KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:59 2014 Check: 00 .. Name: bmy_20041T0/1-255 Len: 353 Check: 5355 Weight: 1.00 Name: ENSTTRP00000005044/1-350 Len: 353 Check: 9902 Weight: 1.00 Name: ENSP00000345083/1-347 Len: 353 Check: 6042 Weight: 1.00 Name: BACU005282/1-337 Len: 353 Check: 3821 Weight: 1.00 Name: ENSBTAP00000013983/1-347 Len: 353 Check: 6001 Weight: 1.00 // 1 50 bmy_20041T0/1-255 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005044/1-350 LPVPGTLMSG GRTLLLSLLG KSKRKKDLRI TCVSKPPAPS PTPPRNLDSR ENSP00000345083/1-347 MESPASSQPA S---MPQSKG KSKRKKDLRI SCMSKPPAPN PTPPRNLDSR BACU005282/1-337 MESPAASQPA G---VPASKG KSRRKKDLRI SCVSKPPAPS PTPPRNLDSR ENSBTAP00000013983/1-347 MESPAPSPPA G---VPTSKG KSRRKKDLRI SCMSKPPAPS PTLPRNLDSR 51 100 bmy_20041T0/1-255 ---------- ---------- ---------- ---------- --MAVKRIRA ENSTTRP00000005044/1-350 AFITIGDRNF EVEADDLVTI SELGRGAYGV VEKVRHAQSG TIMAVKRIRA ENSP00000345083/1-347 TFITIGDRNF EVEADDLVTI SELGRGAYGV VEKVRHAQSG TIMAVKRIRA BACU005282/1-337 AFITIGDRNF EVEADDLVAI SELGRGAYGV VEKVRHAQSG TIMAVKRIRA ENSBTAP00000013983/1-347 AFITIGDRNF EVEADDLVTI SELGRGAYGV VEKVRHAQSG TIMAVKRIRA 101 150 bmy_20041T0/1-255 TVNSQEQKRL LMDLDVNMRT VDCFYTVTFY GALFREGDGW PWVGCL---- ENSTTRP00000005044/1-350 TVNSQEQKRL LMDLDVNMRT VDCFYTVTFY GALFREGDVW I---CMELMD ENSP00000345083/1-347 TVNSQEQKRL LMDLDINMRT VDCFYTVTFY GALFREGDVW I---CMELMD BACU005282/1-337 TVNSQEQKRL LMDLDVNMRT VDCFYT---- ------GDVW I---CMELMD ENSBTAP00000013983/1-347 TVNSQEQKRL LMDLDVNMRT VDCFYTVTFY GALFREGDVW I---CMELMD 151 200 bmy_20041T0/1-255 AALSLLMQPG ITAIRSLPPS SCSK--CQIV RALEHLHSKL SVIHRDVKPS ENSTTRP00000005044/1-350 TSLDKFYRKV LDKDMTIPED ILGEIAVSIV RALEHLHSKL SVIHRDVKPS ENSP00000345083/1-347 TSLDKFYRKV LDKNMTIPED ILGEIAVSIV RALEHLHSKL SVIHRDVKPS BACU005282/1-337 TSLDKFYRKV LDKDMTIPED ILGEIAVSIV RALEHLHSKL SVIHRDVKPS ENSBTAP00000013983/1-347 TSLDKFYRKV LDKGMTIPED ILGEIAVSIV RALEHLHSKL SVIHRDVKPS 201 250 bmy_20041T0/1-255 NVLINKEGHV KMCDFGISGY LVDSVAKTMD AGCKPYMAPE RINPELNQKG ENSTTRP00000005044/1-350 NVFINKEGHV KMCDFGISGY MVDSVAKTMD AGCKPYMAPE RINPELNQKG ENSP00000345083/1-347 NVLINKEGHV KMCDFGISGY LVDSVAKTMD AGCKPYMAPE RINPELNQKG BACU005282/1-337 NVLINKEGHV KMCDFGISGY LVDSVAKTMD AGCKPYMAPE RINPELNQKG ENSBTAP00000013983/1-347 NVLINKEGHV KMCDFGISGY LVDSVAKTMD AGCKPYMAPE RINPELNQKG 251 300 bmy_20041T0/1-255 YNVKSDVWSL GITMIEMAIL RFPYESWGTP FQQLKQVVEE PSPQLPADRF ENSTTRP00000005044/1-350 YNVKSDVWSL GITMIEMAIL RFPYESWGTP FQQLKQVVEE PSPQLPADRF ENSP00000345083/1-347 YNVKSDVWSL GITMIEMAIL RFPYESWGTP FQQLKQVVEE PSPQLPADRF BACU005282/1-337 YNVKSDVWSL GITMIEMAIL RFPYESWGTP FQQLKQVVEE PSPQLPADRF ENSBTAP00000013983/1-347 YNVKSDVWSL GITMIEMAIL RFPYESWGTP FQQLKQVVEE PSPQLPADRF 301 350 bmy_20041T0/1-255 SPEFVDFTAQ CLRKNPAERM SYLELMEHPF FTSHKTKKTD IAAFVKEILG ENSTTRP00000005044/1-350 SPEFVDFTAQ CLRKNPAERM SYLELMEHPF FTSHKTKKTD IAAFVKEILG ENSP00000345083/1-347 SPEFVDFTAQ CLRKNPAERM SYLELMEHPF FTLHKTKKTD IAAFVKEILG BACU005282/1-337 SPEFVDFTAQ CLRKNPAERM SYLELMEHPF FTSHKTKKTD IAAFVKEILG ENSBTAP00000013983/1-347 SPEFVDFTAQ CLRKNPAERM SYLELMEHPF FTSHKTKKTD IAAFVKEILG 351 400 bmy_20041T0/1-255 EDS ENSTTRP00000005044/1-350 EDS ENSP00000345083/1-347 EDS BACU005282/1-337 EDS ENSBTAP00000013983/1-347 EDS