KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:16 2014 Check: 00 .. Name: bmy_14564T0/1-1160 Len: 1217 Check: 658 Weight: 1.00 Name: ENSTTRP00000005537/1-1214 Len: 1217 Check: 9594 Weight: 1.00 Name: ENSP00000305790/1-1217 Len: 1217 Check: 6916 Weight: 1.00 Name: ENSBTAP00000014050/1-1217 Len: 1217 Check: 6916 Weight: 1.00 Name: BACU018179/1-1169 Len: 1217 Check: 7227 Weight: 1.00 // 1 50 bmy_14564T0/1-1160 ---------- ---------- MKARTKQQEI VVSRGKILEL LRPDPNTGKV ENSTTRP00000005537/1-1214 MFLYNLTLQR ATGISFAIHG NFSGTKQQEI VVSRGKILEL LRPDPNTGKV ENSP00000305790/1-1217 MFLYNLTLQR ATGISFAIHG NFSGTKQQEI VVSRGKILEL LRPDPNTGKV ENSBTAP00000014050/1-1217 MFLYNLTLQR ATGISFAIHG NFSGTKQQEI VVSRGKILEL LRPDPNTGKV BACU018179/1-1169 MFLYNLTLQR ATGISFAIHG NFSGTKQQEI VVSRGKILEL LRPDPNTGKV 51 100 bmy_14564T0/1-1160 HTLLTVEVFG VIRSLMAFRL TGGTKDYIVV GSDSGRIVIL EYQPSKNMFE ENSTTRP00000005537/1-1214 HTLLTVEVFG VIRSLMAFRL TGGTKDYIVV GSDSGRIVIL EYQPSKNMFE ENSP00000305790/1-1217 HTLLTVEVFG VIRSLMAFRL TGGTKDYIVV GSDSGRIVIL EYQPSKNMFE ENSBTAP00000014050/1-1217 HTLLTVEVFG VIRSLMAFRL TGGTKDYIVV GSDSGRIVIL EYQPSKNMFE BACU018179/1-1169 HTLLTVEVFG VIRSLMAFRL TGGTKDYIVV GSDSGRIVIL EYQPSKNMFE 101 150 bmy_14564T0/1-1160 KIHQETFGKS GCRRIVPGQF LAVDPKGRAV MISAIEKQKL VYILNRDAAA ENSTTRP00000005537/1-1214 KIHQETFGKS GCRRIVPGQF LAVDPKGRAV MISAIEKQKL VYILNRDAAA ENSP00000305790/1-1217 KIHQETFGKS GCRRIVPGQF LAVDPKGRAV MISAIEKQKL VYILNRDAAA ENSBTAP00000014050/1-1217 KIHQETFGKS GCRRIVPGQF LAVDPKGRAV MISAIEKQKL VYILNRDAAA BACU018179/1-1169 KIHQETFGKS GCRRIVPGQF LAVDPKGRAV MISAIEKQKL VYILNRDAAA 151 200 bmy_14564T0/1-1160 RLTISSPLEA HKANTLVYHV VGVDVGFENP MFACLEMDYE EADNDPTGEA ENSTTRP00000005537/1-1214 RLTISSPLEA HKANTLVYHV VGVDVGFENP MFACLEMDYE EADNDPTGEA ENSP00000305790/1-1217 RLTISSPLEA HKANTLVYHV VGVDVGFENP MFACLEMDYE EADNDPTGEA ENSBTAP00000014050/1-1217 RLTISSPLEA HKANTLVYHV VGVDVGFENP MFACLEMDYE EADNDPTGEA BACU018179/1-1169 RLTISSPLEA HKANTLVYHV VGVDVGFENP MFACLEMDYE EADNDPTGEA 201 250 bmy_14564T0/1-1160 AANTQQTLTF YELDLGLNHV VRKYSEPLEE HGNFLITVPG GSDGPSGVLI ENSTTRP00000005537/1-1214 AANTQQTLTF YELDLGLNHV VRKYSEPLEE HGNFLITVPG GSDGPSGVLI ENSP00000305790/1-1217 AANTQQTLTF YELDLGLNHV VRKYSEPLEE HGNFLITVPG GSDGPSGVLI ENSBTAP00000014050/1-1217 AANTQQTLTF YELDLGLNHV VRKYSEPLEE HGNFLITVPG GSDGPSGVLI BACU018179/1-1169 AANTQQTLTF YELDLGLNHV VRKYSEPLEE HGNFLITVPG GSDGPSGVLI 251 300 bmy_14564T0/1-1160 CSENYITYKN FGDQPDIRCP IPRRRNDLDD PERGMIFVCS ATHKTKSMFF ENSTTRP00000005537/1-1214 CSENYITYKN FGDQPDIRCP IPRRRNDLDD PERGMIFVCS ATHKTKSMFF ENSP00000305790/1-1217 CSENYITYKN FGDQPDIRCP IPRRRNDLDD PERGMIFVCS ATHKTKSMFF ENSBTAP00000014050/1-1217 CSENYITYKN FGDQPDIRCP IPRRRNDLDD PERGMIFVCS ATHKTKSMFF BACU018179/1-1169 CSENYITYKN FGDQPDIRCP IPRRRNDLDD PERGMIFVCS ATHKTKSMFF 301 350 bmy_14564T0/1-1160 FLAQTEQGDI FKITLETDED MVTEIRLKYF DTVPVAAAMC VLKTGFLFVA ENSTTRP00000005537/1-1214 FLAQTEQGDI FKITLETDED MVTEIRLKYF DTVPVAAAMC VLKTGFLFVA ENSP00000305790/1-1217 FLAQTEQGDI FKITLETDED MVTEIRLKYF DTVPVAAAMC VLKTGFLFVA ENSBTAP00000014050/1-1217 FLAQTEQGDI FKITLETDED MVTEIRLKYF DTVPVAAAMC VLKTGFLFVA BACU018179/1-1169 FLAQTEQGDI FKITLETDED MVTEIRLKYF DTVPVAAAMC VLKTGFLFVA 351 400 bmy_14564T0/1-1160 SEFGNQFGYG ---------- ---------- ---------- ------KVAE ENSTTRP00000005537/1-1214 SEFGNHYLYQ IAHLGDDDEE PEFSSAMPLE EGDTFFFQPR PLKNLVLVDE ENSP00000305790/1-1217 SEFGNHYLYQ IAHLGDDDEE PEFSSAMPLE EGDTFFFQPR PLKNLVLVDE ENSBTAP00000014050/1-1217 SEFGNHYLYQ IAHLGDDDEE PEFSSAMPLE EGDTFFFQPR PLKNLVLVDE BACU018179/1-1169 SEFGNHYLYQ IAHLGDDDEE PEFSSAMPLE EGDTFFFQPR PLKNLVLVDE 401 450 bmy_14564T0/1-1160 VDIFSPFS-V QIADLANEDT PQLYVACGRG PRSSLRVLRH GLEVSEMAVS ENSTTRP00000005537/1-1214 LDSLSPILFC QIADLANEDT PQLYVACGMD PESSLRILSH GLEVSEMAVS ENSP00000305790/1-1217 LDSLSPILFC QIADLANEDT PQLYVACGRG PRSSLRVLRH GLEVSEMAVS ENSBTAP00000014050/1-1217 LDSLSPILFC QIADLANEDT PQLYVACGRG PRSSLRVLRH GLEVSEMAVS BACU018179/1-1169 LDSLSPILFC QIADLANEDT PQLYVACGRG PRSSLRVLRH GLEVSEMAVS 451 500 bmy_14564T0/1-1160 ELPGNPNAVW TVRRHIEDEF DAYIIVSFVN ATLVLSIGET VEEVTDSGFL ENSTTRP00000005537/1-1214 ELPGNPNAVW TVRRHIEDEF DAYIIVSFVN ATLVLSIGET VEEVTDSGFL ENSP00000305790/1-1217 ELPGNPNAVW TVRRHIEDEF DAYIIVSFVN ATLVLSIGET VEEVTDSGFL ENSBTAP00000014050/1-1217 ELPGNPNAVW TVRRHIEDEF DAYIIVSFVN ATLVLSIGET VEEVTDSGFL BACU018179/1-1169 ELPGNPNAVW TVRRHIEDEF DAYIIVSFVN ATLVLSIGET VEEVTDSGFL 501 550 bmy_14564T0/1-1160 GTTPTLSCSL LGDDALVQVY PDGIRHIRAD KRVNEWKTPG KKTIVKCAVN ENSTTRP00000005537/1-1214 GTTPTLSCSL LGDDALVQVY PDGIRHIRAD KRVNEWKTPG KKTIVKCAVN ENSP00000305790/1-1217 GTTPTLSCSL LGDDALVQVY PDGIRHIRAD KRVNEWKTPG KKTIVKCAVN ENSBTAP00000014050/1-1217 GTTPTLSCSL LGDDALVQVY PDGIRHIRAD KRVNEWKTPG KKTIVKCAVN BACU018179/1-1169 GTTPTLSCSL LGDDALVQVY PDGIRHIRAD KRVNEWKTPG KKTIVKCAVN 551 600 bmy_14564T0/1-1160 QRQVVIALTG GELVYFEMDP SGQLNEYTER KEMSADVVCM SLANVPPGEQ ENSTTRP00000005537/1-1214 QRQVVIALTG GELVYFEMDP SGQLNEYTER -EMSADVVCM SL-NVPPEKQ ENSP00000305790/1-1217 QRQVVIALTG GELVYFEMDP SGQLNEYTER KEMSADVVCM SLANVPPGEQ ENSBTAP00000014050/1-1217 QRQVVIALTG GELVYFEMDP SGQLNEYTER KEMSADVVCM SLANVPPGEQ BACU018179/1-1169 QRQVVIALTG GELVYFEMDP SGQLNEYTER KEMSADVVCM SLANVPPGEQ 601 650 bmy_14564T0/1-1160 RSRFLAVGLV DNTVRIISLD PSDCLQPLSM QALPAQPESL CIVEMGGTEK ENSTTRP00000005537/1-1214 RSRF-AVGLV DNTVRIISLD PSDCLQPLSM QALPAQPESL CIVEMGGTEK ENSP00000305790/1-1217 RSRFLAVGLV DNTVRIISLD PSDCLQPLSM QALPAQPESL CIVEMGGTEK ENSBTAP00000014050/1-1217 RSRFLAVGLV DNTVRIISLD PSDCLQPLSM QALPAQPESL CIVEMGGTEK BACU018179/1-1169 RSRFLAVGLV DNTVRIISLD PSDCLQPLSM QALPAQPESL CIVEMGGTEK 651 700 bmy_14564T0/1-1160 QDELGERGSI GFLYLNIGLQ NGVLLRTVLD PVTGDLSDTR TRYLGSRPVK ENSTTRP00000005537/1-1214 QDELGERGSI GFLYLNIGLQ NGVLLRTVLD PVTGDLSDTR TRYLGSRPVK ENSP00000305790/1-1217 QDELGERGSI GFLYLNIGLQ NGVLLRTVLD PVTGDLSDTR TRYLGSRPVK ENSBTAP00000014050/1-1217 QDELGERGSI GFLYLNIGLQ NGVLLRTVLD PVTGDLSDTR TRYLGSRPVK BACU018179/1-1169 QDELGERGSI GFLYLNIGLQ NGVLLRTVLD PVTGDLSDTR TRYLGSRPVK 701 750 bmy_14564T0/1-1160 LFRVRMQGQE AVLAMSSRSW LSYSYQSRFH LTPLSYETLE FASGFASEQC ENSTTRP00000005537/1-1214 LFRVRMQGQE AVLAMSSRSW LSYSYQSRFH LTPLSYETLE FASGFASEQC ENSP00000305790/1-1217 LFRVRMQGQE AVLAMSSRSW LSYSYQSRFH LTPLSYETLE FASGFASEQC ENSBTAP00000014050/1-1217 LFRVRMQGQE AVLAMSSRSW LSYSYQSRFH LTPLSYETLE FASGFASEQC BACU018179/1-1169 LFRVRMQGQE AVLAMSSRSW LSYSYQSRFH LTPLSYETLE FASGFASEQC 751 800 bmy_14564T0/1-1160 PEGIVAISTN TLRILALEKL GAVFNQVAFP LQYTPRKFVI HPESNNLIII ENSTTRP00000005537/1-1214 PEGIVAISTN TLRILALEKL GAVFNQVAFP LQYTPRKFVI HPESNNLIII ENSP00000305790/1-1217 PEGIVAISTN TLRILALEKL GAVFNQVAFP LQYTPRKFVI HPESNNLIII ENSBTAP00000014050/1-1217 PEGIVAISTN TLRILALEKL GAVFNQVAFP LQYTPRKFVI HPESNNLIII BACU018179/1-1169 PEGIVAISTN TLRILALEKL GAVFNQVAFP LQYTPRKFVI HPESNNLIII 801 850 bmy_14564T0/1-1160 ETDHNAYTEA TKAQRKQQMA EEMVEAAGED ERELAAEMAA AFLNENLPES ENSTTRP00000005537/1-1214 ETDHNAYTEA TKAQRKQQMA EEMVEAAGED ERELAAEMAA AFLNENLPES ENSP00000305790/1-1217 ETDHNAYTEA TKAQRKQQMA EEMVEAAGED ERELAAEMAA AFLNENLPES ENSBTAP00000014050/1-1217 ETDHNAYTEA TKAQRKQQMA EEMVEAAGED ERELAAEMAA AFLNENLPES BACU018179/1-1169 ETDHNAYTEA TKAQRKQQMA EEMVEAAGED ERELAAEMAA AFLNENLPES 851 900 bmy_14564T0/1-1160 IFGAPKAGNG QWASVIRVMN PIQGNTLDLV QLEQNEAAFS VAVCRFSNTG ENSTTRP00000005537/1-1214 IFGAPKAGNG QWASVIRVMN PIQGNTLDLV QLEQNEAAFS VAVCRFSNTG ENSP00000305790/1-1217 IFGAPKAGNG QWASVIRVMN PIQGNTLDLV QLEQNEAAFS VAVCRFSNTG ENSBTAP00000014050/1-1217 IFGAPKAGNG QWASVIRVMN PIQGNTLDLV QLEQNEAAFS VAVCRFSNTG BACU018179/1-1169 IFGAPKAGNG QWASVIRVMN PIQGNTLDLV QLEQNEAAFS VAVCRFSNTG 901 950 bmy_14564T0/1-1160 DDWYVLVGVA KDLILNPRSV AGGFVYTYKL VNNGEKLEFL HKTPVEEVPA ENSTTRP00000005537/1-1214 DDWYVLVGVA KDLILNPRSV AGGFVYTYKL VNNGEKLEFL HKTPVEEVPA ENSP00000305790/1-1217 EDWYVLVGVA KDLILNPRSV AGGFVYTYKL VNNGEKLEFL HKTPVEEVPA ENSBTAP00000014050/1-1217 EDWYVLVGVA KDLILNPRSV AGGFVYTYKL VNNGEKLEFL HKTPVEEVPA BACU018179/1-1169 DDWYVLVGVA KDLILNPRSV AGGFVYTYKL VNNGEKLEFL HKTPVEEVPA 951 1000 bmy_14564T0/1-1160 AIAPFQGRVL IGVGKLLRVY DLGKKKLLRK CENKHIANYI SGIQTIGHRV ENSTTRP00000005537/1-1214 AIAPFQGRVL IGVGKLLRVY DLGKKKLLRK CENKHIANYI SGIQTIGHRV ENSP00000305790/1-1217 AIAPFQGRVL IGVGKLLRVY DLGKKKLLRK CENKHIANYI SGIQTIGHRV ENSBTAP00000014050/1-1217 AIAPFQGRVL IGVGKLLRVY DLGKKKLLRK CENKHIANYI SGIQTIGHRV BACU018179/1-1169 AIAPFQGRVL IGVGKLLRVY DLGKKKLLRK CENKHIANYI SGIQTIGHRV 1001 1050 bmy_14564T0/1-1160 IVSDVQESFI WVRYKRNENQ LIIFADDTYP RWVTTASLLD YDTVAGADKF ENSTTRP00000005537/1-1214 IVSDVQESFI WVRYKRNENQ LIIFADDTYP RWVTTASLLD YDTVAGADKF ENSP00000305790/1-1217 IVSDVQESFI WVRYKRNENQ LIIFADDTYP RWVTTASLLD YDTVAGADKF ENSBTAP00000014050/1-1217 IVSDVQESFI WVRYKRNENQ LIIFADDTYP RWVTTASLLD YDTVAGADKF BACU018179/1-1169 IVSDVQESFI WVRYKRNENQ LIIFADDTYP RWVTTASLLD YDTVAGADKF 1051 1100 bmy_14564T0/1-1160 GNICVVRLPP NTNDEVDEDP TGNKALWDRG LLNGASQKAE VIMNYHVGET ENSTTRP00000005537/1-1214 GNICVVRLPP NTNDEVDEDP TGNKALWDRG LLNGASQKAE VIMNYHVGET ENSP00000305790/1-1217 GNICVVRLPP NTNDEVDEDP TGNKALWDRG LLNGASQKAE VIMNYHVGET ENSBTAP00000014050/1-1217 GNICVVRLPP NTNDEVDEDP TGNKALWDRG LLNGASQKAE VIMNYHVGET BACU018179/1-1169 GNICVVRLPP NTNDEVDEDP TGNKALWDRG LLNGASQK-- ---------- 1101 1150 bmy_14564T0/1-1160 VLSLQKTTLI PGGSESLVYT TLSGGIGILV PFTSHEDHDF FQHVEMHLRS ENSTTRP00000005537/1-1214 VLSLQKTTLI PGGSESLVYT TLSGGIGILV PFTSHEDHDF FQHVEMHLRS ENSP00000305790/1-1217 VLSLQKTTLI PGGSESLVYT TLSGGIGILV PFTSHEDHDF FQHVEMHLRS ENSBTAP00000014050/1-1217 VLSLQKTTLI PGGSESLVYT TLSGGIGILV PFTSHEDHDF FQHVEMHLRS BACU018179/1-1169 ---------- ---------- ---------- ------DHDF FQHVEMHLRS 1151 1200 bmy_14564T0/1-1160 EHPPLCGRDH LSFRSYYFPV KNVIDGDLCE QFNSMEPNKQ KNVSEELDRT ENSTTRP00000005537/1-1214 EHPPLCGRDH LSFRSYYFPV KNVIDGDLCE QFNSMEPNKQ KNVSEELDRT ENSP00000305790/1-1217 EHPPLCGRDH LSFRSYYFPV KNVIDGDLCE QFNSMEPNKQ KNVSEELDRT ENSBTAP00000014050/1-1217 EHPPLCGRDH LSFRSYYFPV KNVIDGDLCE QFNSMEPNKQ KNVSEELDRT BACU018179/1-1169 EHPPLCGRDH LSFRSYYFPV KNVIDGDLCE QFNSMEPNKQ KNVSEELDRT 1201 1250 bmy_14564T0/1-1160 PPEVSKKLED IRTRYAF ENSTTRP00000005537/1-1214 PPEVSKKLED IRTRYAF ENSP00000305790/1-1217 PPEVSKKLED IRTRYAF ENSBTAP00000014050/1-1217 PPEVSKKLED IRTRYAF BACU018179/1-1169 PPEVSKKLED IRTRYAF