KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:12 2014 Check: 00 .. Name: ENSP00000234396/1-513 Len: 943 Check: 9915 Weight: 1.00 Name: ENSBTAP00000014039/1-513 Len: 943 Check: 8145 Weight: 1.00 Name: BACU006027/1-943 Len: 943 Check: 1487 Weight: 1.00 Name: bmy_18392T0/1-463 Len: 943 Check: 5446 Weight: 1.00 Name: ENSTTRP00000011604/1-513 Len: 943 Check: 620 Weight: 1.00 // 1 50 ENSP00000234396/1-513 MAMEIDSRPG GLPGSSCNLG AAREHMQAVT RNYITHPRVT YRTVCSVNGP ENSBTAP00000014039/1-513 MAAEVDSRPR GLPGGGASLG AAREHVQAVT RNYITHPRIT YRTVCSVNGP BACU006027/1-943 MAAKVDSSPG GVPSSGSNLG ATREHMQAVT RNYITHPRVT YRTVCSVNGP bmy_18392T0/1-463 ---------- ---------- MARERL---- ---------- ---------P ENSTTRP00000011604/1-513 MAAKVDSSPG GVPSSGSNLG ATREHMQAVT RNYITHPRVT YRTVCSVNGP 51 100 ENSP00000234396/1-513 LVVLDRVKFA QYAEIVHFTL PDGTQRSGQV LEVAGTKAIV QVFEGTSGID ENSBTAP00000014039/1-513 LVVLDQVKFA QYAEIVNFTL PNGTQRSGQV LEVSGTKAIV QVFEGTSGID BACU006027/1-943 LVVLDQVKFA QYAEIVNFTL PNGTQRSGQV LEVAGTKAIV QVFEGTSGID bmy_18392T0/1-463 L-------FA QYAEIVNFTL PNGTQRSGQV LEVAGTKAIV QVFEGTSGID ENSTTRP00000011604/1-513 LVMLDQVKFA QYAEIVNFTL PNGTQRNGQV LEVAGTKAIV QVFEGTSGID 101 150 ENSP00000234396/1-513 ARKTTCEFTG DILRTPVSED MLGRVFNGSG KPIDKGPVVM AEDFLDINGQ ENSBTAP00000014039/1-513 AQKTTCEFTG DILRTPVSED MLGRVFNGSG KPIDKGPVVM AEDFLDINGQ BACU006027/1-943 AQKTTCEFTG DILRTPVSED MLGRVFNGSG KPIDKGPVVM AEDFLDINGQ bmy_18392T0/1-463 AQKTTCEFTG DILRTPVSED MLGRVFNGSG KPIDKGPVVM AEDFLDINGQ ENSTTRP00000011604/1-513 AQKTTCEFTG DILRTPVSED MLGRVFNGSG KPIDKGPVVM AEDFLDINGQ 151 200 ENSP00000234396/1-513 PINPHSRIYP EEMIQTGISP IDVMNSIARG QKIPIFSAAG LPHNEIAAQI ENSBTAP00000014039/1-513 PINPHDRIYP EEMIETGISP IDVMNSIARG QKIPIFSAAG LPHNEIAAQI BACU006027/1-943 PINPHDRIYP EEMIQTGISP IDVMNSIARG QKIPIFSAAG LPHNEIAAQI bmy_18392T0/1-463 PINPHDRIYP EEMIQTGISP IDVMNSIARG QKIPIFSAAG LPHNEIAAQI ENSTTRP00000011604/1-513 PINPHNRIYP EEMIQTGISP IDVMNSIARG QKIPIFSAAG LPHNEIAAQI 201 250 ENSP00000234396/1-513 CRQAGLVKKS KAVLDYHDDN FAIVFAAMGV NMETARFFKS DFEQNGTMGN ENSBTAP00000014039/1-513 CRQAGLVKKS KAVLDYHDDN FAIVFAAMGV NMETARFFKS DFEQNGTMGN BACU006027/1-943 CRQAGLVKKS KAVLDYHDDN FAIVFAAMGV NMETARFFKS DFEQNGTMGN bmy_18392T0/1-463 CRQAGLVKKS KAVLDYHDDN FAIVFAAMGV NMETARFFKS DFEQNGTMGN ENSTTRP00000011604/1-513 CRQAGLVKKS KAVLDYHDDN FAIVFAAMGV NMETARFFKS DFEQNGTMGN 251 300 ENSP00000234396/1-513 VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA ENSBTAP00000014039/1-513 VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA BACU006027/1-943 VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA bmy_18392T0/1-463 VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA ENSTTRP00000011604/1-513 VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA 301 350 ENSP00000234396/1-513 LREVSAAREE VPGRRGFPGY MYTDLATIYE RAGRVEGRGG SITQIPILTM ENSBTAP00000014039/1-513 LREVSAAREE VPGRRGFPGY MYTDLATIYE RAGRVEGRGG SITQIPILTM BACU006027/1-943 LREVSAAREE VPGRRGFPGY MYTDLATIYE RAGRVEGRGG SITQIPILTM bmy_18392T0/1-463 LREVSAAREE VPGRRGFPGY MYTDLATIYE RAGRVEGRGG SITQIPILTM ENSTTRP00000011604/1-513 LREVSAAREE VPGRRGFPGY MYTDLATIYE RAGRVEGRGG SITQVPILTM 351 400 ENSP00000234396/1-513 PNDDITHPIP DLTGFITEGQ IYVDRQLHNR QIYPPINVLP SLSRLMKSAI ENSBTAP00000014039/1-513 PNDDITHPIP DLTGFITEGQ IYVDRQLHNR QIYPPINVLP SLSRMMKSAI BACU006027/1-943 PNDDITHPIP DLTGFITEGQ IYVDRQLHNR QIYPPINVLP SLSRLMKSAI bmy_18392T0/1-463 PNDDITHPIP DLTGFITEGQ IYVDRQLHNR QIYPPINVLP SLSRLMKSAI ENSTTRP00000011604/1-513 PNDDITHPIP DLTGFITEGQ IYVDRQLHNR QIYPPINVLP SLSRLMKSAI 401 450 ENSP00000234396/1-513 GEGMTRKDHG DVSNQLYACY AIGKDVQAMK AVVGEEALTS EDLLYLEFLQ ENSBTAP00000014039/1-513 GEGMTRKDHG DVSNQLYACY AIGKDVQAMK AVVGEEALTS EDLLYLEFLQ BACU006027/1-943 GEGMTRKDHG DVSNQLYACY AVGKDVQAMK AVVGEEALTS EDLLYLEFLQ bmy_18392T0/1-463 GEGMTRKDHG DVSNQLYACY AVGKDVQAMK AVVGEEALAS EDLLYLEFLQ ENSTTRP00000011604/1-513 GEGMTRKDHG DVSNQLYACY AVGKDVQAMK AVVGEEALLS EDLLYLEFLQ 451 500 ENSP00000234396/1-513 KFEKNFINQG PYENRSVFES LDLGWKLLRI FPKEMLKRIP QAVIDEF--- ENSBTAP00000014039/1-513 KFEKKFINQG PYEKRSVFES LDLGWKLLRT FPKEMLKRIP QNIIDEF--- BACU006027/1-943 KFEKNFINQG PYEKRSVFES LDLGWKLLRI FPKEMLKRIP QNIIDDSVSL bmy_18392T0/1-463 KFEKNFINQG PYEKRSVFES LDLGWKLLRI FPKEMLKRIP QNIIDEF--- ENSTTRP00000011604/1-513 KFEKNFINQG PYEKRSVFES LDLGWKLLRI FPKEMLKRIP QNIIDEF--- 501 550 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 AEVWDQRAIG RYHELFAASL GNLEWLRFCL NRHRGEIPAD DKGFTAIHFA bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 AQSGRLACLQ VLVEEYKFPA DLPTNDGQTP LHLVMHSDNK TMALPCIHYL bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 IKQGAALNTQ TCNGSTPLHL AAREGLLSCV KVLVQKGANV HAQDARGCKP bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 IDYCKIWNHR ICARFLKDAM WQQDKKDFAH EMAKLKRLKK QLALTEEDCL bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000234396/1-513 --YSRE---- ---------- ---------- -----GAL-- ---------- ENSBTAP00000014039/1-513 --FSRE---- ---------- ---------- -----GAP-- ---------- BACU006027/1-943 TEYQKEQQIL READFKKWLH RKLLPQGQSL IRNTQGAPRP PPQATVLSKT bmy_18392T0/1-463 --YSRE---- ---------- ---------- -----GAP-- ---------- ENSTTRP00000011604/1-513 --YSRE---- ---------- ---------- -----GAP-- ---------- 751 800 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 PKHRAPGPPK SVYPSREARL RQTLQPSQPS VMPIPTCKQP MVRRPKVWNL bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000234396/1-513 ---------- ---------- ---QDLAPDT AL-------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---QDTEADT AL-------- ---------- BACU006027/1-943 SNNPVRSPTA QIGYPQGIRL GVHPDPRPEH DFRCFLEVRS DGHGGALLRT bmy_18392T0/1-463 ---------- ---------- ---PDPEPDT AL-------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---PDPEPDT AL-------- ---------- 851 900 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- ---------- BACU006027/1-943 VAGHQVAPVP RLPLEVIIRE LYPSVQPCRM KVPQGFCSVT MREVPRKRRL bmy_18392T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000234396/1-513 ---------- ---------- ---------- ---------- --- ENSBTAP00000014039/1-513 ---------- ---------- ---------- ---------- --- BACU006027/1-943 GDGAFWTDTL SMNLRETFDE GFLAAVRAHQ GLPALPSPKP PHT bmy_18392T0/1-463 ---------- ---------- ---------- ---------- --- ENSTTRP00000011604/1-513 ---------- ---------- ---------- ---------- ---