KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:52 2014 Check: 00 .. Name: ENSTTRP00000014735/1-412 Len: 582 Check: 1787 Weight: 1.00 Name: bmy_00725T0/1-325 Len: 582 Check: 4417 Weight: 1.00 Name: BACU020339/1-413 Len: 582 Check: 2051 Weight: 1.00 Name: ENSP00000378405/1-412 Len: 582 Check: 9207 Weight: 1.00 Name: ENSBTAP00000013909/1-412 Len: 582 Check: 1544 Weight: 1.00 // 1 50 ENSTTRP00000014735/1-412 ---------- ---------- ---------- ---------- ---------- bmy_00725T0/1-325 FQRAYFIEQK TEAQRDQITP GALWRELCYL FGDLGAETQP RWAGASCESS BACU020339/1-413 ---------- ---------- ---------- ---------- ---------- ENSP00000378405/1-412 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013909/1-412 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014735/1-412 ---------- ---------- ---------- ---------- ---------- bmy_00725T0/1-325 APNYNSQEAP GAHSPRDVTA AEGASGSASP AGGLLGRSSR TPALALAPRW BACU020339/1-413 ---------- ---------- ---------- ---------- ---------- ENSP00000378405/1-412 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013909/1-412 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014735/1-412 ---------- ---------- ---------- ---------- ---------- bmy_00725T0/1-325 ELLLEAELVS ILDRLSPLKS EKCPCPPTPF LPRFGVASIY PVLSPSGRPV BACU020339/1-413 ---------- ---------- ---------- ---------- ---------- ENSP00000378405/1-412 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013909/1-412 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000014735/1-412 ------MILA SVLGSGPRGG PALWPLLGPS LSLRARSTSA TDTHHVEMAR bmy_00725T0/1-325 RQKSKTMILA SVLGSGPRGG PALWPLLGPA LSLRARSTSA TDTHHVEMAR BACU020339/1-413 ------MILA SVLGSGPRGG PALWPLLGPA LSLRARSTSA TDTHHVEMAR ENSP00000378405/1-412 ------MILA SVLRSGPGGG LPLRPLLGPA LALRARSTSA TDTHHVEMAR ENSBTAP00000013909/1-412 ------MILA SVLGSGPRGG PPLRPLLGPA LSLRARSTSA TDTHHVEMAR 201 250 ENSTTRP00000014735/1-412 ERSKTVTSFX XXXXXXXXXX X--------- -----XXXXX XXXXXXXXXX bmy_00725T0/1-325 ERSKTVTSFY NQSAIDVAAE K--------- -----PSVRL TPTMMLYSGR BACU020339/1-413 ERSKTVTSFY NQSAIDVAAE KGVRDPVLKG PLPLQPSVRL TPTMMLYSGR ENSP00000378405/1-412 ERSKTVTSFY NQSAIDAAAE K--------- -----PSVRL TPTMMLYAGR ENSBTAP00000013909/1-412 ERSKTVTSFY NQSAIDVAAE K--------- -----PSVRL TPTMMLYSGR 251 300 ENSTTRP00000014735/1-412 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXHELYI bmy_00725T0/1-325 SQDGSHLL-- ---------- ---------- ---------- -----HELYI BACU020339/1-413 SQDGSHLLVG TG-------- --GCSLPGAQ SIP--VNSHT SSLQ-HELYI ENSP00000378405/1-412 SQDGSHLLKS ARYLQQELPV RIAHRIKGFR CLPFIIGCNP TILHVHELYI ENSBTAP00000013909/1-412 SQDGSHLLKS ARYLQQELPV RIAHRIKGFR SLPFIIGCNP TILHVHELYI 301 350 ENSTTRP00000014735/1-412 RAFQKLTDFP PIKDQTDDAQ YCQLVRQLLD DHKDVVTLLA EGLRESRKHI bmy_00725T0/1-325 RAFQKLTDFP PIKDQADDAQ YCQLVRQLLD DHKDVVTLLA EGLRESRKHI BACU020339/1-413 RAFQKLTDFP PIKDQADDAQ YCQLVRQLLD DHKDVVTLLA EGLRESRKHI ENSP00000378405/1-412 RAFQKLTDFP PIKDQADEAQ YCQLVRQLLD DHKDVVTLLA EGLRESRKHI ENSBTAP00000013909/1-412 RAFQKLTDFP PIKDQADEAR YCQLVRQLLD DHKDVVTLLA EGLRESRKYI 351 400 ENSTTRP00000014735/1-412 EDEKLVRYFL DKTLTSRLGI RMLATHHLAL HEDKPDFVGI ICTRLSPKKI bmy_00725T0/1-325 E--------- ---------- ---------- ----PDFVGI ICTRLSPKKI BACU020339/1-413 EDEKLVRYFL DKTLTSRLGI RMLATHHLAL HEDKPDFVGI ICTRLSPKKI ENSP00000378405/1-412 EDEKLVRYFL DKTLTSRLGI RMLATHHLAL HEDKPDFVGI ICTRLSPKKI ENSBTAP00000013909/1-412 EDEKLVRYFL DKTLTSRLGI RMLATHHLAL HEDKPDFVGI ICTRLSPKKI 401 450 ENSTTRP00000014735/1-412 IEKWVDFARR LCEHKYGNAP RVRINGHVAA RFPFIPMPLD YILPELLKNA bmy_00725T0/1-325 IEKWVDFAR- ---------- ---------- ---------- ---------- BACU020339/1-413 IEKWVDFARR LCEHKYGNAP RVRINGHVAA RFPFIPMPLD YILPELLKNA ENSP00000378405/1-412 IEKWVDFARR LCEHKYGNAP RVRINGHVAA RFPFIPMPLD YILPELLKNA ENSBTAP00000013909/1-412 IEKWVDFARR LCEHKYGNAP RVRINGHVAA RFPFIPMPLD YILPELLKNA 451 500 ENSTTRP00000014735/1-412 MRATMESHLD TPYNVPDVVI TIANNDIDLV IRISDRGGGI AHKDLDRVMD bmy_00725T0/1-325 ---------- ---------- ---------- ---------- ---------- BACU020339/1-413 MRATMESHLD TPYNVPDVVV TIANNDIDLV IRISDRGGGI AHKDLDRVMD ENSP00000378405/1-412 MRATMESHLD TPYNVPDVVI TIANNDVDLI IRISDRGGGI AHKDLDRVMD ENSBTAP00000013909/1-412 MRATMESHLD TPYNVPDVVI TIANNDIDLV IRISDRGGGI AHKDLDRVMD 501 550 ENSTTRP00000014735/1-412 YHFTTAEAST QDPRISPLFG HLDLHSGGQS GPMHGFGFGL PTSRAYAEYL bmy_00725T0/1-325 ---------- ---------- ---------- ---------- ---------- BACU020339/1-413 YHFTTAEAST QDPRISPLFG HLDLHSGGQS GPMHGFGFGL PTSRAYAEYL ENSP00000378405/1-412 YHFTTAEAST QDPRISPLFG HLDMHSGAQS GPMHGFGFGL PTSRAYAEYL ENSBTAP00000013909/1-412 YHFTTAEAST QDPRISPLFG HLDLHSGGQS GPMHGFGFGL PTSRAYAEYL 551 600 ENSTTRP00000014735/1-412 GGSLRLQSLQ GIGTDVYLRL RHIDGREESF RI bmy_00725T0/1-325 ---------- ---------- ---------- -- BACU020339/1-413 GGSLRLQSLQ GIGTDVYLRL RHIDGREESF RI ENSP00000378405/1-412 GGSLQLQSLQ GIGTDVYLRL RHIDGREESF RI ENSBTAP00000013909/1-412 GGSLRLQSLQ GIGTDVYLRL RHIDGREESF RI