KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:11 2014 Check: 00 .. Name: ENSP00000308318/1-285 Len: 338 Check: 3375 Weight: 1.00 Name: ENSBTAP00000014032/1-284 Len: 338 Check: 4099 Weight: 1.00 Name: bmy_09230T0/1-338 Len: 338 Check: 4800 Weight: 1.00 Name: BACU005209/1-284 Len: 338 Check: 4263 Weight: 1.00 // 1 50 ENSP00000308318/1-285 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014032/1-284 ---------- ---------- ---------- ---------- ---------- bmy_09230T0/1-338 MRLPAKGADL SPGPRSCRRR RCPCHPGADA AAGWRLRTSG LMSCTRVLAC BACU005209/1-284 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000308318/1-285 ---MMAVDIE YRYNCMAPSL RQERFAFKIS PKPSKPLRPC IQLSSKNEAS ENSBTAP00000014032/1-284 ----MAVDIE CRYSCMAPSL RRERFAFQIA PKPSKPLRPC IQLSGKNEAS bmy_09230T0/1-338 SNPVMAVDIE CRYSCMAPSL RRERFAFQIS PKPSKPLRPC IQLSGKNEAS BACU005209/1-284 ----MAVDIE CRYSCMAPSL RRERFAFQIS PKPSKPLRPC IQLSSKNEAS 101 150 ENSP00000308318/1-285 GMVAPAVQEK KVKKRVSFAD NQGLALTMVK VFSEFDDPLD MPFNITELLD ENSBTAP00000014032/1-284 GTVAPTVQEK KVKKRVSFAD NQGLALTMVK VFSEFDDPLD IPLNITELLD bmy_09230T0/1-338 GTVAPTVQEK KVKKRVSFAD NQGLALTMVK VFSEFDDPLD IPLNITELLD BACU005209/1-284 GTVAPTVQEK KVKKRVSFAD NQGLALTMVK VFSEFDDPLD IPLNITELLD 151 200 ENSP00000308318/1-285 NIVSLTTAES ESFVLDFSQP SADYLDFRNR LQADHVCLEN CVLKDKAIAG ENSBTAP00000014032/1-284 SIVSLTTAES ESFVLDFSQP SADYLDFRNR LQTDHVCLEN CVLKDRSIAG bmy_09230T0/1-338 SIVSLTTAES ESFVLDFSQP SADYLDFRNR LRTDHVCLEN CVLKDRAIAG BACU005209/1-284 SIVSLTTAES ESFVLDFSQP SADYLDFRNR LRTDHVCLEN CVLKDRAIAG 201 250 ENSP00000308318/1-285 TVKVQNLAFE KTVKIRMTFD TWKSYTDFPC QYVKDTYAGS DRDTFSFDIS ENSBTAP00000014032/1-284 TVKVQNLAFE KTVKVRMTFD TWKSFTDFPC WYVKDTYAGS DKDTFSFDIS bmy_09230T0/1-338 TVKVQNLAFE KMVKVRMTFD TWKSFTDFPC WYVKDTYAGS DKDTFSFEIS BACU005209/1-284 TVKVQNLAFE KMVKVRMTFD TWKSFTDFPC WYVKDTYAGS DKDTFSFEIS 251 300 ENSP00000308318/1-285 LPEKIQSYER MEFAVYYECN GQTYWDSNRG KNYRIIRAEL KSTQGMTKPH ENSBTAP00000014032/1-284 LPEKIQSYER MEFAVCYECN GQTYWDSNKG KNYRIIRAEL QSTQGTAQPP bmy_09230T0/1-338 LPEKIQSYER MEFAVCYECN GQTYWDSNKG KNYRIIRAEL KSTQGTAQPP BACU005209/1-284 LPEKIQSYER MEFAVCYECN GQTYWDSNKG KNYRIIRAEL KSTQGTAQPP 301 350 ENSP00000308318/1-285 SGPDLGISFD QFGSPRCSYG LFPEWPSYLG YEKLGPYY ENSBTAP00000014032/1-284 NGPDFEIAFD QFGSPRCSYG LFPEWPSYLG YEKLGPYY bmy_09230T0/1-338 NGPDFGIAFD QFGSPRCSYG LFPEWPSYLG YEKLGPYY BACU005209/1-284 NGPDFGIAFD QFGSPRCSYG LFPEWPSYLG YEKLGPYY