KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:57 2014 Check: 00 .. Name: ENSP00000325919/1-264 Len: 285 Check: 470 Weight: 1.00 Name: ENSBTAP00000013953/1-264 Len: 285 Check: 7559 Weight: 1.00 Name: ENSTTRP00000011626/1-264 Len: 285 Check: 9549 Weight: 1.00 Name: bmy_02422T0/1-283 Len: 285 Check: 9054 Weight: 1.00 Name: BACU017076/1-266 Len: 285 Check: 5349 Weight: 1.00 // 1 50 ENSP00000325919/1-264 MFVPCGESAP DLAGFTLLMP AVSVGNVGQL AMDLIISTLN MSKIGYFYTD ENSBTAP00000013953/1-264 MFVPSGDSVP DLAGCTLLMP AVSVGNVGQL AIDLIISTLN MHKIGYFYTD ENSTTRP00000011626/1-264 MFVPCGDSVP DLAGCTLLMP AVSVGNVGQL AIDLIISTLN MYKIGYFYTD bmy_02422T0/1-283 MFVPCGDSVP DLAGCTLLMP AVSVGNVGQL AIDLIISTLN MCKIGYFYTD BACU017076/1-266 MFVPCGDSVP DLSGCTLLMP AVSVGNVGQL AIDLIISTLN MCKIGYFYTD 51 100 ENSP00000325919/1-264 CLVPMVGNNP YATTEGNSTE LSINAEVYSL PSRKLVALQL RSIFI----- ENSBTAP00000013953/1-264 CLVPMVGNNP YATAEENSAE LSINAEVYAL PSKKLVALQL RSIFI----- ENSTTRP00000011626/1-264 CLVPMVGNNP YATAEENSTE LSINAEVYAS PSKKLVALQL RSIFI----- bmy_02422T0/1-283 CLVPMVGNNP YATAEENSTE LSINAEVYAS PSKKLVALQL RSIFIKSKDR BACU017076/1-266 CLVPMVGNNP YATAEENSTE LSINAEVYAS PSKKLVALQL RSIFI----- 101 150 ENSP00000325919/1-264 ---------- ----KYKSKP FCEKLLSWVK SSGCARVIVL SSSHSYQRND ENSBTAP00000013953/1-264 ---------- ----KYKSKS FCEKLLSWVK CSGCAKVVVL SSSHSYHRND ENSTTRP00000011626/1-264 ---------- ----KYKSKS FCEKLLFWVK SSNCAKVVVL SSSHSYHRND bmy_02422T0/1-283 SNFSIFVLFF QWYTKYKSKS FCEKLLSWVK SSNCAKVVVL SSSHSYHRND BACU017076/1-266 ---------- ----KYKSKS FCEKLLSWVK SSNCAKVVVL SSSHSYHRND 151 200 ENSP00000325919/1-264 LQLRSTPFRY LLTPSMQKSV QNKIKSLNWE EMEKSRCIPE IDDSEFCIRI ENSBTAP00000013953/1-264 LQLRSTPFRY LLTPSMQKSV QNKIQSLNWE EMEKTPCIPE IDDSEFCVRV ENSTTRP00000011626/1-264 FQLRSTPFRY LLTPSTKKSV QNKIQSLNWE EMEKSPCIPE IDDSEFCVRI bmy_02422T0/1-283 LQLRSTPFRY LLTPSMQKSV QNKIQSLNWE EMEKSPCIPE IDDSEFCVRI BACU017076/1-266 LQLRSTPFRY LLTPSMQKSV QNKIQSLNWE EMEKSPCIPE IDDSEFCVRI 201 250 ENSP00000325919/1-264 PGGGITKTLY DESCSKEIQM AVLLKFVSEG DNIPDALGLV EYLNEWLQIL ENSBTAP00000013953/1-264 PGGGITKLLY DEGCSKEIPI AILLKFVSEG DNIPDALGLV EYLNEWLQII ENSTTRP00000011626/1-264 PGGGITKTLY DEGCSKEIPM VILLKFVSEG DNIPDALGLV EYLNEWLQII bmy_02422T0/1-283 PGGGITKTLY DEGCSKEIPM VILLKFVSEG DNIPDALGLV EYLNEWLQII BACU017076/1-266 PGGGITKTLY DEGCSKEIPM VILLKFVSEG DNIPDALGLV EYLNEWLQII 251 300 ENSP00000325919/1-264 KPL--SDDPT VSASRWKIPS SWRLLFGSGL PPALF ENSBTAP00000013953/1-264 KPH--CEDPT ASSLPWKMPS SWRLLFGSGL PPALF ENSTTRP00000011626/1-264 KPC--CDDPS ASALPWKMPS SWRLLFGSGL PPALF bmy_02422T0/1-283 KPC--CDDPS ASALPWKMPS SWRLLFGSGL PPALF BACU017076/1-266 KPCLQCDDPS ASALPWKMPS SWRLLFGSGL PPALF