KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:00 2014 Check: 00 .. Name: ENSBTAP00000013988/1-430 Len: 430 Check: 6165 Weight: 1.00 Name: ENSP00000233710/1-430 Len: 430 Check: 8419 Weight: 1.00 Name: bmy_21096T0/1-392 Len: 430 Check: 6051 Weight: 1.00 Name: BACU012665/1-430 Len: 430 Check: 1966 Weight: 1.00 Name: ENSTTRP00000000858/1-430 Len: 430 Check: 1279 Weight: 1.00 // 1 50 ENSBTAP00000013988/1-430 MAKRLLRGTL RLWGGRAAPC LPPASRCSHS GGEERLETSS AKKLTDIGTR ENSP00000233710/1-430 MAARLLRGSL RVLGGHRAPR QLPAARCSHS GGEERLETPS AKKLTDIGIR bmy_21096T0/1-392 DFNLDVKSNN SL--NFLNVC IF--LRCSHS GGEERLEAPS AKKLTDIGIR BACU012665/1-430 MATRLLRGAL RLWGGRCAPS VPPASRCSHS GGEERLETPS AKKLTDIGIR ENSTTRP00000000858/1-430 MATRLLRRAL RLWGGRCAPS VPPASRCSHS GGEERLETPS AKKLTDIGIR 51 100 ENSBTAP00000013988/1-430 RIFSLEHDIF RESVRKFFQE EVIPYLSRWE KAGEVSRELW EKAGKQGLLG ENSP00000233710/1-430 RIFSPEHDIF RKSVRKFFQE EVIPHHSEWE KAGEVSREVW EKAGKQGLLG bmy_21096T0/1-392 RIFSSEHDIF RESVRKFFQE EVIPHHAEWE KAGEVSRELW EKAGKQGLLG BACU012665/1-430 RIFSSEHDIF RESVRKFFQE EVIPHHAEWE KAGEVSRELW EKAGKQGLLG ENSTTRP00000000858/1-430 RIFSSEHDIF RESVRKFFQE EVIPHHAEWE KAGEVSRELW EKAGKQGLLG 101 150 ENSBTAP00000013988/1-430 ISIADHHGGI GGDLYSSAIV WEEQAYSNCT GPGFGLHSDI VMPYITNYGS ENSP00000233710/1-430 VNIAEHLGGI GGDLYSAAIV WEEQAYSNCS GPGFSIHSGI VMSYITNHGS bmy_21096T0/1-392 VNIAERHGGI GGDLYSSAVV WEEQAYSNCT GPGFSLHSDI VMPYIANYGS BACU012665/1-430 VNIAERHGGI GGDLYSSAVV WEEQAYSNCT GPGFSLHSDI VMPYVANYGS ENSTTRP00000000858/1-430 VNIAERHGGI GGDLYSSAVV WEEQAYSNCT GPGFSLHSDI VMPYIANYGS 151 200 ENSBTAP00000013988/1-430 EEQIKRFIPE MVAGKCIGAI AMTEPGAGSD LQGIRTNAKK DGSDWILNGS ENSP00000233710/1-430 EEQIKHFIPQ MTAGKCIGAI AMTEPGAGSD LQGIKTNAKK DGSDWILNGS bmy_21096T0/1-392 EEQIKHFIPQ MTAGKCIGAI AMTEPGAGSD LQGVRTNAKK DGSDWILNGS BACU012665/1-430 EEQIKHFIPQ MTAGKCIGAI AMTEPGAGSD LQGVRTNAKK DGSDWILNGS ENSTTRP00000000858/1-430 EEQIKHFIPQ MTAGKCIGAI AMTEPGAGSD LQGVRTNARK DGSDWILNGS 201 250 ENSBTAP00000013988/1-430 KVFVTNGWLC DIVIIVAITN REAHSPAHGI SLFLVENGMK GFIKGRKLDK ENSP00000233710/1-430 KVFISNGSLS DVVIVVAVTN HEAPSPAHGI SLFLVENGMK GFIKGRKLHK bmy_21096T0/1-392 KVFITNGWLS DVVIVVAVTN RDARSPAHGI SLFLVENGMK GFVKGRKLHK BACU012665/1-430 KVFITNGWLS DVVIVVAVTN RDARSPAHGI SLFLVENGMK GFVKGRKLHK ENSTTRP00000000858/1-430 KVFITNGWLS DVVIVVAVTN RDARSPAHGI SLFLVENGMK GFVKGRKLHK 251 300 ENSBTAP00000013988/1-430 IGLKAQDTAE FFFEDVRLPA GALLGEENKG YYYLMQELPQ ERLLISEIAV ENSP00000233710/1-430 MGLKAQDTAE LFFEDIRLPA SALLGEENKG FYYIMKELPQ ERLLIADVAI bmy_21096T0/1-392 MGLKA----- ---------- ---------- ---------Q ERLLIAELAV BACU012665/1-430 MGLKAQDTAE LFFEDVRLPA SALLGEENKG FYYLMQELPQ ERLLIAELAV ENSTTRP00000000858/1-430 MGLKAQDTAE LFFEDVRLPA RALLGEENKG FYYLMQELPQ ERLLIAELGV 301 350 ENSBTAP00000013988/1-430 SASEFMFEET RDYVKQRKAF GKTVADLQTV KHKLAELKTS ICVTRAFVDS ENSP00000233710/1-430 SASEFMFEET RNYVKQRKAF GKTVAHLQTV QHKLAELKTH ICVTRAFVDN bmy_21096T0/1-392 SASEFMFEET RNYVKQRKAF GKTVAHIQTV QHKLAELKTH ICVTRAFVDS BACU012665/1-430 SASEFMFEET RNYVKQRKAF GKTVAHIQTV QHKLAELKTH ICVTRAFVDS ENSTTRP00000000858/1-430 SASEFMFEET RNYVKQRKAF GKTIAHIQTV QHKLAELKTH ICVTRAFVDS 351 400 ENSBTAP00000013988/1-430 CLQLHRVKRL DVATAAMAKY WASDLQNRVA YDCLQLHGGW GYMFECPIAK ENSP00000233710/1-430 CLQLHEAKRL DSATACMAKY WASELQNSVA YDCVQLHGGW GYMWEYPIAK bmy_21096T0/1-392 CLQLHETKRL DSATASMAKY WASELQNSVA YDCVQLHGGW GYMWEYPIAK BACU012665/1-430 CLQLHETKRL DSATASMAKY WASELQNSVA YDCVQLHGGW GYMWEYPIAK ENSTTRP00000000858/1-430 CLQLHETKRL DSATASMAKY WASDLQNSVA YDCVQLHGGW GYMWEYPIAK 401 450 ENSBTAP00000013988/1-430 AYVDARVQTI YGGTNEIMKE LIAREIIHDQ ENSP00000233710/1-430 AYVDARVQPI YGGTNEIMKE LIAREIVFDK bmy_21096T0/1-392 AYVDARVQPI YGGTNEIMKE LIAREIVSDK BACU012665/1-430 AYVDARVQPI YGGTNEIMKE LIAREIVSDK ENSTTRP00000000858/1-430 AYVDARVQPI YGGTNEIMKE LIAREIVSDK