KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:08 2014 Check: 00 .. Name: BACU012594/1-322 Len: 367 Check: 9968 Weight: 1.00 Name: ENSP00000404042/1-227 Len: 367 Check: 2737 Weight: 1.00 Name: ENSTTRP00000010013/1-168 Len: 367 Check: 9900 Weight: 1.00 Name: bmy_16672T0/1-261 Len: 367 Check: 5330 Weight: 1.00 Name: ENSBTAP00000014027/1-241 Len: 367 Check: 2507 Weight: 1.00 // 1 50 BACU012594/1-322 ---------- ---------- ---------M QKKPDKLLKS GTPKSLLEPH ENSP00000404042/1-227 ---------- ---------- ---------- ----MAGVGA GPLRAMGRQA ENSTTRP00000010013/1-168 ---------- ---------- ---------- ---------- ---------- bmy_16672T0/1-261 REGGTAHAYS AQGLAASFES WAQVRACALG GGRALAGVWA GRRRAMGLLA ENSBTAP00000014027/1-241 ---------- ---------- GAQVRACALG TGRALAGVWA GRRRAMGLPA 51 100 BACU012594/1-322 WLGISFPVGW TAAPSRQGLL SRVRASKGRT GRSSSRHRT- -----RLRLL ENSP00000404042/1-227 LLLLAL---- -CATGAQGLY FHIGETEKRC FIEEIPDETM VIGNYRTQMW ENSTTRP00000010013/1-168 ---------- ---------- ---------- ---------- --------MW bmy_16672T0/1-261 LLLIAL---- -CAAGVRGLY FHIGETEKRC FIEEIPDETM VIGNYRTQMW ENSBTAP00000014027/1-241 LLLLAL---- -CAASARGLY FHIGETEKRC FIEEIPDETM VIGNYRTQMW 101 150 BACU012594/1-322 HPRRTLTPTP ARPGSREVPV GPWAPTFPPC ADPESGRPGG PNLPDLGPAL ENSP00000404042/1-227 DKQKEVF--- -------LPS TPGLGMHVEV KDPD------ ------GKVV ENSTTRP00000010013/1-168 DKQKEIC--- -------VPS TPGLGMHVEV KDRE------ ------GKVV bmy_16672T0/1-261 DKQKEIF--- -------LPS TPGLGMHVEV KDPE------ ------GKVV ENSBTAP00000014027/1-241 DKQKEVF--- -------LPS TPGLGMHVEV KDPE------ ------GKVV 151 200 BACU012594/1-322 QPSRSGTQA- ---PAQARTL SRICKEGVSR RLLSTPPCRV YWERGVGARM ENSP00000404042/1-227 LSRQYGSEGR FTFTSHTPGD HQICLHSNST RMALF----- -----AGGKL ENSTTRP00000010013/1-168 LSRQYGSEGR FTFTSHTPGD HQICLHSNST RMALF----- -----AGGRL bmy_16672T0/1-261 LSRQYGSEGR FTFTSHTPGD HQICLHSNST RMALF----- -----AGGRL ENSBTAP00000014027/1-241 LSRQYGSEGR FTFTSHTPGD HQICLHSNST RMALF----- -----AGGRL 201 250 BACU012594/1-322 RTGCKPLVGR GPNQLRSQRA GGTTRVSCAC ALSPRLCILA WKTRAGRGRA ENSP00000404042/1-227 RVHLDIQVGE HANNYPE--- ---------I AAKDKLTELQ LRARQLLDQV ENSTTRP00000010013/1-168 RVHLDIQVGE HANNYPE--- ---------I AAKDKLTELQ LRARQLLDQV bmy_16672T0/1-261 RVHLDIQVGE HANNYPE--- ---------I AAKDKLTELQ LRARQLLDQV ENSBTAP00000014027/1-241 RVHLDIQVGE HTNNYPE--- ---------I AAKDKLTELQ LRARQLLDQV 251 300 BACU012594/1-322 DAGREAPRTR ILR--RVLLR RRRAGRRCAH AHWEEGRA-- --LAGVWAGR ENSP00000404042/1-227 EQIQKEQDYQ RYREERFRLT SESTNQRVLW --WSIAQTVI LILTGIWQMR ENSTTRP00000010013/1-168 EQIQKEQDYQ RYREERFRLI SESTNQRVVW --WSIAQTAI LILTGIWQMR bmy_16672T0/1-261 EQIQKEQDYQ RYREERFRLI SESTNQRVLW --WSIAQTVI LILTGIWQMR ENSBTAP00000014027/1-241 EQIQKEQDYQ RYREERFRLI SESTNQRVLW --WSIAQTVI LILTGIWQMR 301 350 BACU012594/1-322 RRAMGLLALL LIALCAAGVR GLYFHIGETE KRCFIEEIPD ETMVIGQAGR ENSP00000404042/1-227 HL-------- ---------- ---------- -KSFFEA--- KKLV------ ENSTTRP00000010013/1-168 HL-------- ---------- ---------- -KSFFEA--- KKLV------ bmy_16672T0/1-261 HL-------- ---------- ---------- -KSFFEA--- KKLV------ ENSBTAP00000014027/1-241 HL-------- ---------- ---------- -KSFFEA--- KKLV------ 351 400 BACU012594/1-322 GWTGPCVSSR RGRAPTS ENSP00000404042/1-227 ---------- ------- ENSTTRP00000010013/1-168 ---------- ------- bmy_16672T0/1-261 ---------- ------- ENSBTAP00000014027/1-241 ---------- -------