KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:51:43 2014  Check: 00 ..

 Name: bmy_11286T0/1-225         Len:    227  Check:  2852  Weight:  1.00
 Name: ENSP00000325414/1-196     Len:    227  Check:  3317  Weight:  1.00
 Name: BACU001446/1-222          Len:    227  Check:  122  Weight:  1.00
 Name: ENSBTAP00000013876/1-198  Len:    227  Check:  6573  Weight:  1.00

//


                          1                                                   50
bmy_11286T0/1-225         MSLDFVPRTV GSREPVSSNR GCHPERKDGA SRGCMRHHQR TRCGKVLTRR 
ENSP00000325414/1-196     ---------- ---------- ---------M VGGLKRKHSD LEEEE--ERW 
BACU001446/1-222          -----MLKGD SVKGRGLYRA DVWLDGPGIM VGGLKRKHSD LEEEEEDEKW 
ENSBTAP00000013876/1-198  ---------- ---------- ---------M VGGLKRKHSD LEEEEEDEKW 


                          51                                                 100
bmy_11286T0/1-225         R--PRGLRSY QQALLRISLD KVQRSLGPRA PSLRRHVLIH NTLQQLQAAL 
ENSP00000325414/1-196     EWSPAGLQSY QQALLRISLD KVQRSLGPRA PSLRRHVLIH NTLQQLQAAL 
BACU001446/1-222          NWGPAGLRSY QQALLRISLD KVQRSLGPRA PSLRRHVLIH NTLQQLQAAL 
ENSBTAP00000013876/1-198  DWSPAGLRSY QQALLRISLD KVQRSLGPRA PSLRRHVLIH NTLQQLQAAL 


                          101                                                150
bmy_11286T0/1-225         CLTPAPALPP EPLFLGEEDF SLSATIGSIL RELETSMDET EPPQNPVAPP 
ENSP00000325414/1-196     RLAPAPALPP EPLFLGEEDF SLSATIGSIL RELDTSMDGT EPPQNPVTPL 
BACU001446/1-222          CLTPAPALPP EPLFLGEEDF SLSATIGSIL RELETSMDET EPPQNPVAPP 
ENSBTAP00000013876/1-198  CLTPAPALPP EPLFLGEEDF SLSATIGSIL RELETSMDET EPPQNPAAPP 


                          151                                                200
bmy_11286T0/1-225         GPQNEVLPQP DPVFLEALSS RYLGDSGLDD FFLDIDTSAV EKEPSLAPPE 
ENSP00000325414/1-196     GLQNEVPPQP DPVFLEALSS RYLGDSGLDD FFLDIDTSAV EKEPARAPPE 
BACU001446/1-222          GPQNEVLPQP DPVFLEALSS RYLGDSGLDD FFLDIDTSAV EKEPSLAPPE 
ENSBTAP00000013876/1-198  SPQNEVLPQP DPVFLEALSS RYLGDSGLDD FFLDIDTSAV EKEPAVAPPE 


                          201                                                250
bmy_11286T0/1-225         PPHNLFCAPG SWEWNELDHI MEIILGS 
ENSP00000325414/1-196     PPHNLFCAPG SWEWNELDHI MEIILGS 
BACU001446/1-222          PPHNLFCAPG SWEWNELDHI MEIILGS 
ENSBTAP00000013876/1-198  PPHNLFCAPG SWEWNELDHI MEIILGS