/1-1246 HFGTEVTNSS GRLTFPVPLE RALGVGVYPV RMVVRGDHTY AECCLTVVAR ENSP00000348772/1-1244 HFGTEVTNSS GRLTFPVPPE RALGIGVYPV RMVVRGDHTY AECCLTVVAR bmy_07840T0/1-1274 HFGTEVTNSS GRLTFPVPME RALGIGVYPV RMVVRGDHTY AECCLTVVAR BACU003541/1-1272 HFGTEVTNSS GRLTFPVPGE RALGIGVYPV RMVVRGDHTY AECCLTVVAR 1051 1100 ENSTTRP00000012587/1-1241 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013851/1-1246 GTEAVVFSID GSFTASVSIM GSDPKVRAGA VDVVRHWQDA GYLIVYVTGR ENSP00000348772/1-1244 GTEAVVFSID GSFTASVSIM GSDPKVRAGA VDVVRHWQDS GYLIVYVTGR bmy_07840T0/1-1274 NTEAVVFSID GSFTASVSIM GSDPKVRAGA VDVVRHWQDA GYLIVYVTGR BACU003541/1-1272 NTEAVVFSID GSFTASVSIM GSDPKVRAGA VDVVRHWQDA GYLIVYVTGR 1101 1150 ENSTTRP00000012587/1-1241 XXMQKHRVVA WLSQHNFPHG VV--CDGLTH DPLRQKAV-L QSLVQEVELN ENSBTAP00000013851/1-1246 PDMQKHRVVA WLSQHNFPHG VVSFCDGLTH DPLRQKAMFL QSLVQEVELN ENSP00000348772/1-1244 PDMQKHRVVA WLSQHNFPHG VVSFCDGLTH DPLRQKAMFL QSLVQEVELN bmy_07840T0/1-1274 PDMQKHRVVA WLSQHNFPHG VVSFCDGLTH DPLRQKAVFL QSLVQEVELN BACU003541/1-1272 PDMQKHRVVA WLSQHNFPHG VVSFCDGLTH DPLRQKAVFL QSLVQEVELN 1151 1200 ENSTTRP00000012587/1-1241 IVAGYGSPKD VAVYAALGLP PGQTYIVGRA VRKLQAQCQF LSDGYVAHLG ENSBTAP00000013851/1-1246 FVAAYGSPKD VAVYAALGLP PSQTYIVGRA VRKLQAQCQF LSDGYVAHLG ENSP00000348772/1-1244 IVAGYGSPKD VAVYAALGLS PSQTYIVGRA VRKLQAQCQF LSDGYVAHLG bmy_07840T0/1-1274 IVAGYGSPKD VAVYAALGLP PGQTYIVGRA VRKLQAQCQF LSDGYVAHLG BACU003541/1-1272 IVAGYGSPKD VAVYAALGLP PGQTYIVGRA VRKLQAQCQF LSDGYVAHLG 1201 1250 ENSTTRP00000012587/1-1241 QLEASSHPHA PVGPSRAALA KSSYGGAAPV DFLRKQSQLL RSRGPSQAER ENSBTAP00000013851/1-1246 QLEAGSHPHA TSGPSRAALA KSSYGGAAPV DFLRKQSQLL RSRGPSQAER ENSP00000348772/1-1244 QLEAGSHSHA SSGPPRAALG KSSYGVAAPV DFLRKQSQLL RSRGPSQAER bmy_07840T0/1-1274 QLEASSHPHA SVGPSRAALA KSSYGGAAPV DFLRKQSQLL RSRGPSQAER BACU003541/1-1272 QLEASSHPHA PVGPSRAALA KSSYGGAAPV DFLRKQSQLL LSRGPSQAER 1251 1300 ENSTTRP00000012587/1-1241 EGPGTPPTTL ARGKARSISL KLDGEE ENSBTAP00000013851/1-1246 EGPGTPPTTL ARGKARSISL KLDSEE ENSP00000348772/1-1244 EGPGTPPTTL ARGKARSISL KLDSEE bmy_07840T0/1-1274 EGPGTPPTTL ARGKARSISL KLDSEE BACU003541/1-1272 EGPGTPPTTL ARGKARSISL KLDSEE