KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:15 2014 Check: 00 .. Name: ENSP00000353796/1-530 Len: 541 Check: 6393 Weight: 1.00 Name: ENSBTAP00000014047/1-449 Len: 541 Check: 3297 Weight: 1.00 Name: bmy_18393T0/1-446 Len: 541 Check: 2673 Weight: 1.00 Name: ENSTTRP00000011613/1-509 Len: 541 Check: 2132 Weight: 1.00 // 1 50 ENSP00000353796/1-530 MASAGSTARR AGSGSWHSER GEGRGARPQP TPSGSMQQAN KVSLKATWTD ENSBTAP00000014047/1-449 ---------- ---------- -PHSGSSS-- -----MSLAE ---------- bmy_18393T0/1-446 ---------- ---------- ---------- -----MSLAE ---------- ENSTTRP00000011613/1-509 ---------- ---------- -AAGGTPQAA RLSSPMQLAE KVSARC--GD 51 100 ENSP00000353796/1-530 AESKQPSQPL PDLADHLSAQ ATALARPRRP ASLTPPRADP SPSKESDQTA ENSBTAP00000014047/1-449 ---------- ---------- ---------- ---------- ---------E bmy_18393T0/1-446 ---------- ---------- ---------- ---------- ---------V ENSTTRP00000011613/1-509 SAARQPSAPW PGLQKGLRAR GPARAGPRRP ARLTPPRA-- -CSSSESRRV 101 150 ENSP00000353796/1-530 IDQTAIG-SY YQLFAAAVGN VEWLRFCLNQ SLREIPTDDK GFTAIHFAAQ ENSBTAP00000014047/1-449 WDQRAMGRSY YQLFAASLGN LEWLRFCLNR HRGEILADDK GFTAIHFAAQ bmy_18393T0/1-446 WDQRATG-SY HELFAASLGN LEWLRFCLNR HRGEIPADDK GFTAIHFAAQ ENSTTRP00000011613/1-509 WDQRAIG-SY HELFAASLGN LEWLRFCLNR HRGKIPADDK GFTAIHFAAQ 151 200 ENSP00000353796/1-530 WGKLACLQVL VEEYKFPVDL LTNNSQTPLH LVIHRDNTTV ALPCIYYLLE ENSBTAP00000014047/1-449 SGKLACLQVL VEEYKFPVNL PTNNGQTPLH LVIHGDNKTV ALACIHYLIK bmy_18393T0/1-446 NGRLACLQVL VEEYKFPADL PTNNGQTPLH LVIHSDNKTM ALPCIHYLIK ENSTTRP00000011613/1-509 SGKLACLRVL VEEYEFPADL PTNNGQTPLH LVIRRDNKTT ALPCIHYLIK 201 250 ENSP00000353796/1-530 KGADLNAQTC NGSTPLHLAA RDGLLDCVKV LVQSGANVHA QDAMGYKPID ENSBTAP00000014047/1-449 QGAALNTQTC NGSTPLHLAA REGLLSCVKV LVQKGANVHA QDATGCKPID bmy_18393T0/1-446 QGAALNTQTC NGSTPLHLAA REGLLSCVKV LVQKGANVHA QDARGCKPID ENSTTRP00000011613/1-509 QGAALNTQTC NGSTPLHLAA REGLLSCVKV LVQKGANVHA QDAMGCKPID 251 300 ENSP00000353796/1-530 FCKIWNHRAC ARFLKDAMWK KDKKDFAREM TKMKMFKSQL TLMEHNYLIE ENSBTAP00000014047/1-449 YCKIWNHRVC ARFLKDAMWK RDKEDFAHEM RKLKRLKDQL ALMEEDYLTE bmy_18393T0/1-446 YCKIWNHRIC ARFLKDAMWK QDKKDFAHEM GKLKRLKKQL ALMEEDYLTE ENSTTRP00000011613/1-509 YCKIWNHRIC ARFLKDAMWK QDKKDFAHEM GKLKRLKNQL ALMEEDYLTE 301 350 ENSP00000353796/1-530 YQKEHKILRE AAIRKWLHGK LHP-GHSLVS NTKQ-----A RATALSKTPE ENSBTAP00000014047/1-449 YQKEHQILRE ADFKKWLHHK LLLQDQSLIP SVQREPRAPP RATALSKTCK bmy_18393T0/1-446 YQKEQQILRD ADFKKWLHRK LLPQGQSLIR NTQGEPRPPP QATVLSKTPK ENSTTRP00000011613/1-509 YQKEHQILRE AAFKKWLQRK LPPQGPSPSR DTQGEPRPPP QATVLSKTPR 351 400 ENSP00000353796/1-530 QRESQRSRSF HPSVDARLQC I---PQPTEM PKPIYRKPTV KRPTMWNVSN ENSBTAP00000014047/1-449 DGVLWPPTSF HPSPEARLQQ IQQPNLPLVM SVPTYKPPTI RRPKVWNLSS bmy_18393T0/1-446 HRALWPPKSV YPSREARLRQ TLQPSQPSVM PIPTCKQPMV RRPKVWNLSN ENSTTRP00000011613/1-509 HGALRPPKSF YPSQEARLHC S---PQPSVM PIPTCKQLMV RRPKVWNLSN 401 450 ENSP00000353796/1-530 NPARPPTTQI SHSQGIRLGV HPDPTPEHDF SSFLEVRPDG HGGARLHTVD ENSBTAP00000014047/1-449 NPTRSPTAQI GYPQGVRLGV HPDPRPERDF RCFVEVRSDG HGGAHLRTVA bmy_18393T0/1-446 NPVRSPTAQI GYPQGIRLGA HPDPRLEHDF RCFLEVRSHG HGGALLRTVA ENSTTRP00000011613/1-509 SPVRSPAAQI GYPQGTRLGV HPDPRPEHDF RCFLEVRSDG HGGALLRTVA 451 500 ENSP00000353796/1-530 GHWVAPVPRL PFEVLLRMLY PRVWPYRMKV PQGFYPISMR EVPRKRHLGD ENSBTAP00000014047/1-449 GRQVAPVPRL PFEVVIRELH PSVRPYRMKV PQDFCSVAME DVPRKRHLGD bmy_18393T0/1-446 GNQVVPVPRL PLEVIIRELY PSVQPCRMKV PQGFCSVTMR EVPRKRRLGD ENSTTRP00000011613/1-509 GNQVAPVPRL PLEVIIRELY PSLQPCRMKV PQGFCSVTIR EVPRKRRLGD 501 550 ENSP00000353796/1-530 NTFWTDTLAM NLRDTFDEAF LAAVRSHQGL PTLPSPQTNP - ENSBTAP00000014047/1-449 SSFWTDTLSM NLRETFDEAF LAAVRAHQGL PALPSP---- - bmy_18393T0/1-446 GTFWTDTLSM NLRETFDEGF LAAVQAHQGL PTLPSPKPPH T ENSTTRP00000011613/1-509 GTFWTDTLSM NLRETFDEGF LAAVRAHQGL PTLPSQTTP- -