KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:47 2014 Check: 00 .. Name: ENSTTRP00000008224/1-1367 Len: 1372 Check: 1414 Weight: 1.00 Name: ENSP00000251636/1-1369 Len: 1372 Check: 7791 Weight: 1.00 Name: ENSBTAP00000013897/1-1367 Len: 1372 Check: 9102 Weight: 1.00 Name: bmy_10764T0/1-1301 Len: 1372 Check: 1520 Weight: 1.00 Name: BACU016751/1-1318 Len: 1372 Check: 1379 Weight: 1.00 // 1 50 ENSTTRP00000008224/1-1367 MGGKNKKHKA PGAAAVRAAV SASRAKSAEA GAAGEAQNKK PAVRPPPSAA ENSP00000251636/1-1369 MGGKNKKHKA PAAAVVRAAV SASRAKSAEA GIAGEAQSKK PVSRPATAAA ENSBTAP00000013897/1-1367 MGGKNKKHKT PGAAAVRAAV SASRAKSSEA GATGEAQNKK PVSRPAPAAA bmy_10764T0/1-1301 MGGKNKKHKA PGAAAVRAAV SASRAKSAEA GAAGEAQNKK PVVRPPPSAA BACU016751/1-1318 MGGKNKKHKA PGAAAVRAAV SASRAKSAEA GAAGEAQNKK PVVRPPPSAA 51 100 ENSTTRP00000008224/1-1367 TSS-TRDPRV KQGPKIYSFN SANDSGGPAN LDKSILKVVI NNKLEQKIIG ENSP00000251636/1-1369 AAAGSREPRV KQGPKIYSFN STNDSSGPAN LDKSILKVVI NNKLEQRIIG ENSBTAP00000013897/1-1367 AS--TREPRV KQVPKIYSLL EIKEELGKVQ TSKSSIHVVI NNKLEQKIIG bmy_10764T0/1-1301 TS--TRDPRV KQGPKIYSFN SANDSGGPAN LDKSILKVVI NNKLEQKIIG BACU016751/1-1318 TS--TRDPRV KQGPKIYSFN SANDSGGPAN LDKSILK--- ---------- 101 150 ENSTTRP00000008224/1-1367 VINEHKKQNN DKGVISGRLT AKKLQDLYMA LQAFSFKTKD IEDAMTNTLL ENSP00000251636/1-1369 VINEHKKQNN DKGMISGRLT AKKLQDLYMA LQAFSFKTKD IEDAMTNTLL ENSBTAP00000013897/1-1367 VINEHKKQNN NKGVISGRLT AKKLQDLYMA LQAFSFKTKD IEDAMTNTLL bmy_10764T0/1-1301 VINEHKKQNN DKGVISGRLT AKKLQDLYMA LQAFSFKTKD IEDAMTNTLL BACU016751/1-1318 ---------- ---------- -----DLYMA LQAFSFKTKD IEDAMTNTLL 151 200 ENSTTRP00000008224/1-1367 HGGDLHSALD WLCLNLSDDA LPEGFSQEFE EQQPLSRPKF QSPQIQATIS ENSP00000251636/1-1369 YGGDLHSALD WLCLNLSDDA LPEGFSQEFE EQQPKSRPKF QSPQIQATIS ENSBTAP00000013897/1-1367 HGGDLHSALD WLCLNLSDDA LPEGFSQEFE EQQPKSRPKF QYPQTQATIS bmy_10764T0/1-1301 HGGDLHSALD WLCLNLSDDA LPEGFSQEFE EQQPL----- ---------- BACU016751/1-1318 HGGDLHSALD WLCLNLSDDA LPEGFSQEFE EQQPLSRPKF QSPQIQATIS 201 250 ENSTTRP00000008224/1-1367 PPLQSKTKKQ EEDPMIKPKK EEKNLEVNMK EWILRYAEQQ NEEEKSETSK ENSP00000251636/1-1369 PPLQPKTKTY EEDPKSKPKK EEKNMEVNMK EWILRYAEQQ NEEEKNENSK ENSBTAP00000013897/1-1367 PPLQPKTKKR EEDPKIMPKK DEKKLEVNMK EWILRYAEQQ N-EEKSETSK bmy_10764T0/1-1301 ---------- ---------- ------INMK EWILRYAEQQ NEEEKT---- BACU016751/1-1318 PPLQSKTKKQ EEDPKIKPKK EEKNLEVNMK EWILRYAEQQ NEEEKSETSK 251 300 ENSTTRP00000008224/1-1367 SL-EEEKFDP NERYLHLAAK LLDAKEQAAT FKLKKNNQGQ KKAQKKIKKF ENSP00000251636/1-1369 SLEEEEKFDP NERYLHLAAK LLDAKEQAAT FKLEKNKQGQ KEAQEKIRKF ENSBTAP00000013897/1-1367 SL-EEEKFDP NERYLHLAAK LLDAKEQAAA FKLEKNKQGQ KEAQEKIRKF bmy_10764T0/1-1301 ---------- ---------K LLDAKEQAAT FKLEKNKQGQ KEAQEKIRKF BACU016751/1-1318 SL-EEEKFDP NERYLHLAAK LLDAKEQAAT FKLEKNKQGQ KEAQEKIRKF 301 350 ENSTTRP00000008224/1-1367 QR-XXXXXXX XXXXXXAIKI SHQQNERKKP SVATEGESAL NFNLFEKSTA ENSP00000251636/1-1369 QR-EMETLED HPVFNPAMKI SHQQNERKKP PVATEGESAL NFNLFEKSAA ENSBTAP00000013897/1-1367 QRVEMETLED HPVFNPAIKI SYQQNERKKP PVVTEGESAL NFNLFEKSAA bmy_10764T0/1-1301 QR-EMETLED HPVFNPAIKI SHQQNERKKP PVATEGESAL NFNLFEKSTA BACU016751/1-1318 QR-EMETLED HPVFNPAIKI SHQQNERKKP PVATEGESAL NFNLFEKSTA 351 400 ENSTTRP00000008224/1-1367 ATEEEKEKKK EPHDVRNFDY TARSWTGKSP KQFLIDWVRK NLPKSPNPSF ENSP00000251636/1-1369 ATEEEKDKKK EPHDVRNFDY TARSWTGKSP KQFLIDWVRK NLPKSPNPSF ENSBTAP00000013897/1-1367 APEEEKEKKK EPHDVRNFDY TARSWTGKSP KQFLIDWVRK NLPKSPNPSF bmy_10764T0/1-1301 ATEEEKEKKK EPHDVRNFDY TARSWTGKSP KQFLIDWVRK NLPKSPNPSF BACU016751/1-1318 ATEEEKEKKK EPHDVRNFDY TARSWTGKSP KQFLIDWVRK NLPKSPNPSF 401 450 ENSTTRP00000008224/1-1367 EKVAVGRYWK CRVRVIKSED DVLVVCPTIL TEDGMQAQHL GATLALYRLV ENSP00000251636/1-1369 EKVPVGRYWK CRVRVIKSED DVLVVCPTIL TEDGMQAQHL GATLALYRLV ENSBTAP00000013897/1-1367 EKVAVGRYWK CRVRVIKSED DVLVVCPTIL TEDGMQAQHL GATLALYRLV bmy_10764T0/1-1301 EKVAVGRYWK CRVRVIKSED EVLVVCPTIL TEDGMQAQHL GATLALYRLV BACU016751/1-1318 EKVAVGRYWK CRVRVIKSED DVLVVCPTIL TEDGMQAQHL GATLALYRLV 451 500 ENSTTRP00000008224/1-1367 KGQSVHQLLP PTYRDVWLEW SDAEKRKEQL NKMETNKPRD LFIAKLLNKL ENSP00000251636/1-1369 KGQSVHQLLP PTYRDVWLEW SDAEKKREEL NKMETNKPRD LFIAKLLNKL ENSBTAP00000013897/1-1367 KGQSVHQLLP PTYRDVWLEW SDAEKKKEEL NKMETNKPRD LFIAKLLNKL bmy_10764T0/1-1301 KGQSVHQLLP PTYRDVWLEW SDAEKRKEQL NKMETNKPRD LFIAKLLNKL BACU016751/1-1318 KGQSVHQLLP PTYRDVWLEW SDAEKRKEQL NKMETNKPRD LFIARLLNKL 501 550 ENSTTRP00000008224/1-1367 KQQQQQQQQQ SENTRETSED PEESWENLVS DEDFSALSLE SEKAEDLEPV ENSP00000251636/1-1369 KQQQQQQQQH SENKRENSED PEESWENLVS DEDFSALSLE SANVEDLEPV ENSBTAP00000013897/1-1367 KQQQQQQQQH SENKRENSED PEESWENLVS DEDFSALSLE SEKVEDLEPV bmy_10764T0/1-1301 KQQQQQQQQH SENTRETSED PEESWENLVS DEDFSALSLE SEKAEDLEPV BACU016751/1-1318 KQQQQQQQQH SENTRETSED PEESWENLVS DEDFSALSLE SEKAEDLEPV 551 600 ENSTTRP00000008224/1-1367 RNLFRKLQST PKYQRLLKER QQLPVFKHRN SIVETLRRHR AXXXXXXXXX ENSP00000251636/1-1369 RNLFRKLQST PKYQKLLKER QQLPVFKHRD SIVETLKRHR VVVVAGETGS ENSBTAP00000013897/1-1367 RNLFRKLQST PKYQRLLKER QQLPVFKHRS SVVETLKRHR VVVVAGETGS bmy_10764T0/1-1301 RNLFRKLQST PKYQRLLKER QQLPVFKHRN SIVETLRRHR AVVVAGETGS BACU016751/1-1318 RNLFRKLQST PKYQRLLKER QQLPVFKHRN SIVETLRRHR AVVVAGETGS 601 650 ENSTTRP00000008224/1-1367 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000251636/1-1369 GKSTQVPHFL LEDLLLNE-W EASKCNIVCT QPRRISAVSL ANRVCDELGC ENSBTAP00000013897/1-1367 GKSTQVPHFL LEDLLLNE-W GTTKCNIVCT QPRRISAVSL ATRVCDELGC bmy_10764T0/1-1301 GKSTQVPHFL LEDLLLNE-W QTSRCSIVCT QPRRVSAVSL ATRVCDELGC BACU016751/1-1318 GKSTQVPHFL LEDLLLNE-W QTSRCSIVCT QPRRVSAVSL ATRVCDELGC 651 700 ENSTTRP00000008224/1-1367 XXXXXXXNSL CGYQIRMESR VSESTRLLYC TTGVLLRKLQ EDGLLTNVSH ENSP00000251636/1-1369 ENGPGGRNSL CGYQIRMESR ACESTRLLYC TTGVLLRKLQ EDGLLSNVSH ENSBTAP00000013897/1-1367 ENGPGGKNSL CGYQIRMESR ASESTRLLYC TTGVLLRKLQ EDGLLTNVSH bmy_10764T0/1-1301 ENGPGGKNSL CGYQIRMESR VSESTRLLYC TTGVLLRKLQ EDGLLTNVSH BACU016751/1-1318 ENGPGGKNSL CGYQIRMESR VSESTRLLYC TTGVLLRKLQ EDGLLTNVSH 701 750 ENSTTRP00000008224/1-1367 VIVDEVHERS VQSDFLLIIL KEILQKRSDL HLILMSATVD SEKFSSYFIH ENSP00000251636/1-1369 VIVDEVHERS VQSDFLLIIL KEILQKRSDL HLILMSATVD SEKFSTYFTH ENSBTAP00000013897/1-1367 VIVDEVHERS VQSDFLLIIL KEILQKRSDL HLILMSATVD CEKFSTYFTH bmy_10764T0/1-1301 VIVDEVHERS VQSDFLLIIL KEILQKRSDL HLILMSATVD SEKFSSYFIH BACU016751/1-1318 VIVDEVHERS VQSDFLLIIL KEILQKRSDL HLILMSATVD SEKFSSYFIH 751 800 ENSTTRP00000008224/1-1367 CPILRISGRN YPVEVFHLED IIEETGFVLE KDSEYCQKFL EEEEEITVNV ENSP00000251636/1-1369 CPILRISGRS YPVEVFHLED IIEETGFVLE KDSEYCQKFL EEEEEVTINV ENSBTAP00000013897/1-1367 CPILRISGRS YPVEVFHLED IIEETGFVLE KDSEYCQKFL EEEEEITINV bmy_10764T0/1-1301 CPILRISGRN YPVEVFHLED IIEETGFVLE KDSEYCQKFL EEEEEITVNV BACU016751/1-1318 CPILRISGRN YPVEVFHLED IIEETGFVLE KDSEYCQKFL EEEEEITINV 801 850 ENSTTRP00000008224/1-1367 TSKAGGIQKY QEYIPVQTGT SDDLNPFYQK YSNRTQHAIL YMNPHKINLD ENSP00000251636/1-1369 TSKAGGIKKY QEYIPVQTGA HADLNPFYQK YSSRTQHAIL YMNPHKINLD ENSBTAP00000013897/1-1367 TTKAGGIKKY QEYIPVQTGT SADLNPFYQK YSSRTQHAIL YMNPHKINLD bmy_10764T0/1-1301 TSKAGGIKKY QEYIPVQTGT SDDLNPFYQK YSNRTQHAIL YMNPHKINLD BACU016751/1-1318 TSKAGGIKKY QEYIPVQTGT SDDLNPFYQK YSNRTQHAIL YMNPHKINLD 851 900 ENSTTRP00000008224/1-1367 LILELLTYLD RSPQFKNVEG AVLIFLPGLA HIQQLYDLLS TDRRFFSERY ENSP00000251636/1-1369 LILELLAYLD KSPQFRNIEG AVLIFLPGLA HIQQLYDLLS NDRRFYSERY ENSBTAP00000013897/1-1367 LILELLTYLD RSPQFKNVEG AVLIFLPGLA HIQQLYDLLS TDRRFFSERY bmy_10764T0/1-1301 LILELLTYLD RSPQFKNVEG AVLIFLPGLA HIQQLYDLLS TDRRFFSERY BACU016751/1-1318 LILELLTYLD RSPQFKNVEG AVLIFLPGLA HIQQLYDLLS TDRRFFSERY 901 950 ENSTTRP00000008224/1-1367 KVIALHSILS TQDQAAAFTL PPQGVRKIVL ATNIAETGIT IPDVVFVIDT ENSP00000251636/1-1369 KVIALHSILS TQDQAAAFTL PPPGVRKIVL ATNIAETGIT IPDVVFVIDT ENSBTAP00000013897/1-1367 KVIALHSILS TQDQAAAFTL PPQGVRKIVL ATNIAETGIT IPDVVFVIDT bmy_10764T0/1-1301 KVIALHSILS TQDQAAAFTL PPQGVRKIVL ATNIAETGIT IPDVVFVIDT BACU016751/1-1318 KVIALHSILS TQDQAAAFTL PPQGVRKIVL ATNIAETGIT IPDVVFVIDT 951 1000 ENSTTRP00000008224/1-1367 GRTKENKYHE SSQMSSLVET FVSKASALQR QGRAGRVRGG FCFRMYTRER ENSP00000251636/1-1369 GRTKENKYHE SSQMSSLVET FVSKASALQR QGRAGRVRDG FCFRMYTRER ENSBTAP00000013897/1-1367 GRTKENKYHE SSQMSSLVET FVSKASALQR QGRAGRVRDG FCFRMYTRER bmy_10764T0/1-1301 GRTKENKYHE SSQMSSLVET FVSKASALQR QGRAGRVRGG FCFRMYTRER BACU016751/1-1318 GRTKENKYHE SSQMSSLVET FVSKASALQR QGRAGRVRGG FCFRMYTRER 1001 1050 ENSTTRP00000008224/1-1367 FEGFMDYSVP EILRVPLEEL CLHIMKCNLG SPEDFLSKAL DPPQLQVISN ENSP00000251636/1-1369 FEGFMDYSVP EILRVPLEEL CLHIMKCNLG SPEDFLSKAL DPPQLQVISN ENSBTAP00000013897/1-1367 FEGFMDYSVP EILRVPLEEL CLHIMKCNLG SPEDFLSKAL DPPQLQVISN bmy_10764T0/1-1301 FEGFMDYSVP EILRVPLEEL CLHIMKCNLG SPEDFLSKAL DPPQLQVISN BACU016751/1-1318 FEGFMDYSVP EILRVPLEEL CLHIMKCNLG SPEDFLSKAL DPPQLQVISN 1051 1100 ENSTTRP00000008224/1-1367 AMNLLRKIGA CELNEPKLTP LGQHLAALPV NVKIGKMLIF GAIFGCLDPV ENSP00000251636/1-1369 AMNLLRKIGA CELNEPKLTP LGQHLAALPV NVKIGKMLIF GAIFGCLDPV ENSBTAP00000013897/1-1367 AMNLLRKIGA CELNEPKLTP LGQHLAALPV NVKIGKMLIF GAIFGCLDPV bmy_10764T0/1-1301 AMNLLRKIGA CELNEPKLTP LGQHLAALPV NVKIGKMLIF GAIFGCLDPV BACU016751/1-1318 AMNLLRKIGA CELNEPKLTP LGQHLAALPV NVKIGKMLIF GAIFGCLDPV 1101 1150 ENSTTRP00000008224/1-1367 ATLAAVMTEK SPFTTPIGRK DEADLAKSAL AMADSDHLTI YNAYLGWKKA ENSP00000251636/1-1369 ATLAAVMTEK SPFTTPIGRK DEADLAKSAL AMADSDHLTI YNAYLGWKKA ENSBTAP00000013897/1-1367 ATLAAVMTEK SPFITPIGRK DEADLAKSAL AMADSDHLTI YNAYLGWKKA bmy_10764T0/1-1301 ATLAAVMTEK SPFTTPIGRK DEADLAKSAL AMADSDHLTI YNAYLGWKKA BACU016751/1-1318 ATLAAVMTEK SPFTTPIGRK DEADLAKSAL AMADSDHLTI YNAYLGWKKA 1151 1200 ENSTTRP00000008224/1-1367 RQEGGYRSEI AYCRRNFLNR TSLLTLEXXX XXXXKLVKAA GFLSSTTSSG ENSP00000251636/1-1369 RQEGGYRSEI TYCRRNFLNR TSLLTLEDVK QELIKLVKAA GFSSSTTSTS ENSBTAP00000013897/1-1367 RQEGGYRSEI AYCRKNFLNR TSLLTLEDVK QELIKLVKAA GFLSSTTSNS bmy_10764T0/1-1301 RQEGGYRSEI AYCRRNFLNR TSLLTLEDVK QELIKLVKAA GFLSSTTSSG BACU016751/1-1318 RQEGGYRSEI AYCRRNFLNR TSLLTLEDVK QELIKLVKAA GFLSSTTSSG 1201 1250 ENSTTRP00000008224/1-1367 FEGNRASQTL SFQEIALLKA VLTAGLYDNV GKIIYTKSVD VTEKLACIVE ENSP00000251636/1-1369 WEGNRASQTL SFQEIALLKA VLVAGLYDNV GKIIYTKSVD VTEKLACIVE ENSBTAP00000013897/1-1367 FEGNRATQTL SFQEIALLKA VLTAGLYDNV GKIIYTKSVD ITEKLACIVE bmy_10764T0/1-1301 LEGNRASQTL SFQEIALLKA VLTAGLYDNV GKIIYTKSVD VTEKLACIVE BACU016751/1-1318 LEGNRASQIL SFQEIALLKA VLTAGLYDNV GKIIYTKSVD VTEKLACIVE 1251 1300 ENSTTRP00000008224/1-1367 TAQGKAQVHP SSVNRDLQTY GWLLYQEKIR YARVYLRETT LITPFPVLLF ENSP00000251636/1-1369 TAQGKAQVHP SSVNRDLQTH GWLLYQEKIR YARVYLRETT LITPFPVLLF ENSBTAP00000013897/1-1367 TAQGKAQVHP SSVNRDLQIY GWLLYQEKIR YARVYLRETT LITPFPVLLF bmy_10764T0/1-1301 TAQGKAQVHP SSVNRDLQTY GWLLYQEKIR YARVYLRETT LITPFPVLLF BACU016751/1-1318 TAQGKAQVHP SSVNRDLQTY GWLLYQEKIR YARVYLRETT LITPFPVLLF 1301 1350 ENSTTRP00000008224/1-1367 GGDIEVQHRE RLLSVDGWIY FQXXXXXXXX XXXXXXLIDS VLR-KLENPK ENSP00000251636/1-1369 GGDIEVQHRE RLLSIDGWIY FQAPVKIAVI FKQLRVLIDS VLRKKLENPK ENSBTAP00000013897/1-1367 GGDIEVQHRE RLISVDGWIY FQAPVKIAVI FKQLRVLIDS VLRKKLENPK bmy_10764T0/1-1301 GGDIEVQHRE RLLSVDGWIY FQAPVKIAVI FKQLRILIDS VLRKKLENPK BACU016751/1-1318 GGDIEVQHRE RLLSVDGWIY FQAPVKIAVI FKQLRILIDS VLRKKLENPK 1351 1400 ENSTTRP00000008224/1-1367 MSLENDKILQ IITELIKTEN N- ENSP00000251636/1-1369 MSLENDKILQ IITELIKTEN N- ENSBTAP00000013897/1-1367 MSLENDKILQ IITELIKTEN NN bmy_10764T0/1-1301 MSLENDKILQ IITELIKTE- -- BACU016751/1-1318 MSLESKCLII M--------- --