KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:42 2014 Check: 00 .. Name: ENSP00000247668/1-501 Len: 532 Check: 9570 Weight: 1.00 Name: ENSBTAP00000013869/1-525 Len: 532 Check: 8495 Weight: 1.00 Name: ENSTTRP00000002504/1-504 Len: 532 Check: 7693 Weight: 1.00 Name: BACU016115/1-398 Len: 532 Check: 9312 Weight: 1.00 Name: bmy_14826T0/1-296 Len: 532 Check: 9922 Weight: 1.00 // 1 50 ENSP00000247668/1-501 ---------- ------MAAA SVTPPGSLEL LQPGFSKTLL GTKLEAKYLC ENSBTAP00000013869/1-525 -------AWA WWAAALMAAA SVTPPGSLDL LQPGFSKTLL GTKLEDKYLC ENSTTRP00000002504/1-504 ---------- ------MAAA SATPPASLEL LQPGFSKTLL GTKLEDKYLC BACU016115/1-398 MLCSPLGLGL GGAAVLMAAA SATPPGSLDL LQPGFSKTLL GTKLEDKYLC bmy_14826T0/1-296 ---------- ---------- ---------- -------MVE GERLQEH--- 51 100 ENSP00000247668/1-501 SACRNVLRRP FQAQCGHRYC SFCLASILSS GPQNCAACVH EGIYEEGISI ENSBTAP00000013869/1-525 SACKNVLRRP FQAQCGHRYC SFCLSSILSS GPQSCAACVH EGIYEEGVSI ENSTTRP00000002504/1-504 SACRNVLRRP FQAQCGHRYC SFCLSSILSS GPQNCAACVN EGIYEEGVSI BACU016115/1-398 SACRNVLRRP FQAQCGHRYC SFCLSSILSS GPQNCAACVN EGIYEEGVSI bmy_14826T0/1-296 ---------- -EAQRLREHL ALLL-GVLQA GPPPGDGRPL LGQGEQG--- 101 150 ENSP00000247668/1-501 LESSSAFPDN AARREVESLP AVCPSDGCTW KGTLKEYESC HEGRCPLMLT ENSBTAP00000013869/1-525 LESSSAFPDN AARREVESLP AVCPSEGCSW KGTLKDYESC HEGQCPFMLT ENSTTRP00000002504/1-504 LESSSAFPDN AARREVESLP AVCSSEGCTW KGTLKEYESC HEGHCPFVLT BACU016115/1-398 LESSSAFPDN AARREVESLP AVCSSEGCTW KGTLKEYESC HEGHCPFMLT bmy_14826T0/1-296 WGASTPGPGA APSTAAE--- ---------- ---------- -------LLQ 151 200 ENSP00000247668/1-501 ECPACKGLVR LGEKERHLEH ECPERSLSCR HCRAPCCGAD VKAHHEVCPK ENSBTAP00000013869/1-525 ECPACKGLVR LGEKEHHLEH QCPERSLSCR HCRAPCSPAD MKAHHQICPK ENSTTRP00000002504/1-504 ECPACKGLVR LGEKEHHLEH ACPERSLSCR HCRAPCCSAD MKAHHQVCPK BACU016115/1-398 ECPACKGPVR LGEKGHHLEH ECPERSLSCR HCRAPCCLAD MKAHHQVCPK bmy_14826T0/1-296 RCEA------ LERKTATFE- -----NIVCV LNRE------ -------V-- 201 250 ENSP00000247668/1-501 FPLTCDGCGK KKIPREKFQD HVKTCGKCRV PCRFHAIGCL ETVEGEKQQE ENSBTAP00000013869/1-525 FPLTCDGCGK KKIAREKFQD HVRACGRCRV PCRFHAVGCP EMVESEQQPE ENSTTRP00000002504/1-504 FPLTCEGCGK KKITREKFQD HVRTCGRCRV PCRFHAVGCP EMVEGERLQE BACU016115/1-398 FPLTCEG--- ---------- ---------- ---------- ---------- bmy_14826T0/1-296 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000247668/1-501 HEVQWLREHL AMLLSSVLEA KPLL------ ---------G DQSHAGSELL ENSBTAP00000013869/1-525 HEAQRLQEHL ALLLGVLLEA GRPPGDSRLL LRPGEGALEA GTPSRVAELL ENSTTRP00000002504/1-504 HEAQRLREHL ALLLGALLEA GPPL------ ------LSQG EQGHAAAELL BACU016115/1-398 ---------- ---------- ---------- ---------- ---------- bmy_14826T0/1-296 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000247668/1-501 QRCESLEKKT ATFENIVCVL NREVERVAMT AEACSRQHRL DQDKIEALSS ENSBTAP00000013869/1-525 QRCEALERKT ATFENIVCVL NREVERVAVT AEACGRQHRL DQDRIEALSN ENSTTRP00000002504/1-504 QRCEALERKT ATFENIVCVL NREVERVAVT AEACGRQHRL DQDRIEALSN BACU016115/1-398 ---------- ---------- ---------- ---CGKK--- -----KITRE bmy_14826T0/1-296 ---------- ---------- ----ERVAMT AEACGRQHRL DQDRIEALSN 351 400 ENSP00000247668/1-501 KVQQLERSIG LKDLAMADLE QKVLEMEAST YDGVFIWKIS DFARKRQEAV ENSBTAP00000013869/1-525 KVQQLERSIG LKDLAMADLE QKVLEMEAST FDGVFIWKIS DFSRKRQEAV ENSTTRP00000002504/1-504 KVQQLERSIG LKDLAMADLE QKVHEMEAST FDGVFIWKIP DFARKRQEAV BACU016115/1-398 KVQQLERSIG LKDLAMADLE QKVHEMEAST FDGVFIWKIP DFARKRQDAV bmy_14826T0/1-296 KVQQLERSIG LKDLAMADLE QKVHEMEAST FDGVFIWKIP DFARKRQEAV 401 450 ENSP00000247668/1-501 AGRIPAIFSP AFYTSRYGYK MCLRIYLNGD GTGRGTHLSL FFVVMKGPND ENSBTAP00000013869/1-525 AGRTPAIFSP AFYTSRYGYK MCLRAYLNGD GTGRGTHLSL FFVLMRGPHD ENSTTRP00000002504/1-504 AGRTPAIFSP AFYTSRYGYK MCLRAYLNGD GTGRGTHLSL FFVLMKGPHD BACU016115/1-398 AGRTPAIFSP AFYTSRYGYK MCLRAYLNGD GTGRGTHLSL FFVLMKGPHD bmy_14826T0/1-296 AGRTPAIFSP AFYTSRYGYK MCLRAYLNGD GTGRGTHLSL FFVLMKGPHD 451 500 ENSP00000247668/1-501 ALLRWPFNQK VTLMLLDQNN REHVIDAFRP DVTSSSFQRP VNDMNIASGC ENSBTAP00000013869/1-525 ALLRWPFNQK VTLMLLDQNN REHVIDAFRP DVTSSSFQRP VGDMNIASGC ENSTTRP00000002504/1-504 ALLHWPFNQK VTLMLLDQNN REHVIDAFRP DVTSSSFQRP VSDMNIASGC BACU016115/1-398 ALLRWPFNQK VTLMLLDQNN REHVIDAFRP DVTSSSFQRP VSDMNIASGC bmy_14826T0/1-296 ALLRWPFNQK VTLMLLDQNN REHVIDAFRP DVTSSSFQRP VSDMNIASGC 501 550 ENSP00000247668/1-501 PLFCPVSKME AKNSYVRDDA IFIKAIVDLT GL ENSBTAP00000013869/1-525 PLFCPVSKME AKNSYVRDDA IFIKAIVDLT GL ENSTTRP00000002504/1-504 PLFCPVSKME AKNSYVRDDA IFIKAIVDLT GL BACU016115/1-398 PLFCPVSKME AKNSYVRDDA IFIKAIVDLT GL bmy_14826T0/1-296 PLFCPVSKME AKNSYVRDDA IFIKAIVDLT GL