KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:59 2014 Check: 00 .. Name: ENSP00000261796/1-180 Len: 214 Check: 1190 Weight: 1.00 Name: bmy_11258T0/1-162 Len: 214 Check: 6929 Weight: 1.00 Name: BACU013122/1-214 Len: 214 Check: 461 Weight: 1.00 Name: ENSTTRP00000007971/1-180 Len: 214 Check: 120 Weight: 1.00 Name: ENSBTAP00000013986/1-180 Len: 214 Check: 319 Weight: 1.00 // 1 50 ENSP00000261796/1-180 ---------- ------MDWP HNL------- ---------- -LFLLTISIF bmy_11258T0/1-162 ---------- MTSRTVFPGI PILASKGFLG ----KLDRED KLFLLTISIF BACU013122/1-214 MTGEPGPARG LASSFPLPWA PSLSPEGDLA LPPLTCGLPP QLFLLTISIF ENSTTRP00000007971/1-180 ---------- ------MDWP HNL------- ---------- -LFLLTISIF ENSBTAP00000013986/1-180 ---------- ------MDWP HNL------- ---------- -LFLLTISIF 51 100 ENSP00000261796/1-180 LGLGQPRSPK SKRKGQGRPG PLAPGPHQVP LDLVSRMKPY ARMEEYERNI bmy_11258T0/1-162 LGLGQPRNPK GKRKGQGRPG TLAPGPHQVP LDLVSRAKPY ARMEEYERNL BACU013122/1-214 LGLGQPRNPK GKRKGQGRPG TLAPGPHQVP LDLVSRAKPY ARMEEYERNL ENSTTRP00000007971/1-180 LGLGQPRNPK GKRKGQGRPG TLAPGPHQVP LDLVSQAKPY ARMEEYERNL ENSBTAP00000013986/1-180 LGLGQPRNPK GKRKGPGRPG TLAPGPHQLP LDLVSRAKPY ARMEEYERNL 101 150 ENSP00000261796/1-180 EEMVAQLRNS SELAQRKCEV NLQLWMSNKR SLSPWGYSIN HDPSRIPVDL bmy_11258T0/1-162 GEMVAQLRNS SEPARRKCEV NLQLWLSNKR SLSPWGYSIN HDPSRIPADL BACU013122/1-214 GEMVAQLRNS SEPARRKCEV NLQLWLSNKR SLSPWGYSLH HDPSRFPADL ENSTTRP00000007971/1-180 GEMVAQLRNS SEPARRKCEV NLQLWLSNKR SLSPWGYSIN HDPSRIPADL ENSBTAP00000013986/1-180 AEMVAQLRNS SEPARRKCEV NLQLWLSNKR SLSPWGYSIN HDPSRVPADL 151 200 ENSP00000261796/1-180 PEARCLCLGC VNPFTMQEDR SMVSVPVFSQ VPVRRRLCPP PPRTGPCRQR bmy_11258T0/1-162 PEARCLCLGC VNPFTMQEDR SMVLVQ---- ---------- ---------- BACU013122/1-214 PEARCLCLGC VNPFTMQEDR SMVSVPVFSQ VPVRRRLCPL PPRTGPCRQR ENSTTRP00000007971/1-180 PEARCLCLGC VNPFTMQEDR SMVSVPVFSQ VPVRRRLCPL PPRTGPCRQR ENSBTAP00000013986/1-180 PEAQCLCLGC VNPFTMQEDR SMVSVPVFSQ VPVRRRLCPP PPRPGPCRQR 201 250 ENSP00000261796/1-180 AVMETIAVGC TCIF bmy_11258T0/1-162 ---------- ---- BACU013122/1-214 AVMETIAVGC TCIF ENSTTRP00000007971/1-180 AVMETIAVGC TCIF ENSBTAP00000013986/1-180 AVMETIAVGC TCIF