KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:17 2014 Check: 00 .. Name: ENSTTRP00000012421/1-408 Len: 480 Check: 212 Weight: 1.00 Name: bmy_03879T0/1-475 Len: 480 Check: 3888 Weight: 1.00 Name: BACU008157/1-403 Len: 480 Check: 2508 Weight: 1.00 Name: ENSP00000408910/1-406 Len: 480 Check: 4545 Weight: 1.00 Name: ENSBTAP00000014053/1-403 Len: 480 Check: 9529 Weight: 1.00 // 1 50 ENSTTRP00000012421/1-408 ---------- ---------- ---------- ---------- ---------- bmy_03879T0/1-475 CHSRGVVAGC SRDFCFTLLL YYSCRETSYS SASSAAPFAA ALFWTRTQPL BACU008157/1-403 ---------- ---------- ---------- ---------- ---------- ENSP00000408910/1-406 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014053/1-403 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012421/1-408 ---------- ---------- --MADPKYAD LPGIARNEPD VYETSDLPED bmy_03879T0/1-475 PYPNTGPGSA EAPVPQPRLA AAMADPKYAD LPGIARNEPD VYETSDLPED BACU008157/1-403 ---------- ---------- --MADPKYAD LPGIARNEPD VYETSDLPED ENSP00000408910/1-406 ---------- ---------- --MADPKYAD LPGIARNEPD VYETSDLPED ENSBTAP00000014053/1-403 ---------- ---------- --MADPKYAD LPGIARNEPD VYETSDLPED 101 150 ENSTTRP00000012421/1-408 DQAEFDAXXX XXEELTSTSV EHIIVNPNAA YDKFKDKRVG TKGLDFSDRI bmy_03879T0/1-475 DQAEFDA--- --EELTSTSV EHIIVNPNAA YDKFKDKRVG TKGLDFSDRI BACU008157/1-403 DQAEFDA--- --EELTSTSV EHIIVNPNAA YDKFKDKRVG TKGLDFSDRI ENSP00000408910/1-406 DQAEFDAFAQ ELEELTSTSV EHIIVNPNAA YDKFKDKRVG TKGLDFSDRI ENSBTAP00000014053/1-403 DQAEFDA--- --EELTSTSV EHIIVNPNAA YDKFKDKRVG TKGLDFSDRI 151 200 ENSTTRP00000012421/1-408 GKTKRTGYES GEYEMLGEGL GVKETPQQKY QRLLHEVQEL TTEVEKIKTT bmy_03879T0/1-475 GKTKRTGYES GEYEMLGEGL GVKETPQQKY QRLLHEVQEL TTEVEKIKTT BACU008157/1-403 GKTKRTGYES GEYEMLGEGL GVKETPQQKY QRLLHEVQEL TTEVEKIKTT ENSP00000408910/1-406 GKTKRTGYES GEYEMLGEGL GVKETPQQKY QRLLHEVQEL TTEVEKIKTT ENSBTAP00000014053/1-403 GKTKRTGYES GEYEMLGEGL GVKETPQQKY QRLLHEVQEL TTEVEKIKTT 201 250 ENSTTRP00000012421/1-408 VKESATEEKL TPVVLAKQLA ALKQQLVASH LEKLLGPDAA INLTDPDGAL bmy_03879T0/1-475 VKESATEEKL TPVVLAKQLA ALKQQLVASH LEKLLGPDAA INLTDPDGAL BACU008157/1-403 VKESATEEKL TPVVLAKQLA ALKQQLVASH LEKLLGPDAA INLTDPDGAL ENSP00000408910/1-406 VKESATEEKL TPVLLAKQLA ALKQQLVASH LEKLLGPDAA INLTDPDGAL ENSBTAP00000014053/1-403 VKESATEEKL TPVVLAKQLA ALKQQLVASH LEKLLGPDAA INLTDPDGAL 251 300 ENSTTRP00000012421/1-408 AKRLLLQLEA TKNSKGTGSG GKTTSGTPPD SSLVTYELHS RPEQDKFSQA bmy_03879T0/1-475 AKRLLLQLEA TKNSKGTGSG GKTTSGTPPD SSLVTYELHS RPEQDKFSQA BACU008157/1-403 AKRLLLQLEA TKNSKGTGSG GKTTSGTPPD SSLVTYELHS RPEQDKFSQA ENSP00000408910/1-406 AKRLLLQLEA TKNSKG-GSG GKTT-GTPPD SSLVTYELHS RPEQDKFSQA ENSBTAP00000014053/1-403 AKRLLLQLEA TKNSKGTGSG GKTTSGTPPD SSLVTYELHS RPEQDKFSQA 301 350 ENSTTRP00000012421/1-408 AKVAELEKRL AELEAAVRCD QDAQNPLSAG LQGACLMETV ELLQAKVSAL bmy_03879T0/1-475 AKVAELEKRL AELEAAVRCD QDAQNPLSAG LQGACLMETV ELLQAKVSAL BACU008157/1-403 AKVAELEKRL AELEAAVRCD QDAQNPLSAG LQGACLMETV ELLQAKVSAL ENSP00000408910/1-406 AKVAELEKRL TELETAVRCD QDAQNPLSAG LQGACLMETV ELLQAKVSAL ENSBTAP00000014053/1-403 AKVAELEKRL TELEATVRCD QDAQNPLSAG LQGACLMDTV ELLQAKVGAL 351 400 ENSTTRP00000012421/1-408 DLAVLDQVEA RLQSVLGKVN EIAKHKASVE DADAQSKVHQ LYETIQRWSP bmy_03879T0/1-475 DLAVLDQVEA RLQSVLGKVN EIAKHKASVE DADAQSKVHQ LYETIQRWSP BACU008157/1-403 DLAVLDQVEA RLQSVLGKVN EIAKHKASVE DADAQSKVHQ LYETIQRWSP ENSP00000408910/1-406 DLAVLDQVEA RLQSVLGKVN EIAKHKASVE DADTQSKVHQ LYETIQRWSP ENSBTAP00000014053/1-403 DLAVLDQVEA RLQSVLGKVN EIAKHKASVE DADTQSKVHQ LYETIQRWSP 401 450 ENSTTRP00000012421/1-408 LASTLPELVQ RLVTIRQLHE QAVQFGQLMT HLDTTQQMIA CSLKDSATLL bmy_03879T0/1-475 LASTLPELVQ RLVTIRQLHE QAVQFGQLLT HLDTTQQMIA CSLKDSATLL BACU008157/1-403 LASTLPELVQ RLVTIRQLHE QAVQFGQLLT HLDTTQQMIA CSLKDSATLL ENSP00000408910/1-406 IASTLPELVQ RLVTIKQLHE QAMQFGQLLT HLDTTQQMIA NSLKDNTTLL ENSBTAP00000014053/1-403 IAASLPELVQ RLVTIKQLHE QAMQFGQLLT HLDTTQQMIA CSLKDNATLL 451 500 ENSTTRP00000012421/1-408 TQVQTTMRDN LSTVERNFAN IDERMKKLGK bmy_03879T0/1-475 TQVQTTMREN LSTVERNFAN IDERMKKLGK BACU008157/1-403 TQVQTTMREN LSTVERNFAN IDERMKKLGK ENSP00000408910/1-406 TQVQTTMREN LATVEGNFAS IDERMKKLGK ENSBTAP00000014053/1-403 TQVQTTMCEN LSTIEGNFAN IDERMKKLGK