KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:45 2014 Check: 00 .. Name: ENSP00000313034/1-566 Len: 566 Check: 4707 Weight: 1.00 Name: ENSBTAP00000013887/1-565 Len: 566 Check: 8738 Weight: 1.00 Name: ENSTTRP00000002210/1-561 Len: 566 Check: 1844 Weight: 1.00 Name: bmy_14827T0/1-362 Len: 566 Check: 5538 Weight: 1.00 Name: BACU016114/1-421 Len: 566 Check: 4397 Weight: 1.00 // 1 50 ENSP00000313034/1-566 MDEGGTPLLP DSLVYQIFLS LGPADVLAAG LVCRQWQAVS RDEFLWREQF ENSBTAP00000013887/1-565 MDEGETPLLP DSLVYQIFLS LGPADVLAAG LACRQWQAVS RDECLWREQF ENSTTRP00000002210/1-561 MDEGGLPLLP DSLVYHIFLN LGPADVLAAG LVCHQWQAVS RDEFLWREQF bmy_14827T0/1-362 MDEGGTPLLP DSLVYQIFLN LGPADVLAAG LVCHQWQAVS RDEFLWREQF BACU016114/1-421 MDEGGTPLLP DSLVYQIFLN LGPADVLAAG LVCHQWQAVS RDEFLWREQF 51 100 ENSP00000313034/1-566 YRYYQVARDV PRHPAAMSWY EEFQRLYDTV PCVEVQTLRE HTDQVLHLSF ENSBTAP00000013887/1-565 YRYYQVARDV PRHPAATSWF EEFRRLYDAV PCVEVQTLRE HTDQVLHLSF ENSTTRP00000002210/1-561 YRYYQVARNV PRHPAATSWY EEFRRLYDTV PCVEVQTLEE HTDQVLHLSF bmy_14827T0/1-362 YRYYQVARNV PRHPAATSWY EEFRRLYDTV PCVEVQTLEE HTDQVLHLSF BACU016114/1-421 YRYYQVARSV PRHPAATSWY EEFRRLYDTV PCVEVQTLKE HTDQVLHLSF 101 150 ENSP00000313034/1-566 SHSGYQFASC SKDCTVKIWS NDLTISLLHS ADMRPYNWSY TQFSQFNKDD ENSBTAP00000013887/1-565 SHSGYQFASC SKDCTVKIWN NDPTISLLHS ADMRPYNWSY TQFSQFNQDD ENSTTRP00000002210/1-561 SHSGYQFASC SKDCTVKIWN NDLTISLLHS ADMRPYNWSY TQFSQFNQDD bmy_14827T0/1-362 SHSGYQFASC SKDCTVKIWN NDLTISLLHS ADMRPYNWSY TQFSQFNQDD BACU016114/1-421 SHSGYQFASC SKDCTVKIWN NDLTISLLHS ADMRPYNWSY TQFSQFNQDD 151 200 ENSP00000313034/1-566 SLLLASGVFL GPHNSSSGEI AVISLDSFAL LSRVRNKPYD VFGCWLTETS ENSBTAP00000013887/1-565 SLLLASGVFL GPHNSSSGEI AVISLDTFAL LSRVRNKPYD VFGCWLTDTS ENSTTRP00000002210/1-561 SLLLASGVFL GPHNSSSGEI AVISLDTFAL LSRVRNKPYD VFGCWLTDTS bmy_14827T0/1-362 SLLLASGVFL GPHNSSSGEI AVISL----- ---------- ---------- BACU016114/1-421 SLLLASGVFL GPHNSSSGEI AVISL----- ---------- ---------- 201 250 ENSP00000313034/1-566 LISGNLHRIG DITSCSVLWL NNAFQDVESE NVNVVKRLFK IQNLNASTVR ENSBTAP00000013887/1-565 LISGNLHRIG DITSCSVLWL NNAFQDVESE NVNVVKRLFK IQNLNASTIR ENSTTRP00000002210/1-561 LISGNLHRIG DITSCSVLWL NNAFQDVESE NVNVVKRLFK IQNLNASTIR bmy_14827T0/1-362 ---------- ---------- ---------- ---------- ---------- BACU016114/1-421 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000313034/1-566 TVMVADCSRF DSPDLLLEAG DPATSPCRIF DLGSDNEEVV AGPAPAHAKE ENSBTAP00000013887/1-565 TVMVADCSRF DSPDLLLDAG APGTDSSRVF DLGSDGEDEE SDPGPARAK- ENSTTRP00000002210/1-561 TVMVADCSRF DSPELLLDAG APGAGPGCVF DLSSDSEDQA VDPGPARAK- bmy_14827T0/1-362 ---------- ---------- ---------- ---------- ---------- BACU016114/1-421 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000313034/1-566 GLRHFLDRVL EGRAQPQLSE RMLETKVAEL LAQGHTKPPE RSATGAKSKY ENSBTAP00000013887/1-565 GLRRLLDGFL EGRAQPPLPE STLETKVAKL LAQGHTKPPE QGRAAAGNKL ENSTTRP00000002210/1-561 GLRR----VL EGRAQPQPSE CALETKAAEL LAQGHTKPPE RSTAAAGNKL bmy_14827T0/1-362 ---------- ---------- ---------- ---GETGP-- ---------- BACU016114/1-421 ---------- ---------E CALETKAAEL LAQGHTKPPE HGSAAAGSKL 351 400 ENSP00000313034/1-566 LIFTTGCLTY SPHQIGIKQI LPHQMTTAGP VLGEGRGSDA FFDALDHVID ENSBTAP00000013887/1-565 LIFTTGCLTY SPHQIGIKQI LPHQMTTAGP VLGEGRGSDA FFDALDHVID ENSTTRP00000002210/1-561 LIFTTGCFTY SPHQIGIKQI LPHQMTTAGP VLGEGRGSDA FFDALDHVID bmy_14827T0/1-362 ---------- ---------- ---------- ---RGRGSDA FFDALDHVID BACU016114/1-421 LIFTTGCFTY SPHQIGIKQI LPHQMTTAGP VLGEGRGSDA FFDALDHVID 401 450 ENSP00000313034/1-566 IHGHIIGMGL SPDNRYLYVN SRAWPNGAVV ADPMQPPPIA EEIDLLVFDL ENSBTAP00000013887/1-565 VHGHIIGMGL SPDNRYLYVN SRAWPSGSVV ADPMQPPPIA EEIDLLVFDL ENSTTRP00000002210/1-561 VHGHIIGMGL SPDNRYLYVN SRAWPRGSVV ADPMQPPPIA EEIDLLVFDL bmy_14827T0/1-362 VHGHIVGMGL SPDNRYLYVN SRAWPSGSVV ADPMQPPPIA EEIDLLVFDL BACU016114/1-421 VHGHIIGMGL SPDNRYLYVN SRAWPSGSVV ADPMQPPPIA EEIDLLVFDL 451 500 ENSP00000313034/1-566 KTMREVRRAL RAHRAYTPND ECFFIFLDVS RDFVASGAED RHGYIWDRHY ENSBTAP00000013887/1-565 KTMREVKRAL RAHRAYTPND ECFFIFLDVS RDFVASGAED RHGYIWDRHY ENSTTRP00000002210/1-561 KTMREVKRAL RAHRAYTPND ECFFIFLDVS RDFVASGAED RHGYIWDRHY bmy_14827T0/1-362 KTMREVKRAL RAHRAYTPND ECFFIFLDVS RDFVASGAED RHGYIWDRHY BACU016114/1-421 KTMREVKRAL RAHRAYTPND ECFFIFLDVS RDFVASGAED RHGYIWGRHY 501 550 ENSP00000313034/1-566 NICLARLRHE DVVNSVVFSP QEQELLLTAS DDATIKAWRS PRTMRVLQAP ENSBTAP00000013887/1-565 NICLAKLRHE DVVNSVVFSP QEQELLLTAS DDATIKAWRS PRTVRVLQAP ENSTTRP00000002210/1-561 NICLAKLRHQ DVVNSVVFSP QEQELLLTAS DDATIKAWRS PRTVRVHQAP bmy_14827T0/1-362 NICLAKLRHQ DVVNSVVFSP QEQELLLTAS DDATIKAWRS PRTFLGLHAA BACU016114/1-421 NICLAKLRHQ DVVNSVVFSP QEQELLLTAS DDATIKAWRS PRTFLGLHAA 551 600 ENSP00000313034/1-566 RPRPRTFFSW LASQRR ENSBTAP00000013887/1-565 RPRPRPFFSW FASQKH ENSTTRP00000002210/1-561 RPRPRPFFSW FASQRR bmy_14827T0/1-362 QP-PACHGVG KGDSGS BACU016114/1-421 QP-PACHGVG KGDSGS