KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:51:51 2014 Check: 00 .. Name: ENSP00000316675/1-326 Len: 332 Check: 8811 Weight: 1.00 Name: ENSBTAP00000013902/1-329 Len: 332 Check: 4841 Weight: 1.00 Name: bmy_16102T0/1-297 Len: 332 Check: 3402 Weight: 1.00 Name: BACU012084/1-297 Len: 332 Check: 3433 Weight: 1.00 // 1 50 ENSP00000316675/1-326 MRTEAQVPAL QPPEPGLEGA MGH-RTLVLP WVLLTLCVTA GTPEVWVQVR ENSBTAP00000013902/1-329 -NTSAVPTTT APWSPGQRGA MDRPRALGLL WVLLTLCLTA GTPEVWLQVQ bmy_16102T0/1-297 ---------- ---------- MDRPRALGLL LALLTLCITA GTPEVWVQVQ BACU012084/1-297 ---------- ---------- MDRPRALGLL LALLTLCITA GTPEVWVQVQ 51 100 ENSP00000316675/1-326 MEATELSSFT IRCGFLGSGS ISLVTVSWGG PNGAGGTTLA VLHPERGIRQ ENSBTAP00000013902/1-329 REATE-ASFT VRCGFLGSGS ISLVTVSYGG PDSAGGTTLA VLHPTLGTKN bmy_16102T0/1-297 MEATGSPSFT VRCGFLGSGS ISLVTVSYGG PDGAGGTTLA VLHPKFGTQH BACU012084/1-297 MEATGSPSFT VRCGFLGSGS ISLVTVSYGG PDGAGGTTLA VLHPKFGTQH 101 150 ENSP00000316675/1-326 WAPARQARWE TQSSISLILE G--SGASSPC ANTTFCCKFA SFPEGSWEAC ENSBTAP00000013902/1-329 WTAACRARWE TSTSISLTLE RAPTAAGDSS PNTTFCCKFT SFPEGSQEAC bmy_16102T0/1-297 WNPACRAHWE TRASISLTLE G--SEGRSSS PSTTFCCKFT SFPEGSQEAC BACU012084/1-297 WNPACRAHWE TRTSISLTLE G--SEGRSSS PNTTFCCKFT SFPEGSQEAC 151 200 ENSP00000316675/1-326 GSLPPSSDPG LSAPPTPAPI LRADLAGILG VSGVLLFGCV YLLHLLRRHK ENSBTAP00000013902/1-329 GKLSASTDQE LPA-PSPASV LRADLAGILG VSGVLLSGCI YLLYLLRRQR bmy_16102T0/1-297 GNLSLSPDQG LPA-PTPATM LRADLAGILG VSGVLLFGCV YLLYLLRRQR BACU012084/1-297 GNLSLNPDQG LPA-PTPATM LRADLAGILG VSGVLLFGCV YLLYLLRRQR 201 250 ENSP00000316675/1-326 HRPAPRLQPS RTSPQAPRAR AWAPSQASQA ALHVPYATIN TS---CRPAT ENSBTAP00000013902/1-329 HWSVMKLQPP RHGSPQTDGR TSAAGQASLT SFHVPYATAA TTSNYFSPAT bmy_16102T0/1-297 HWSVMKLQPP RHSSPQTQRR ASAAGQASLT SLHIPYATIN TS--YFSPAT BACU012084/1-297 HWSVMKLQPL RHSSPQTQRR ASAAGQASLT SLHIPYATIN TS--YFSPAT 251 300 ENSP00000316675/1-326 LDTAHPHGGP SWWASLPTHA AHRPQGPAAW ASTPIPARGS FVSVENGLYA ENSBTAP00000013902/1-329 LHPVPPPQPL PGWVPPLTHA ARRPQSPGPW APPPASARSS FVSVENRLYA bmy_16102T0/1-297 LHRVLPPQPL PGWAPLPS-- ----QSPVPW APLPASTRSS FISVENRLYA BACU012084/1-297 LHRVLPPQPL PGWVPLPS-- ----QSPVPW APLPASARSS FISVENRLYA 301 350 ENSP00000316675/1-326 QAGERPPHTG PGLTLFPDPR GPRAMEGPLG VR ENSBTAP00000013902/1-329 QTEKRPLHAG ADHISLPDRL GRKAALGPSG VR bmy_16102T0/1-297 QAEKGPLHAG TDLIPLPDCL GHRAMEG--- -R BACU012084/1-297 QAEKGPLHAG TDLIPLPDCL GRRAMEG--- -R