KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:55 2014 Check: 00 .. Name: ENSP00000350869/1-294 Len: 336 Check: 6207 Weight: 1.00 Name: ENSBTAP00000013938/1-309 Len: 336 Check: 5950 Weight: 1.00 Name: ENSTTRP00000001916/1-317 Len: 336 Check: 7976 Weight: 1.00 Name: bmy_08386T0/1-253 Len: 336 Check: 9211 Weight: 1.00 Name: BACU018565/1-292 Len: 336 Check: 8822 Weight: 1.00 // 1 50 ENSP00000350869/1-294 MEYPAPATVQ AADGGAAGPY SSSELLEGQE PDGVRFDRER ARRLWEAVSG ENSBTAP00000013938/1-309 MEYPALGTVE NADSGGARSY NNSEEREGRE PDGLRFDRER ARRLWEAVSG ENSTTRP00000001916/1-317 MEYSALGTAE AADSGAARPY NNSEEREGRE PDGLRFDRER ARRLWEAVSG bmy_08386T0/1-253 MEYSALGTAE AADSGAARPY NNSEQREGRE PDGLRFDRER ARRLWEAVSG BACU018565/1-292 MEYSALGTAE AADSGAARPY NNSEEREGRE PDGLRFDRER ARRLWEAVSG 51 100 ENSP00000350869/1-294 AQPVGREE-- ---------- ---------- ----VEHMIQ KNQCLFTNTQ ENSBTAP00000013938/1-309 SQPVGREE-- ---------- ---------- ----VEHMIQ KNQCLFTNTQ ENSTTRP00000001916/1-317 AQPVGREEAY FFLNLRTGIP VHAVSETLNL ---PLEHMIQ KNQCLFTSTQ bmy_08386T0/1-253 AQPVGREE-- ---------- ---------- ----VEHMIQ KNQCLFTNTQ BACU018565/1-292 AQPVGREEGY LFLNLRTRIL RAFLTQRFFI FLSVVEHMIQ KNQCLFTNTQ 101 150 ENSP00000350869/1-294 CKVCCALLIS ESQKLAHYQS KKHANKVKRY LAIHGMETLK GETKKLDSDQ ENSBTAP00000013938/1-309 CKVCCALLIS ESQKLAHYQS KKHANKVKRY LAIHGMETLK GEMKRLDSDQ ENSTTRP00000001916/1-317 CKVCCALLIS ESQKLAHYQS KKHANKVKRY LAIHGMETLK GDTKKLDSDQ bmy_08386T0/1-253 CKVCCALLIS ESQKLAHY-- ---------- ---------- ---------- BACU018565/1-292 CKVCCALLIS ESQKLAHYQS KKHANKVKRY LAIHGMETLK GDTKKLDSDQ 151 200 ENSP00000350869/1-294 KSSRSKDKNQ CCPICNMTFS SPVVAQSHYL GKTHAKNLKL KQQSTKVE-- ENSBTAP00000013938/1-309 KSSRSKDKNQ CCPICNMTFS SPVVAQSHYL GKTHAKNLKL KQQSTKVEAL ENSTTRP00000001916/1-317 KSSRSKDKNQ CCPICNMTFS SPVVAQSHYL GKTHAKNLKL KQQSTKVE-- bmy_08386T0/1-253 ---------- ---------- -----QSHYL GKTHAKNLKL KQQSTKVEAL BACU018565/1-292 KSSRSKDKNQ CCPICNMTFS SPVVAQSHYL GKTHAKNLKL KQQSTKVE-- 201 250 ENSP00000350869/1-294 ---------- ----ALHQNR EMIDPDKFCS LCHATFNDPV MAQQHYVGKK ENSBTAP00000013938/1-309 SKRLTNPFLM ASTLALHQNR EMIDPDKFCS LCHATFNDPV MAQQHYVGKK ENSTTRP00000001916/1-317 ---------- ----ALHQNR EMIDPDKFCS LCHATFNDPV MAQQHYMGKK bmy_08386T0/1-253 SKRLTNPFLV ASTLALHQNR EMIDPDKFCS LCHATFNDPV MAQQHYMGKK BACU018565/1-292 ---------- ----ALHQNR EMIDPDKFCS LCHATFNDPV MAQQHYMGKK 251 300 ENSP00000350869/1-294 HRKQETKLKL MARYGRLADP AVTDFPAGKG YPCKTCKIVL NSIEQYQAHV ENSBTAP00000013938/1-309 HRKQETKLKL MAHYGRLADP AVTD-SAGKG YPCKTCKIVL NSIEQYQAHV ENSTTRP00000001916/1-317 HRKQETKLKL MAHYGRLADP AVTDSSAGKG YACKTCKIVL NSIEQYQAHV bmy_08386T0/1-253 HRKQETKLKL MAHYGRLADP AVTDSSAGKG YACKTCKIVL NSIEQYQAHV BACU018565/1-292 HRKQETKLKL MAHYGRLADP AVADSSAGKG YACKTCKIVL NSIEQYQAHV 301 350 ENSP00000350869/1-294 SGFKHKNQSP KTVASSLGQI PMQRQPIQKD STTLED ENSBTAP00000013938/1-309 SGFKHKNQSP KTVASPLGQI PTQRQSIQKD STTLEN ENSTTRP00000001916/1-317 SGFKHKNQSP KTMASPLGQI PMQRQPIHKD SATLEN bmy_08386T0/1-253 SGFKHKNQSP KTVASPLGQI PMQRQPIHKD STTLEN BACU018565/1-292 SGFKHKNQ-- ---------- ---------- ------