KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:17 2014 Check: 00 .. Name: ENSTTRP00000012317/1-414 Len: 464 Check: 9483 Weight: 1.00 Name: ENSP00000381937/1-414 Len: 464 Check: 3709 Weight: 1.00 Name: ENSBTAP00000014052/1-464 Len: 464 Check: 7184 Weight: 1.00 Name: bmy_09266T0/1-424 Len: 464 Check: 2492 Weight: 1.00 Name: BACU020026/1-414 Len: 464 Check: 1038 Weight: 1.00 // 1 50 ENSTTRP00000012317/1-414 MGVSKLDILY RRLLLTKLFI RGWGRPEDLK RLFEFRKIIG NRERCQNLVS ENSP00000381937/1-414 MGVSKLDILY RRLLLTKLFI RGWGRPEDLK RLFEFRKMIG NRERCQNLVS ENSBTAP00000014052/1-464 MGVSKLDILY RRLLLTKLFI RGWGRPEDLK RLFEFRKIIG NRERCQNLVS bmy_09266T0/1-424 MGVSKLDILY RRLLLTKLFI RGWGRPEDLK RLFAFRKIIG NRERCQNLVS BACU020026/1-414 MGVSKLDILY RRLLLTKLFI RGWGRPEDLK RLFAFRKIIG NRERCQNLVS 51 100 ENSTTRP00000012317/1-414 SDYPIYIDKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXFQFIVPK ENSP00000381937/1-414 SDYPVHIDKI EEQSDCKILD GHFVSPMAHY VPDIMPIESV IARFQFIVPK ENSBTAP00000014052/1-464 SDYPVYIDKI EEQSDCKILD GHFVSPMAHY VPDIMPVESV IARFQFIVPK bmy_09266T0/1-424 SDYPIYIDKI EEQSDCKILD GHFVSPMAHY VPDIMPIESV IARFQFIVPK BACU020026/1-414 SDYPIYIDKI EEQSDCKILD GHFVSPMAHY VPDIMPIESV IARFQFIVPK 101 150 ENSTTRP00000012317/1-414 EWNSKYRPVC IHLAGTGDHH YWRRRTLMAR PMIKEARMAS LLLENPYYGC ENSP00000381937/1-414 EWNSKYRPVC IHLAGTGDHH YWRRRTLMAR PMIKEARMAS LLLENPYYGC ENSBTAP00000014052/1-464 EWNSKYRPVC IHLAGTGDHH YWRRRTLMAR PMIKEARMAS LLLENPYYGC bmy_09266T0/1-424 EWNSKYRPVC IHLAGTGDH- ---------- -----AR--- ---------- BACU020026/1-414 EWNSKYRPVC IHLAGTGDHH YWRRRTLMAR PMIKEARMAS LLLENPYYIL 151 200 ENSTTRP00000012317/1-414 RKPKDQXXSS LKNVSDLFVM GGALVLESAA LLHWLEREGY GPLGMTGISM ENSP00000381937/1-414 RKPKDQVRSS LKNVSDLFVM GGALVLESAA LLHWLEREGY GPLGMTGISM ENSBTAP00000014052/1-464 RKPKDQIRSS LKNVSDLFVM GGALVLESAA LLHWLEREGY GPLGMTGISM bmy_09266T0/1-424 -------RSS LKNVSDLFVM GGALVLESAA LLHWLEREGY GPLGMTGISM BACU020026/1-414 LKPKDQIRSS LKNVSDLFVM GGALVLESAA LLHWLEREGY GPLGMTGISM 201 250 ENSTTRP00000012317/1-414 GGHMASLAVS SWPKPMPLIP CLSWSTASG- ---------- ---------- ENSP00000381937/1-414 GGHMASLAVS NWPKPMPLIP CLSWSTASG- ---------- ---------- ENSBTAP00000014052/1-464 GGHMASLAVS NWPKPMPLIP CLSWSTASGV FTTGVLSKSI NWRELEKQYY bmy_09266T0/1-424 GGHMASLAVS NWPKPMPLIP CLSWSTASG- ---GVLSKSI NWRELEKQYY BACU020026/1-414 GGHMASLAVS NWPKPMPLIP CLSWSTASG- ---------- ---------- 251 300 ENSTTRP00000012317/1-414 ---------- ---VFTTTDS FKMGQEFLKH FPSSADKLTN LNLVSRTLNL ENSP00000381937/1-414 ---------- ---VFTTTDS FKMGQEFVKH FTSSADKLTN LNLVSRTLNL ENSBTAP00000014052/1-464 TQTVYEEEII HMLEYCGTDS FKMGQEFVKR FPSSADKLTN LNLVSRTLNL bmy_09266T0/1-424 TQTVYEEEII HMLEYCGTDS FKMGQEFLKH FPSSADKLTN LNLVSRTLNL BACU020026/1-414 ---------- ---VFTTTDS FKMGQEFLKH FPSSADKLTN LNLVSRTLNL 301 350 ENSTTRP00000012317/1-414 DMADQVVSQK AAECHKSSKT SISATSEGLL LQDTSRMGCF NQTLSTNKSS ENSP00000381937/1-414 DISNQVVSQK PADCHNSSKT SVSATSEGLL LQDTSKMKRF NQTLSTNKSG ENSBTAP00000014052/1-464 DMTDQVVSQK PVECHKSSKT SISATSEGLL LQDTSKMDCF NHTLSTNKSS bmy_09266T0/1-424 DMVDEVVSQK AAECHKSSKT SISATSEGLL LQDTSRMGCF NQTLSTNKSS BACU020026/1-414 DMVDEVVSQK AAECHKSSKT SVSATSEGLL LQDTSRMGCF NQTLSTNKSS 351 400 ENSTTRP00000012317/1-414 YTRCNPQSYH LLSKEQRRNT LQKEPLIFMK GVMDECTHVA NFSVPVDPSL ENSP00000381937/1-414 YTSRNPQSYH LLSKEQSRNS LRKESLIFMK GVMDECTHVA NFSVPVDPSL ENSBTAP00000014052/1-464 YTSCSPQSCH LLSKEQRRNN LQKESLIFMK GVMDECTHVA NFSVPVDPSL bmy_09266T0/1-424 YTRCNPQSYH LLSKEQRRNT LQKESLIFMK GVMDECTHVA NFSVPVDPSL BACU020026/1-414 YTRCNPQSYH LLSKEQRRNT LQKESLIFMK GVMDECTHVA NFSVPVDPSL 401 450 ENSTTRP00000012317/1-414 IIVVQAKEDA YIPRTGVRSL QEIWPGCEIR YLEGGHISAY LFKQGLFR-- ENSP00000381937/1-414 IIVVQAKEDA YIPRTGVRSL QEIWPGCEIR YLEGGHISAY LFKQGLFR-- ENSBTAP00000014052/1-464 IIVVQAKEDA YIPRTGVRSL QEIWPGCEIR YLEGGHISAY LFKQGLFRRA bmy_09266T0/1-424 IIVVQAKEDA YIPRTGVRSL QEIWPGCEIR YLEGGHISAY LFKQGLFRRA BACU020026/1-414 IIVVQAKEDA YIPRTGVRSL QEIWPGCEIR YLEGGHISAY LFKQGLFR-- 451 500 ENSTTRP00000012317/1-414 ---------- ---- ENSP00000381937/1-414 ---------- ---- ENSBTAP00000014052/1-464 IYDAFERFLH KYAN bmy_09266T0/1-424 IYDAFERFLR KYAN BACU020026/1-414 ---------- ----