KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:42 2014 Check: 00 .. Name: ENSP00000420617/1-741 Len: 752 Check: 4519 Weight: 1.00 Name: ENSTTRP00000001480/1-704 Len: 752 Check: 790 Weight: 1.00 Name: BACU016609/1-445 Len: 752 Check: 3798 Weight: 1.00 Name: bmy_11694T0/1-499 Len: 752 Check: 4416 Weight: 1.00 Name: ENSBTAP00000013860/1-750 Len: 752 Check: 3269 Weight: 1.00 // 1 50 ENSP00000420617/1-741 --------MA EPVSPLKHFV LAKKAITAIF DQLLEFVTEG SHFVEATYKN ENSTTRP00000001480/1-704 ---------- ---------- ---------- ---------- ------TYKN BACU016609/1-445 ---------- ---------- ---------- ---------- ---------- bmy_11694T0/1-499 --------MA ETASPLKHFV LAKKTITAIF DQLLEFVTEG SHFVEATYKN ENSBTAP00000013860/1-750 GVSVAENIMA ETASPLKHFV LAKKTITAIF DQLLEFVTEG SHFVEATYKN 51 100 ENSP00000420617/1-741 PELDRIATED DLVEMQGYKD KLSIIGEVLS RRHMKVAFFG RTSSGKSSVI ENSTTRP00000001480/1-704 PELDRVATED DLIEIQRYKN KLSIIGEVLS RRHMKVAFFG RTSSGKSSVI BACU016609/1-445 ---------- ---------- ---------- ---MEVAFFG RTSSGKSSVI bmy_11694T0/1-499 PELDRVATED DLIEIQRYKN KLSIIGEVLS RRHMKVAFFG RTSSGKSSVI ENSBTAP00000013860/1-750 PELDRVATED DLIEIQRYKN KLSVIGEVLS RRHMKVAFFG RTSSGKSSVI 101 150 ENSP00000420617/1-741 NAMLWDKVLP SGIGHITNCF LSVEGTDGDK AYLMTEGSDE KKSVKTVNQL ENSTTRP00000001480/1-704 NAMLWDKVLP SGIGHTTNCF LSVEGTDGDK AYLMTEGSDE KKNVKTVNQL BACU016609/1-445 IAMLWDKVLP SGIGDITDCF LSVEETDGDK ACLMTEGSHE KNNVKTVNQL bmy_11694T0/1-499 NAMLWDKVLP SGIGHTTNCF LSVEGTDGDK AYLMTEGSDE KKNVKTVNQL ENSBTAP00000013860/1-750 NAMLWDKVLP SGIGHTTNCF LSVEGTDGDK AYLMTEGSDE KRSVKTVNQL 151 200 ENSP00000420617/1-741 AHALHMDKDL KAGCLVRVFW PKAKCALLRD DLVLVDSPGT DVTTELDSWI ENSTTRP00000001480/1-704 AHALHMDKDL KAGCLVHVFW PKAKCALLRD DLVLVDSPGT DVTTELDSWI BACU016609/1-445 AHALHMDKDL KAGCLVHVFW PKAKCALLRD DLVLVDSPGT DVTGELDSWI bmy_11694T0/1-499 AHALHMDKDL KAGCLVHVFW PKAKCALLRD DLVLVDSPGT DVTTELDSWI ENSBTAP00000013860/1-750 AHALHMDKDL KAGCLVHVFW PKAKCALLRD DLVLVDSPGT DVTTELDSWI 201 250 ENSP00000420617/1-741 DKFCLDADVF VLVANSESTL MNTEKHFFHK VNERLSKPNI FILNNRWDAS ENSTTRP00000001480/1-704 DKFCLDADVF VLVANSESTL MNTEKQFFHK VNERLSKPNI FILNNRWDAS BACU016609/1-445 DKFCLDADVF VLVVNSKSTL MNMEKQFFHK ---------- ---------- bmy_11694T0/1-499 DKFCLDADVF VLVANSESTL MNTEKQFFHK VNERLSKPNI FILNNRWDAS ENSBTAP00000013860/1-750 DKFCLDADVF VLVANSESTL MNTEKQFFHK VNERLSKPNI FILNNRWDAS 251 300 ENSP00000420617/1-741 ASEPEYMEDV RRQHMERCLH FLVEELKVVN ALEAQNRIFF VSAKEVLSAR ENSTTRP00000001480/1-704 ASEPEYMEDV RRQHMERCLH FLVEELKVVD PLEARNRIFF VSAKEVLSAR BACU016609/1-445 ---------- ---------- ---------- ---------- ---------- bmy_11694T0/1-499 ASEPEYMEDV RRQHMERCLH FLVEELKVVD PLEARSRIFF VSAKEVLSAR ENSBTAP00000013860/1-750 ASEPEYMEDV RRQHMERCLH FLVEELRVVD PLEARNRIFF VSAKEVLSAR 301 350 ENSP00000420617/1-741 KQKAQGMPES GVALAEGFHA RLQEFQNFEQ IFEECISQSA VKTKFEQHTI ENSTTRP00000001480/1-704 KHKAQGMPEG GGALAEGFQA RLQEFQNFEQ IFEECISQSA VKTKFEQHTI BACU016609/1-445 ---------- ---------- ---------- --------SA VKTKFEQHTI bmy_11694T0/1-499 KHKAQGMPEG GGALAEGFQA RLQEFQNFEQ IFEECISQSA VKTKFEQHTI ENSBTAP00000013860/1-750 KHKAQGMPEG GGALAEGFQA RLQEFQNFEQ IFEECISQSA VKTKFEQHTI 351 400 ENSP00000420617/1-741 RAKQILATVK NIMDSVNLAA EDKRHYSVEE REDQIDRLDF IRNQMNLLTL ENSTTRP00000001480/1-704 RAKQILETVK NIMDSINVAA AEKRVYSIEE REDQIDRLDF IRNQMNLLTL BACU016609/1-445 RAKQILETVK NIMDSVNMAA AEKRVYSVEE RKDQIDRLDF IRNQMNLLTL bmy_11694T0/1-499 RAKQILETVK NIMDSINVAA AEKRVYSIEE REDQIDRLDF IRNQMNLLTL ENSBTAP00000013860/1-750 RAKQILETVK NIMDSINVAA AEKRVYSIEE REDQIDRLDF IRNQMNLLTL 401 450 ENSP00000420617/1-741 DVKKKIKEVT EEVANKVSCA MTDEICRLSV LVDEFCSEFH PNPDVLKIYK ENSTTRP00000001480/1-704 DVKKKIREVT EEVANKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU016609/1-445 DVKKKIREVT EEVANKVSCA MTDEICRLSV LVDEFCSEFH PTPSVLKVYK bmy_11694T0/1-499 DVKKKIREVT EEVANKVSCA MTDEICRLSV LVDEFCSEFH PTPSVLKVYK ENSBTAP00000013860/1-750 DVKKKIREVT EEVANKVSCA MTDEICRLSV LVDEFCSEFH PTPSVLKVYK 451 500 ENSP00000420617/1-741 SELNKHIEDG MGRNLADRCT DEVNALVLQT QQEIIENLKP LLPAGIQDKL ENSTTRP00000001480/1-704 XELNKHIEDG MGRNLADRCT NEVNASMLQS QQEIIENLKP LLPAGIQNKL BACU016609/1-445 N--------- ---------- ---------- ---------- ---------- bmy_11694T0/1-499 NELNKHIEDG MGRNLADRCT NEVNASMLQS QQEIIGNI-- ---------- ENSBTAP00000013860/1-750 NELNKHIEDG MGRNLADRCT NEVNASMLQS QQEIIENLKP LLPAGIQNKL 501 550 ENSP00000420617/1-741 HTLIPCKKFD LSYNLNYHKL CSDFQEDIVF PFSLGWSSLV HRFLGPRNAQ ENSTTRP00000001480/1-704 HTLIPCKKFD LSYDLNCHKL CSDFQEDIVF HFSLGWSSLV HRFLGPTNAQ BACU016609/1-445 ---------- ---------- ---------- ---------- ---------- bmy_11694T0/1-499 ---------- ----YVCKFV CSFF------ -----FMSLL KDLL------ ENSBTAP00000013860/1-750 HTLVPCKKFD LSYDLNCHKL CSDFQEDIVF RFSLGWASLV HRFLGPTNAQ 551 600 ENSP00000420617/1-741 RVLLGLSEPI FQLPRSLAST PTAPTTPATP DNASQEELMI TLVTGLASVT ENSTTRP00000001480/1-704 RVLLGLSEPI FQLPRSLAST PTAPTNPATP DNASQEELMV TLITALASLT BACU016609/1-445 ---------- --LPRSLAST PTAPTNPATP DNASQEELMV TLITALASLT bmy_11694T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013860/1-750 RVLLGLSEPI FQLPRSLAST PTAPSNPATP DNASQEELMV TLITTLASLT 601 650 ENSP00000420617/1-741 SRTSMGIIIV GGVIWKTIGW KLLSVSLTMY GALYLYERLS WTTHAKERAF ENSTTRP00000001480/1-704 SRTSMGIIVV GGVIWKTVGW KLISVSLSMY GALYLYERLT WTTRAKERAF BACU016609/1-445 SRTSMGIIVV GGVIWKTVGW KLISVSLSMY GALYLYERLT WTTRAKERAF bmy_11694T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013860/1-750 SRTSMGIIVV GGVIWKTVGW KLISVSLSMY GALYLYERLT WTTRAKERAF 651 700 ENSP00000420617/1-741 KQQFVNYATE KLRMIVSSTS ANCSHQVKQQ IATTFARLCQ QVDITQKQLE ENSTTRP00000001480/1-704 KQQFVNYATE KLQLIVSFTS ANCSHQVQQE MATTFARLCQ QVDITQRHLE BACU016609/1-445 KQQFVNYATE KLQLIVSFTS ANCSHQVQQE MATTFARLCQ QVDITQRHLE bmy_11694T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013860/1-750 KQQFVNYATE KLQMIVSFTS ANCSHQVQQE MATTFARLCQ QVDITQRHLE 701 750 ENSP00000420617/1-741 EEIARLPKEI DQLEKIQNNS KLLRNKAVQL ENELENFTKQ FLPSSNEES- ENSTTRP00000001480/1-704 EEIARLSKEI DQLEKIQNNS KRLRNKAVQL ENELENFTKQ FLHSSDEEES BACU016609/1-445 EEIARLSKEI DQLEKIQNNS KRLR-----L RDAIQSFHNR CNTVFQDILR bmy_11694T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013860/1-750 EEIARLSKEI DQLEKIQNNS KLLRNKAVQL ENQLENFTKR FLHSSREEES 751 800 ENSP00000420617/1-741 -- ENSTTRP00000001480/1-704 -- BACU016609/1-445 RK bmy_11694T0/1-499 -- ENSBTAP00000013860/1-750 --