KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:59 2014 Check: 00 .. Name: ENSTTRP00000011632/1-386 Len: 528 Check: 3087 Weight: 1.00 Name: ENSP00000311857/1-415 Len: 528 Check: 809 Weight: 1.00 Name: BACU017077/1-495 Len: 528 Check: 8280 Weight: 1.00 Name: bmy_02423T0/1-451 Len: 528 Check: 5220 Weight: 1.00 Name: ENSBTAP00000013969/1-388 Len: 528 Check: 8406 Weight: 1.00 // 1 50 ENSTTRP00000011632/1-386 ---------- ---------- ---------- ---------- ---------- ENSP00000311857/1-415 MPTTIEREFE ELDTQ----- --------RR W--------- ---------- BACU017077/1-495 -MESCRRVPE ELPPERQDQQ EIVTGARRHR WGRSRHRRDV RLTLKAQDRL bmy_02423T0/1-451 MSAAIEREFD ELDAQ----- --------NR W--------- ---------- ENSBTAP00000013969/1-388 MSAAIEREFE ELDAQ----- --------NR W--------- ---------- 51 100 ENSTTRP00000011632/1-386 ---------- ---------- ---------- ---------- ---------- ENSP00000311857/1-415 ---------- ---------- ---------- ---------Q PLYL------ BACU017077/1-495 PRETRIPEAV VFVVDSSHRD RVSEAHNELA KLLTEKELRD ALLLIFANKQ bmy_02423T0/1-451 ---------- ---------- ---------- ---------Q QLYL------ ENSBTAP00000013969/1-388 ---------- ---------- ---------- ---------Q QLYL------ 101 150 ENSTTRP00000011632/1-386 EIRSESHDYP HRVAKFPENR NRNRYRDVSP YDHSRVKLQN AENDYINASL ENSP00000311857/1-415 EIRNESHDYP HRVAKFPENR NRNRYRDVSP YDHSRVKLQN AENDYINASL BACU017077/1-495 EIRSESHDYP HRVAKFPENR NRNRYRDVSP YDHSRVKLQN AENDYINASL bmy_02423T0/1-451 EIRSESHDYP HRVAKFPENR NRNRYRDVSP YDHSRVKLQN AENDYINASL ENSBTAP00000013969/1-388 EIRSESHDYP HRVAKFPENR NRNRYRDVSP YDHSRVKLQN AENDYINASL 151 200 ENSTTRP00000011632/1-386 VDIEEAQRSY ILTQ------ --------XX LPNTGCHFWL MVWQQKTKAV ENSP00000311857/1-415 VDIEEAQRSY ILTQ------ --------GP LPNTCCHFWL MVWQQKTKAV BACU017077/1-495 VDIEEAQRSY ILTQASG--- --------GP LPNTGCHFWL MVWQQKTKAV bmy_02423T0/1-451 VDIEEAQRSY ILTQASGVMC SRCLTAILGP LPNTGCHFWL MVWQQKTKAV ENSBTAP00000013969/1-388 VDIEEAQRSY ILTQ------ --------GP LPNTGCHFWL MVWQQKTKAV 201 250 ENSTTRP00000011632/1-386 VMLNRIVEKE SVKCAQYWPT KDDREMLFKE TGFSVKFLSE DVKSYYTVHL ENSP00000311857/1-415 VMLNRIVEKE SVKCAQYWPT -DDQEMLFKE TGFSVKLLSE DVKSYYTVHL BACU017077/1-495 VMLNRIVEKE SVKCAQYWPT KDDREMLFKE TGFSVKFLSE DVKSYYTVHV bmy_02423T0/1-451 VMLNRIVEKE SVKCAQYWPT KDDREMLFKE TGFSVKFLSE DVKSYYTVHL ENSBTAP00000013969/1-388 VMLNRIVEKD SVKCAQYWPT KDDREMLFKE TGFSVKFLSE DVKSYYTVHL 251 300 ENSTTRP00000011632/1-386 LQLGNTNSEA D--ISHFYTT I---FG-PES XXXXXXXXXX XXXXXXXXXX ENSP00000311857/1-415 LQLENINSGE TRTISHFHYT TWPDFGVPES PASFLNFLFK VRESGSLNPD BACU017077/1-495 LQLGNTNSGE TRTISHFHYT TWPDFGVPES PASFLNFLFK VRESGSLNPE bmy_02423T0/1-451 LQLGNTNSGE TRTISHFHYT TWPDFGVPES PASFLNFLFK VRESGSLNPE ENSBTAP00000013969/1-388 LQLGNTRTGE TRTISHFHYT TWPDFGVPES PASFLNFLFK VRESGSLNPE 301 350 ENSTTRP00000011632/1-386 XXXXXXXXXX XXXXXXXXXX XXXXXXXMEK GDNINIKQLL LNMRKYRMGL ENSP00000311857/1-415 HGPAVIHCSA GIGRSGTFSL VDTCLVLMEK GDDINIKQVL LNMRKYRMGL BACU017077/1-495 HGPAVIHCSA GIGRSGTFSL VDTCLVLMEK GDNINIKQLL LNMRKYRMGL bmy_02423T0/1-451 HGPAVIHCSA GIGRSGTFSL VDTCLVLMEK GDNINIKQLL LNMRKYRMGL ENSBTAP00000013969/1-388 HGPAVIHCSA GIGRSGTFSL VDSCLVLIEK GDNINIKQLL LNMRKYRMGL 351 400 ENSTTRP00000011632/1-386 IQTPDQLRFS YMTIIEGAKF IKGDSSIQKR WKELSKEDVC PVFDHSPTKI ENSP00000311857/1-415 IQTPDQLRFS YMAIIEGAKC IKGDSSIQKR WKELSKEDLS PAFDHSPNKI BACU017077/1-495 IQTPDQLRFS YMTIIEGAKF IKGDSSIQKR WKELSKEDVC PVFDHSPTKI bmy_02423T0/1-451 IQTPDQLRFS YMTIIEGAKF IKGDSSIQKR WKELSKEDVC PVFDHSPTKI ENSBTAP00000013969/1-388 IQTPDQLRFS YMTIIEGAKF IKGDSSIQKR WKELSKEDVC PVFDHSPTKI 401 450 ENSTTRP00000011632/1-386 MTEIYNGNRI GLEEEKLTSD RYTGLSSKMQ DTLEENSEXX XXXXXXXXXX ENSP00000311857/1-415 MTEKYNGNRI GLEEEKLTGD RCTGLSSKMQ DTMEENSESA LRKRIREDRK BACU017077/1-495 MTEKYNGNRI GLEEEKLTSD RYTGLSSKMQ DMLEENSESA LRKRLREDRK bmy_02423T0/1-451 MTEKYNGNRI GLEEEKLTSD RYTGLSSKMQ DTLEENSESA LRKRLREDRK ENSBTAP00000013969/1-388 MTEKYNGNRI GLEEEKLTGD RYSGLSSKTQ EAPEESSESA LRKRLREDRK 451 500 ENSTTRP00000011632/1-386 XXXXXXXXXX XXXXXXXXXX XXX------- -------XXX XXXXXXXXXX ENSP00000311857/1-415 ATTAQKVQQM KQRLNENERK RKR------- -------WLY WQPILTKMGF BACU017077/1-495 ASTAQKVQQM KKRLNETERK RKR------- -------WLY WQPILTKMGF bmy_02423T0/1-451 ASTAQKVQQM KQRLNETERK RKRHESYRDF YNTVYFHWFG FDSIFPCICL ENSBTAP00000013969/1-388 ASTAQKVQQM KQRLSETERK RKR------- ---------- --PRLTDT-- 501 550 ENSTTRP00000011632/1-386 XXXXXXXXXX XXXLFF-QNA L------- ENSP00000311857/1-415 MSVILVGAFV GWTLFFQQNA L------- BACU017077/1-495 VSVILVGAFV GWTLFFQQNA L------- bmy_02423T0/1-451 QSTVSGTAAP TAPTTADKLE MPGVLLFC ENSBTAP00000013969/1-388 ---------- ---------- --------