KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:18 2014 Check: 00 .. Name: ENSP00000369014/1-568 Len: 587 Check: 3455 Weight: 1.00 Name: ENSBTAP00000014058/1-506 Len: 587 Check: 6002 Weight: 1.00 Name: ENSTTRP00000006974/1-567 Len: 587 Check: 7268 Weight: 1.00 Name: bmy_17158T0/1-570 Len: 587 Check: 5240 Weight: 1.00 Name: BACU004216/1-587 Len: 587 Check: 9822 Weight: 1.00 // 1 50 ENSP00000369014/1-568 ---------- ---------M VLLHWCLLWL LFPLSSRTQK LPTRDEELFQ ENSBTAP00000014058/1-506 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006974/1-567 ---------- ---------M VPLHWCMLWL LLPLSSRTQK LPTRDEELFQ bmy_17158T0/1-570 ---------- -------MRM VPLHWCMLWL LLPLSSRTQK LPTRDEELFQ BACU004216/1-587 MVLLARKVPG SLRYVTFGRM LPLHWCVLWL LLPLSSRTQK LPTRDEELFQ 51 100 ENSP00000369014/1-568 MQIRDKAFFH DSSVIPDGAE ISSYLFRDTP KRYFFVVEED NTPLSVTVTP ENSBTAP00000014058/1-506 ---------- ---------- ---------- -RYFFVVEED NTPLSVTVTP ENSTTRP00000006974/1-567 MQIRDKAFFH DSSVIPDGAE ISSYLFRDTP KRYFFVVEED NTPLSVTVTP bmy_17158T0/1-570 MQIRDKAFFH DSSVIPDGAE ISSYLFRDTP KRYFFVVEED NTPLSVTVTP BACU004216/1-587 MQIRDKAFFH DSSVIPDGAE ISSYLFRDTP KRYFFVVEED NTPLSVTVTP 101 150 ENSP00000369014/1-568 CDAPLEWKLS LQELPEDRSG EGSGDLEPLE QQKQQIINEE GTELFSYKGN ENSBTAP00000014058/1-506 CDAPLEWKLS LQELPEEASG EGSGDPEPLD QQKQQIINEE GTELFSYKGN ENSTTRP00000006974/1-567 CDAPLAWTLN LQELPEEASG EGSCDPEPLA QQKQQIINEE GAELFSYKGN bmy_17158T0/1-570 CDAPLAWTLS LQELPEEASG EGSGDPEPLD QQKQHIINVE GTELFSYKGN BACU004216/1-587 CDAPLAWTLS LQELPEDASG EGSGDPEPLD QQKQQIINVE GTELFSYKGN 151 200 ENSP00000369014/1-568 DVEYFISSSS PSGLYQLDLL STEKDTHFKV YATTTPESDQ PYPELPYDPR ENSBTAP00000014058/1-506 DVEYFISSSS PSGLYQLELL STEKDTHFKV YATTTPESDQ PYPELPYDPR ENSTTRP00000006974/1-567 DVEYFISSSS PSGLYQLELL STEKDTHFKV YATTTPESDQ PYPELPYDPR bmy_17158T0/1-570 DVEYFISSSS PSGLYQLELL STEKDTHFKV YATTTPESDQ PYPELPYDPR BACU004216/1-587 DVEYFISSSS PSGLYQLELL STEKDTHFKV YATTTPESDQ PYPELPYDPR 201 250 ENSP00000369014/1-568 VDVTSLGRTT VTLAWKPSPT ASLLKQPIQY CVVINKEHNF KSLCAVEAKL ENSBTAP00000014058/1-506 VDVTSLGRTT VTLAWKPSPT ASVLKQPIQY CVVVSREHNF KSLCAVEAKL ENSTTRP00000006974/1-567 VDVTSLGCTT VTLAWKPSPT ASLLKQPIQY CVVINKEHNF KSLCAVEAKL bmy_17158T0/1-570 VDVTSLGCTT VTLAWKPSPT ASLLKQPIQY CVVINKEHNF KSLCAVEAKL BACU004216/1-587 VDVTSLGCTT VTLAWKPSPT ASLLKQPIQY CVVINTEHNF KSLCAVDAKL 251 300 ENSP00000369014/1-568 SADDAFMMAP KPGLDFSPFD FAHFGFPSDN SGKERSFQAK PSPKLGRHVY ENSBTAP00000014058/1-506 SADDAFMMAP KPGLDFSPFD FAHFGFASEN SAKERSFLTK PSPKLGRHAH ENSTTRP00000006974/1-567 SADDAFMMAP KPGLDFSPFD FAHFGFASDN SGKEHSFLTK PSPKLGRHAY bmy_17158T0/1-570 SADDAFMMAP KPGLDFSPFD FAHFGFASDA SAKERSFLTK PSPKLGRHAY BACU004216/1-587 SADDAFMIAP KPGLDFSPFD FAHFGFASDA SGKERSFLTK PSPKLGRHAY 301 350 ENSP00000369014/1-568 SRPKVDIQKI CIGNKNIFTV SDLKPDTQYY FDVFVVNINS NMSTAYVGTF ENSBTAP00000014058/1-506 SRPKADIQKV CIGNKNIFTV SDLKPDTQYY FDVFVANSDS NMSTAYLGTF ENSTTRP00000006974/1-567 SRPKVDIQKI CIGNKNIFTV SDLKPDTQYY FDVFVANSNS NMSTAYVGTF bmy_17158T0/1-570 SRPKADIQKI CMGNKNIFTV SDLKPDTQYY FDVFVANSDS NMSTAYVGTF BACU004216/1-587 SRPKADIQKI CIGNKNIFTV SDLKPDTQYY FDVFVANSNS NMSTAYVGTF 351 400 ENSP00000369014/1-568 ARTKEEAKQK TVELKDGKIT DVFVKRKGAK FLRFAPVSSH QKVTFFIHSC ENSBTAP00000014058/1-506 ARTKEEAKQK TVELKDGKVT DVFVKRKGAK FLRFAPVPSH QKVTFFVHSC ENSTTRP00000006974/1-567 ARTKEEAKQK TVELKDGKVT DVFVKRKGAK FLRFAPISSH QKVTLFIHSC bmy_17158T0/1-570 ARTKEEAKQK TVGLKDGKVT DVFVKRKGAK FLRFAPVSSH QKVTFFIHSC BACU004216/1-587 ARTKEEAKQK TVELKDGKVT DVFVKRKGAK FLRFAPVSSH QKVTFFIHSC 401 450 ENSP00000369014/1-568 LDAVQIQVRR DGKLLLSQNV EGIQQFQLRG KPKAKYLVRL KGNKKGASML ENSBTAP00000014058/1-506 LDAVQIQVRR DGKLLLSQNV EGIRQFQLRG KPKAKYLIRL KGNKKGASML ENSTTRP00000006974/1-567 LDAVQIQVRR DGKLLLSQNV EGIRQFQLRG KPKAKYLIRL KGNKKGASML bmy_17158T0/1-570 LDAVQIQVRR DGKLLLSQSV EGIRQFQLRG KPKAKYLIRL KGNKKGAAML BACU004216/1-587 LDAVQIQVRR DGKLLLSQNV EGIRQFQLRG KPKAKYLIRL KGNKKGASML 451 500 ENSP00000369014/1-568 KILATTRPTK QSFPSLPEDT RIKAFDKLRT CSSATVAWLG TQERNKFCIY ENSBTAP00000014058/1-506 KILATTRPSK QSFPSLPEDR RIKAFDKLRT CSSVTVAWLG TQERNKFCIY ENSTTRP00000006974/1-567 KILATTRPSK QSFPSLPEDT RIKAFDKLRT V-SATVAGLG TQERNKFCIY bmy_17158T0/1-570 KILATTRPNK QSFPSLPEDT RIKAFDKLRT CSSATVAWLG TQERNKFCIY BACU004216/1-587 KILATTRPSK QSFPSLPEDT RIKAFDKLRT CSSATVAWLG TQERNKFCIY 501 550 ENSP00000369014/1-568 KKEVDDNYNE DQKKREQNQC LGPDIRKKSE KVLCKYFHSQ NLQKAVTTET ENSBTAP00000014058/1-506 KKEVDDNYNE DQKKREQNQC LGPDTRKKSE KVLCKYFHSQ NLQKAVTTET ENSTTRP00000006974/1-567 KKEVDDNYSE DQKKREQNQC LGPDTRKKSE KVLCKYFHSQ NLHKAVTTET bmy_17158T0/1-570 KKEVDDNYSE DQKKREQNQC LGPDTRKKSE KVLCKYFHSQ NLQKAVTTET BACU004216/1-587 KKEVNDNYSE DQKKREQNQC LGPDTRKKSE KVLCKYFHSQ NLQKAVTTET 551 600 ENSP00000369014/1-568 IKGLQPGKSY LLDVYVIGHG GHSVKYQSKV VKTRKFC ENSBTAP00000014058/1-506 IKGLQPGKSY LLDVYVTGHG GHSVKYQSKV VKTRKVC ENSTTRP00000006974/1-567 IKGLQPGKSY LLDVYVTGHG GHSVKYQSKV VKTRKFC bmy_17158T0/1-570 IKGLQPGKSY LLDVYVTGHG GHSVKYQSKV VKTRKFC BACU004216/1-587 IKGLQPGKSY LLDVYVTGHG GHSVKYQSKV VKTRKFC