KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:18 2014 Check: 00 .. Name: ENSTTRP00000014144/1-360 Len: 464 Check: 4028 Weight: 1.00 Name: ENSP00000313172/1-360 Len: 464 Check: 7168 Weight: 1.00 Name: ENSBTAP00000014056/1-360 Len: 464 Check: 8858 Weight: 1.00 Name: bmy_13674T0/1-259 Len: 464 Check: 710 Weight: 1.00 Name: BACU014174/1-388 Len: 464 Check: 1694 Weight: 1.00 // 1 50 ENSTTRP00000014144/1-360 MNYTKSSPLA ESTAIGFTPE LETILPVPSN ETTCENWKEI HHLVFHVANI ENSP00000313172/1-360 MNYTESSPLR ESTAIGFTPE LESIIPVPSN KTTCENWREI HHLVFHVANI ENSBTAP00000014056/1-360 MNYTESSPLA EATAIGFTPE LERILPVPSN ETTCENWREI HHLVFHVANI bmy_13674T0/1-259 ---------- ---------- ---------- ------MR-- ---------- BACU014174/1-388 ---------- ---------- ---------- ------MR-- ---------- 51 100 ENSTTRP00000014144/1-360 FFAIGLVIPT TLHLHMILLR GMLTIGCTLY IVWATLYRCA LDIMIWNSVF ENSP00000313172/1-360 CFAVGLVIPT TLHLHMIFLR GMLTLGCTLY IVWATLYRCA LDIMIWNSVF ENSBTAP00000014056/1-360 FFAIGLVIPT TLHLHMILLR GLLAVGCALY VVWATLYRCA LDIMIWNSVF bmy_13674T0/1-259 ---------- ---------- -----GCTLY IVWATLYRCA LDIMIWNSVF BACU014174/1-388 ---------- ---------- -----GCTLY IVWATLYRCA LDIMIWNSVF 101 150 ENSTTRP00000014144/1-360 LGINILHLSY LLYKKRPVKI ER--LKLYHR LFESLRV-LD LFKXXXXXXX ENSP00000313172/1-360 LGVNILHLSY LLYKKRPVKI EKELSGMYRR LFEPLRVPPD LFRRLTGQF- ENSBTAP00000014056/1-360 LGINILHLSY LLYKKRPVKI EKELKSIYRR LFEPLRVSPD LFRRLTGQF- bmy_13674T0/1-259 LGINILHLSY LLYKKRPVKI EKELKSIYRR LFEPLRVPPD LFKRLTGQF- BACU014174/1-388 LGINILHLSY LLFKKRPVKI EKELKSIYRR LFEPLRVPPD LFKRLTGQF- 151 200 ENSTTRP00000014144/1-360 XXXXXXXXXX XXXXXXXXXX XXXXXXXLSI KGRMKVSYRG HFLHNIYPCA ENSP00000313172/1-360 --CMIQTLKK GQTYAAEDKT SVDDRLSILL KGKMKVSYRG HFLHNIYPCA ENSBTAP00000014056/1-360 --CMIQTLKK GESYAVEELT SVDDRLSILL KGKMKVSYRG HFLHNIYPCA bmy_13674T0/1-259 --CMIQTLKK GETYAAEDIT SVDDRLSILL KGKMKVSYRG HFLHNIYPCA BACU014174/1-388 --CMIQTLKK GETYAAEDIT SVDDRLSILL KGKMKVSYRG HFLHNIYPCA 201 250 ENSTTRP00000014144/1-360 FIDSPEFRST QMHKGEKFQ- ---------- ---------- --VTIIADDN ENSP00000313172/1-360 FIDSPEFRST QMHKGEKFQ- ---------- ---------- --VTIIADDN ENSBTAP00000014056/1-360 FIDSPEFRST QMHKGEKFQ- ---------- ---------- --VTIIADDN bmy_13674T0/1-259 FIDSPEFRST QMHKGEKFQ- ---------- ---------- --VTIIADDN BACU014174/1-388 FIDSPEFRST QMHKGEKFQL PPLECRLHGI VFSCSLYAGF SMVTIIADDN 251 300 ENSTTRP00000014144/1-360 CRFLCWSRER LTYFLESEPF LYEIFRYLIG KDITNKLYSL NDPTLNDKTV ENSP00000313172/1-360 CRFLCWSRER LTYFLESEPF LYEIFRYLIG KDITNKLYSL NDPTLNDKKA ENSBTAP00000014056/1-360 CRFLCWSRER LTYFLESEPF LYEIFRYLIG KDITNKLYSL NDPTLNDKKI bmy_13674T0/1-259 CRFLCWSRER LTYFLESEPF LYEIFRYLIG KDITNKLYSL NDPTLNDKTV BACU014174/1-388 CRFLCWSRER LTYFLESEPF LYEIFRYLIG KDITNKLYSL NDPTLNDKTV 301 350 ENSTTRP00000014144/1-360 QKLDHQLSLC TQLSMLEMRN SIVSSSEDED GLHQFLRGTS SVSSL----- ENSP00000313172/1-360 KKLEHQLSLC TQISMLEMRN SIASSSDSDD GLHQFLRGTS SMSSL----- ENSBTAP00000014056/1-360 KKLDHQLSLC TQLSMLEMRN SIVSSSEDEE GLHQFLRGTS SVSSL----- bmy_13674T0/1-259 KKLDHQLSLC TQLSMLEMRN SIVSSSEDED GLHQFLRGTS SVSSL----- BACU014174/1-388 KKLDHQLSLC TQLSMLEMRN SIVSSSEDED GLHQFLRGTS SVSSLRSSTS 351 400 ENSTTRP00000014144/1-360 ---------- ---------- ---------- ---------- ---------- ENSP00000313172/1-360 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014056/1-360 ---------- ---------- ---------- ---------- ---------- bmy_13674T0/1-259 ---------- ---------- ---------- ---------- ---------- BACU014174/1-388 RCLNRSAEKR LFSQIQSPPV GVPSVVTRCG LAMAAWCSRS LSHLNTPNVV 401 450 ENSTTRP00000014144/1-360 ---------- ---------- ---HVSPLHQ RASAKMNPIE EGAENDDDVF ENSP00000313172/1-360 ---------- ---------- ---HVSSPHQ RASAKMKPIE EGAEDDDDVF ENSBTAP00000014056/1-360 ---------- ---------- ---HVPSPHQ RASPRMKPIE EGVEDDDDVF bmy_13674T0/1-259 ---------- ---------- --CKLSPPW- ---------- -----DSDGY BACU014174/1-388 HSSEYILLRW LCLFQALLSV EGMYVSPLHQ RASAKMNPIE EGMEDDDEVF 451 500 ENSTTRP00000014144/1-360 EPVSSNTLQV RRWP ENSP00000313172/1-360 EPASPNTLKV HQLP ENSBTAP00000014056/1-360 EPAPPNTFKV RQWP bmy_13674T0/1-259 C--------- ---- BACU014174/1-388 EPVSSNTLKV RRWP