KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:53 2014 Check: 00 .. Name: ENSBTAP00000013925/1-602 Len: 602 Check: 9888 Weight: 1.00 Name: ENSP00000216106/1-601 Len: 602 Check: 4450 Weight: 1.00 Name: BACU000882/1-601 Len: 602 Check: 5215 Weight: 1.00 Name: ENSTTRP00000010774/1-590 Len: 602 Check: 5494 Weight: 1.00 Name: bmy_01183T0/1-405 Len: 602 Check: 9252 Weight: 1.00 // 1 50 ENSBTAP00000013925/1-602 MAYDDSVKKE DCFDGDHSFE DIGLAAGRSQ REKKRSYKDF LREEEEIAAQ ENSP00000216106/1-601 MAYDDSVKKE DCFDGDHTFE DIGLAAGRSQ REKKRSYKDF LREEEEIAAQ BACU000882/1-601 MAYDDSVKKE DCFDGDHSFE DIGLAAGRSQ REKKRSYKDF LREEEEIAAQ ENSTTRP00000010774/1-590 MAYDDSVKKE DCFDGDHSFE DIGLAAGRSQ REKKRSYKDF LREEEEIAAQ bmy_01183T0/1-405 MAYDDSVKKE DCFDGDHSFE DIGLAAGRSQ REKKRSYKDF LREEEEIAAQ 51 100 ENSBTAP00000013925/1-602 VRNSSKKKLK DSELYFLGTD THRKKRKHSS DDYYYGDISS LEPSQKKKKK ENSP00000216106/1-601 VRNSSKKKLK DSELYFLGTD THKKKRKHSS DDYYYGDISS LESSQKKKKK BACU000882/1-601 VRNSSKKKLK DSELYFLGTD THKKKRKHSS DDYYYGDISS LESSQKKKKK ENSTTRP00000010774/1-590 VRNSSKKKLK DSELYFLGTD THKKKRKHSS DDYYYGDISS LESSQKKKKK bmy_01183T0/1-405 VRNSSKKKLK DSELYFLGTD THKKKRKHSS DDYYYGDISS LESSQKKKKK 101 150 ENSBTAP00000013925/1-602 SSPQSADTAM DLLKAITSPL ATGAKPSKKI GEKSSSSSSH SESKKEHHRK ENSP00000216106/1-601 SSPQSTDTAM DLLKAITSPL AAGSKPSKKT GEKSSGSSSH SESKKEHHRK BACU000882/1-601 SSPQSADTAM DLLKAITSPL ATGTKPSKKT GEKSSSSSSH SESKKEHHRK ENSTTRP00000010774/1-590 SSPQSTDTAM DLLKAITSPL ATGTKPSKKT GEKSSSSSSH SESKKEHHRK bmy_01183T0/1-405 SSPQSADTAM DLLKAITSPL ATGTKPSKKT GEKSSSSSSH SESKKEHHRK 151 200 ENSBTAP00000013925/1-602 KVSGSSGELS LEDGSSHKSK KMKPLYVNTE TLTLREPDGL KMKLILSPKE ENSP00000216106/1-601 KVSGSSGELP LEDGGSHKSK KMKPLYVNTE TLTLREPDGL KMKLILSPKE BACU000882/1-601 KVSGSSGELS LEDGGSHKSK KMKPLYVNTE TLTLREPDGL KMKLILSPKE ENSTTRP00000010774/1-590 KVSGSSGELS LEDGGSHKSK KMKPLYVNTE TLTLREPDGL KMKLILSPKE bmy_01183T0/1-405 KVSGSSGELS LEDGGSHKSK KMKPLYVNTE TLTLREPDGL KMKLILSPKE 201 250 ENSBTAP00000013925/1-602 KGSSSVDEES FQYPSQQGTV KKSSKKSARD EQGALLLGHE LQSFLKTARK ENSP00000216106/1-601 KGSSSVDEES FQYPSQQATV KKSSKKSARD EQGALLLGHE LQSFLKTARK BACU000882/1-601 KGSSSVDEES FQYPSQQATV KKSSKKSARD EQGALLLGHE LQSFLKTARK ENSTTRP00000010774/1-590 KGSSSVDEES FQYPSQQATV KKSSKKSARD EQGALLLGHE LQSFLKTARK bmy_01183T0/1-405 KGSSSVDEES FQYPSQQATV KKSSKKSARD EQGALLLGHE LQSFLKTARK 251 300 ENSBTAP00000013925/1-602 KHKSSSDPRS SPGPEGCGSE ASQFPESHSA NLDLSGLEPI LVESDSSSGG ENSP00000216106/1-601 KHKSSSDAHS SPGPEGCGSD ASQFAESHSA NLDLSGLEPI LVESDSSSGG BACU000882/1-601 KHKSSSDSRS SPGPEGCGSD TSQFPESHSA NLDLSGLEPI LVESDSSSGG ENSTTRP00000010774/1-590 KHKSSSDSRS SPGPEGCGSD ASQFPESHSA NLDLSGLEPI LVESDSSSGG bmy_01183T0/1-405 KHKSSSDSRS SPGPEGCGSD ASQFPESHSA NLDLSGLEPI LVESDSSSGG 301 350 ENSBTAP00000013925/1-602 ELEAGELVID DSYREIKKKK KSKKSKKKKD KEKHKEKRHS KSKRSSGLPP ENSP00000216106/1-601 ELEAGELVID DSYREIKKKK KSKKSKKKKD KEKHKEKRHS KSKRSLGLSA BACU000882/1-601 ELEAGELVID DSYREIKKKK KSKKSKKKKD KEKHKEKRHS KSKRSSGLPA ENSTTRP00000010774/1-590 ELEAGELVID DSYREIKKKK KSKKSKKKKD KEKHKERRHS KSKRSSGLPA bmy_01183T0/1-405 ELEAGELVID DSYREIKKKK KSKKSKKKKD KEKHKEKRHS KSKRSSGLPA 351 400 ENSBTAP00000013925/1-602 AAVAGEVPVP PVPAPSLPYA GAPTPPPPLP SLHTDGHNEK KKKREEKDRE ENSP00000216106/1-601 VPV-GEVTVT SGPPPSIPYA GAAAPPLPLP GLHTDGHSEK KKKKEEKDKE BACU000882/1-601 AAV-GEVPAP PGPPPSVPYT GAAAPPPPLP GLHADGHSEK KKKREEKDKE ENSTTRP00000010774/1-590 AAV-GEVPAP PGPPPSIPYT GAAAPPPPLP GLHTDGHSEK KKKREEKDKE bmy_01183T0/1-405 AAV-GEVPAP PGPPPSIPYT GAAAPPPXLP GLHADGHGEK KKKREEKDKE 401 450 ENSBTAP00000013925/1-602 RDRGEKPKKK NMSAYQVFCK EYRVTIVADH PGIDFGELSK KLAEVWKQLP ENSP00000216106/1-601 RERGEKPKKK NMSAYQVFCK EYRVTIVADH PGIDFGELSK KLAEVWKQLP BACU000882/1-601 RDRAEKPKKK NMSAYQVFCK EYRVTIVADH PGIDFGELSK KLAEVWKQLP ENSTTRP00000010774/1-590 RDRGEKPKKK NMSAYQVFCK EYRVTIVADH PGIDFGELSK KLAEVWKQLP bmy_01183T0/1-405 RDRGEK---- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000013925/1-602 EKDKLVWKQK AQYLQHKQNK AEATTVKRKA SSSEGSMKVK ASSMGVLSPQ ENSP00000216106/1-601 EKDKLIWKQK AQYLQHKQNK AEATTVKRKA SSSEGSMKVK ASSVGVLSPQ BACU000882/1-601 EKDKLIWKQK AQYLQHKQNK AEATTVKRKA SSSEGSMKVK ASPAGVLSPQ ENSTTRP00000010774/1-590 EKDKLIWKQK AQYLQHKQNK AEATTVKRKA SSSEGSMKVK ASSAGVLSPQ bmy_01183T0/1-405 ---------- ---------- ---------- ---------- ---------- 501 550 ENSBTAP00000013925/1-602 KKSPPTAMLL PASPAKAPET EPIDVAAHLQ LLGESLSLIG HRLQETEGMV ENSP00000216106/1-601 KKSPPTTMLL PASPAKAPET EPIDVAAHLQ LLGESLSLIG HRLQETEGMV BACU000882/1-601 KKSPPTTMLL PASPAKAPET EPIDVAAHLQ LLGESLSLIG HRLQETEGMV ENSTTRP00000010774/1-590 KKSPPTTMLL PASPAKAPET EPIDVAAHLQ LLGESLSLIG HRLQETEGMV bmy_01183T0/1-405 ---------- ---------- ---------- ---------- ---------- 551 600 ENSBTAP00000013925/1-602 AVSGSLSVLL DSIICALGPL ACLTTQLPEL NGCPKQVLSN TLDNIAYIMP ENSP00000216106/1-601 AVSGSLSVLL DSIICALGPL ACLTTQLPEL NGCPKQVLSN TLDNIAYIMP BACU000882/1-601 AVSGSLSVLL DSIICALGPL ACLTTQLPEL NGCPKQVLSN TLDNIAYIMP ENSTTRP00000010774/1-590 AVSGSLSVLL DSIICVLGPL ACVTTR---- -------LSN TLDNIAYIMP bmy_01183T0/1-405 ---------- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000013925/1-602 GL ENSP00000216106/1-601 GL BACU000882/1-601 GL ENSTTRP00000010774/1-590 GL bmy_01183T0/1-405 --