KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:45 2014 Check: 00 .. Name: ENSP00000357920/1-369 Len: 385 Check: 7647 Weight: 1.00 Name: ENSBTAP00000013892/1-341 Len: 385 Check: 2986 Weight: 1.00 Name: ENSTTRP00000005750/1-369 Len: 385 Check: 4330 Weight: 1.00 Name: bmy_05578T0/1-385 Len: 385 Check: 9626 Weight: 1.00 Name: BACU014216/1-385 Len: 385 Check: 9614 Weight: 1.00 // 1 50 ENSP00000357920/1-369 --MRPARHWE TRFGARDFGG ----FQDCFF R--------- -DRLMDTARI ENSBTAP00000013892/1-341 ---------- ---------- ---------- ---------- ----MDTVRI ENSTTRP00000005750/1-369 --TRPTTHWE TSFGARAFGG ----FQGCLF R--------- -DRPMGTVRI bmy_05578T0/1-385 MPARKVVFGE AVDLRKEPSG PSFVLDGITL ETRFVAHTVP PHRPMDTVRI BACU014216/1-385 MPARKVVFGE AVDLRKEPSG PSFVLDGITL ETRFVAHTVP PHRPMDTVRI 51 100 ENSP00000357920/1-369 AVVGAGVVGL STAVCISKLV PRCSVTIISD KFTPDTTSDV AAGMLIPHTY ENSBTAP00000013892/1-341 AVVGAGVMGL STAVCISKMV PGCSITVISD KFTPETTSDV AAGMLIPPTY ENSTTRP00000005750/1-369 ATVGAGVMGL STAVCISKLV PRCSITVISE QFSPETTSDV AAGMLIPPVY bmy_05578T0/1-385 AAVGAGVVGL STAVCISKLV PQCSITVISD QFSPETTSDV AAGMLIPPVY BACU014216/1-385 AAVGAGVVGL STAVCISKLV PRCSITVISD QFTPETTSDV AAGMLIPPVY 101 150 ENSP00000357920/1-369 PDTPIHTQKQ WFRETFNHLF AIANSAEAGD AGVHLVSGWQ IFQSTPTEEV ENSBTAP00000013892/1-341 PDTPIQKQKQ WFKETFDHLF AIVNSAEAED AGVILVSGWQ IFQSIPTEEV ENSTTRP00000005750/1-369 PDTPIHKQKQ WFKETFDHLF TIANSAEAED AGVLLVSGWQ IFRSIPTEEV bmy_05578T0/1-385 PDTPIHKQKR WFKETFDHLF AIANSAEAED AGVLLVSGWQ IFRSIPTEEV BACU014216/1-385 PDTPIHKQKQ WFKETFDHLF AIANSAEAED AGVLLVSGWQ IFRSIPTEEV 151 200 ENSP00000357920/1-369 PFWADVVLGF RKMTEAELKK FPQYVFGQAF TTLKCECPAY LPWLEKRIKG ENSBTAP00000013892/1-341 PYWADVVLGF RKMTKDELKK FPQHVFGHAF TTLKCEGPAY LPWLQKRVKG ENSTTRP00000005750/1-369 PFWADVVLGF RKMTEDELKK FPQHVFGQAF TTLKCEGPVY LPWLEKRLKG bmy_05578T0/1-385 PFWADVVLGF RKMTEDELKK FPQHVFGQAF TTLKCEGPAY LPWLEKRLKG BACU014216/1-385 PFWADVVLGF RKMTEDELKK FPQHVFGQAF TTLKCEGPAY LPWLEKRLKG 201 250 ENSP00000357920/1-369 SGGWTLTRRI EDLWELHPSF DIVVNCSGLG SRQLAGDSKI FPVRGQVLQV ENSBTAP00000013892/1-341 NGGLILTRRI EDLWELHPSF DIVVNCSGLG SRQLAGDSKI FPVRGQVLKV ENSTTRP00000005750/1-369 SGGLILTRRI EDLWELHPSF DIVVNCSGLG SRQLAGDPKI FPVRGQVLKV bmy_05578T0/1-385 SGGLILTRRV EDLWELHPSF DIVVNCSGLG SRQLAGDPKI FPVRGQVLKV BACU014216/1-385 SGGLILTRRV EDLWELHPSF DIVVNCSGLG SRQLAGDPKI FPVRGQVLKV 251 300 ENSP00000357920/1-369 QAPWVEHFIR DGSGLTYIYP GTSHVTLGGT RQKGDWNLSP DAENSREILS ENSBTAP00000013892/1-341 QAPWVKHFIR DSSGLTYIYP GISNVTLGGT RQKGDWNLSP DAEISKEILS ENSTTRP00000005750/1-369 QAPWVKHFIR DGSGLTYIYP GISNVTLGGT RQKGDWNLSP DAEISKGILS bmy_05578T0/1-385 QAPWVKHFIR DGSGLTYIYP GISNVTLGGT RQKGDWNLSP DAEISKGILS BACU014216/1-385 QAPWVKHFIR DGSGLTYIYP GISNVTLGGT RQKGDWNLSP DAEISKGILS 301 350 ENSP00000357920/1-369 RCCALEPSLH GACNIREKVG LRPYRPGVRL QTELLARDGQ RLPVVHHYGH ENSBTAP00000013892/1-341 RCCALEPSLR GAYDLREKVG LRPTRPGVRL EKELLAQDSR RLPVVHHYGH ENSTTRP00000005750/1-369 RCCALEPSLH GACDIREKVG LRPTRPGVRL EKELLAQGSR RLPVVHHYGH bmy_05578T0/1-385 RCCALEPSLH GACDIREKVG LRPTRPGVRL EKELLAQGSR RLPVVHHYGH BACU014216/1-385 RCCALEPSLH GACDIREKVG LRPTRPGVRL EKELLAQGSR RLPVVHHYGH 351 400 ENSP00000357920/1-369 GSGGISVHWG TALEAARLVS ECVHALRTPI PKSNL ENSBTAP00000013892/1-341 GSGGIAMHWG TALEATRLVN ECVQVLRTPA PKSKL ENSTTRP00000005750/1-369 GSGGIAMHWG TALEAARLVS ECAQALRTPA PKSKL bmy_05578T0/1-385 GSGGIAMHWG TALEAARLVS ECAQALRTPA PKSKL BACU014216/1-385 GSGGIAMHWG TALEAARLVS ECAQALRTPA PKSKL