KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:08 2014 Check: 00 .. Name: ENSP00000234392/1-290 Len: 291 Check: 4041 Weight: 1.00 Name: ENSBTAP00000014023/1-286 Len: 291 Check: 3778 Weight: 1.00 Name: BACU006028/1-172 Len: 291 Check: 2276 Weight: 1.00 Name: bmy_18391T0/1-212 Len: 291 Check: 8965 Weight: 1.00 Name: ENSTTRP00000011602/1-286 Len: 291 Check: 2110 Weight: 1.00 // 1 50 ENSP00000234392/1-290 MGDGGAERDR GPARRAESGG GGGRCGDRSG AGDLRADGGG HSPTEVAGTS ENSBTAP00000014023/1-286 MGDGGTERDR GPARRESQSG RG---GDGGG AEDSTADAGG RSPREIAGTS BACU006028/1-172 ---------- ---------- ---------- ---------- ---------- bmy_18391T0/1-212 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011602/1-286 MGDGGAECDR GTSRR-SRSG RG---GDRGG AEDSSADACG RSPKETAGTS 51 100 ENSP00000234392/1-290 ASSPAGSRES GADSDGQPGP GEADHCRRIL VRDAKGTIRE IVLPKGLDLD ENSBTAP00000014023/1-286 DSSPAGSRES GADRDGQPGL GEADHCRRIL VRDAKGTIRE IVLPKGLDLD BACU006028/1-172 ---------- ---------- ---------- ---------- ---------- bmy_18391T0/1-212 -MTPA----- ---------- ---------- --DAKGTIRE IVLPKGLDLD ENSTTRP00000011602/1-286 ASSPAGSRES GADSDGQPGL GEADHCRRIL VRDAKGTIRE IVLPKGLDLD 101 150 ENSP00000234392/1-290 RPKRTRTSFT AEQLYRLEME FQRCQYVVGR ERTELARQLN LSETQVKVWF ENSBTAP00000014023/1-286 RPKRTRTSFT AEQLYRLEME FQRCQYVVGR ERTELARQLN LSETQVKVWF BACU006028/1-172 ---------- --------ME FQRCQYVVGR ERTELARQLN LSETQVKVWF bmy_18391T0/1-212 RPKRSRTSFT AEQLYHLEME FQRCQYVVGH ERTELARQLN LSETQVKVWF ENSTTRP00000011602/1-286 RPKRSRTSFT AEQLYRLEME FQRCQYVVGR ERTELAHQLN LSETQVKVWF 151 200 ENSP00000234392/1-290 QNRRTKQKKD QSRDLEKRAS SSASEAFATS NILRLLEQGR LLSVPRAPSL ENSBTAP00000014023/1-286 QNRRTKQKKD QSRDLEKRAS SSASKAFATS NILRLLEHGR LLSVPRAPSL BACU006028/1-172 QNRRTKQKKD QSRDLEKRAS SSASKAFATP DILRLLEQGR LLSPSSAPSL bmy_18391T0/1-212 QNRRTKQKKD QSRDLEKRAS SSASKAFATP DILRLLEQGR LLSPPSAPSL ENSTTRP00000011602/1-286 QNRRTKQKKD QSRDLEKRAS SSASKAFATP DILRLLEQGR LLSPPSAPSL 201 250 ENSP00000234392/1-290 LALTPSLPGL PASHRGTSLG DPRNSSPRLN PLSSASASPP LPPPLPAVCF ENSBTAP00000014023/1-286 LALTPGPPGL PAGHRGTSLG DPRNSSPHLN PLT--SASPP LPPPPPALCF BACU006028/1-172 LTLTPGPPRL PATHRGASLG DPRTSSPHLT PLTSASASPP PPPPPPALCF bmy_18391T0/1-212 LTLTPGPPRL PASHRGASLG DPRNSSPHLT QLTSASASPP LPPPPPALCF ENSTTRP00000011602/1-286 LTLTPGPPRL PASHRGASLG DPRNSSPHLT PLTSASASPP LPRPPPALCF 251 300 ENSP00000234392/1-290 SSAPLLDLPA GYELGSSAFE PYSWLERKVG SASS-CKKAN T ENSBTAP00000014023/1-286 STAPLLDLPA GYELGSSAFE PYSRLDRRVG SPGGSSKKAS A BACU006028/1-172 CTAPLPDLPA AYELGSSAFE PYSRLDGRVG SPGS-GKKAS A bmy_18391T0/1-212 CTAPLPDLPA GYELGSSAFE PYSRLDGRVG SPGG-GKKAS A ENSTTRP00000011602/1-286 CTAPLLDLPA GYELGSSAFE PYSRLDGRVG SPGG-GKKAS A