KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:19 2014 Check: 00 .. Name: ENSTTRP00000009634/1-435 Len: 966 Check: 2830 Weight: 1.00 Name: bmy_11777T0/1-929 Len: 966 Check: 6403 Weight: 1.00 Name: ENSBTAP00000014063/1-497 Len: 966 Check: 5905 Weight: 1.00 Name: ENSP00000381066/1-419 Len: 966 Check: 46 Weight: 1.00 Name: BACU018261/1-454 Len: 966 Check: 1485 Weight: 1.00 // 1 50 ENSTTRP00000009634/1-435 MAASSLEQKL SRLEAKLKQE NREARRRIDL NLDISPQRPR PIIVITLSPA bmy_11777T0/1-929 MAASSLEQKL SRLEAKLKQE NREARRRIDL NLDISPQRPR PIIVITLSPA ENSBTAP00000014063/1-497 ---------- ---------- ---PHPVIVI TLSPAP---- ---------- ENSP00000381066/1-419 MAASSLEQKL SRLEAKLKQE NREARRRIDL NLDISPQRPR P--------- BACU018261/1-454 MAASSLEQKL SRLEAKLKQE NREARRRIDL NLDISPQRPR P--------- 51 100 ENSTTRP00000009634/1-435 PAPSQRAXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11777T0/1-929 PAPSQRAALQ LPLANDGGSR SPSSESSPQH PTPPARPRHM LGLPSTLFTP ENSBTAP00000014063/1-497 -APSQRAALQ LPLANDGGSR SPSSESSPQH PTPPARPRHM LGLPSTLFTP ENSP00000381066/1-419 -------TLQ LPLANDGGSR SPSSESSPQH PTPPARPRHM LGLPSTLFTP BACU018261/1-454 -------TLQ LPLAQDGGSR SPSSESSPQH PTPPARPRHM LGLPSTLFTP 101 150 ENSTTRP00000009634/1-435 XXXXXXXXXX XXXXXXXXXX XXXXXX---- ---------- ---------- bmy_11777T0/1-929 RSMESIEIDQ KLQEIMKQTG YLTIGG---- ---------- ---------- ENSBTAP00000014063/1-497 RSMESIEIDQ KLQEIMKQTG YLTIGG---- ---------- ---------- ENSP00000381066/1-419 RSMESIEIDQ KLQEIMKQTG YLTIGG---- ---------- ---------- BACU018261/1-454 RSMESIEIDQ KLQEIMKQTG YLTIGGQVPP FPWPPQGGWA GRSWSGLGWR 151 200 ENSTTRP00000009634/1-435 ---------- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11777T0/1-929 ---------- ---QRYQAEI NDLENLGEMG SGTCGQVWKM RFRKTGHVIA ENSBTAP00000014063/1-497 ---------- ---QRYQAEI NDLENLGEMG SGTCGQVWKM RFRKTGHVIA ENSP00000381066/1-419 ---------- ---QRYQAEI NDLENLGEMG SGTCGQVWKM RFRKTGHVIA BACU018261/1-454 AEARWTPSPG CPRQRYQAEI NDLENLGEMG SGTCGQVWKM RFRKTGHVIA 201 250 ENSTTRP00000009634/1-435 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11777T0/1-929 VKQMRRSGNK EENKRILMDL DVVLKSHDCP YIVQCFGTFI TNTDVFIAME ENSBTAP00000014063/1-497 VKQMRRSGNK EENKRILMDL DVVLKSHDCP YIVQCFGTFI TNTDVFIAME ENSP00000381066/1-419 VKQMRRSGNK EENKRILMDL DVVLKSHDCP YIVQCFGTFI TNTDVFIAME BACU018261/1-454 VKQMRRSGNK EENKRILMDL DVVLKSHDCP YIVQCFGTFI TNTDVFIAME 251 300 ENSTTRP00000009634/1-435 XXXXXXXXXX XXXXXXXXXX XXXXXXXXIV KALYYLKEKH GVIHRDVKPS bmy_11777T0/1-929 LMGTCAEKLK KRMQGPIPER ILGKMTVAIV KALYYLKEKH GVIHRDVKPS ENSBTAP00000014063/1-497 LMGTCAEKLK KRMQGPIPER ILGKMTVAIV KALYYLKEKH GVIHRDVKPS ENSP00000381066/1-419 LMGTCAEKLK KRMQGPIPER ILGKMTVAIV KALYYLKEKH GVIHRDVKPS BACU018261/1-454 LMGTCAEKLK KRMQGPIPER ILGKMTVAIV KALYYLKEKH GVIHRDVKPS 301 350 ENSTTRP00000009634/1-435 NILLDERGQI KLCDFGISGR LVDSKAKTRS AGCAAYMAPE RIDPPDPTKP bmy_11777T0/1-929 NILLDERGQI KLCDFGISGR LVDSKAKTRS AGCAAYMAPE RIDPPDPTKP ENSBTAP00000014063/1-497 NILLDERGQI KLCDFGISGR LVDSKAKTRS AGCAAYMAPE RIDPPDPTKP ENSP00000381066/1-419 NILLDERGQI KLCDFGISGR LVDSKAKTRS AGCAAYMAPE RIDPPDPTKP BACU018261/1-454 NILLDERGQI KLCDFGISGR LVDSKAKTRS AGCAAYMAPE RIDPPDPTKP 351 400 ENSTTRP00000009634/1-435 DYDIRADVWS LGISLVELAT GQFPYKNCKT DFEVLTKVLQ EEPPLLPG-- bmy_11777T0/1-929 DYDIRADVWS LGISLVELAT GQFPYKNCKT DFEVLTKVLQ EEPPLLPGTQ ENSBTAP00000014063/1-497 DYDIRADVWS LGISLVELAT GQFPYKNCKT DFEVLTKVLQ EEPPLLPG-- ENSP00000381066/1-419 DYDIRADVWS LGISLVELAT GQFPYKNCKT DFEVLTKVLQ EEPPLLPG-- BACU018261/1-454 DYDIRADVWS LGISLVELAT GQFPY--CKT DFEVLTKVLQ EEPPLLPG-- 401 450 ENSTTRP00000009634/1-435 -HMGF---SG DFQSFVKDCL TKD------- ---------- ---------- bmy_11777T0/1-929 LHQALRDAGG GRGILVQGCH GEDRVAAGER GPEPAPPALL QKGKNGAGTL ENSBTAP00000014063/1-497 -HMGF---SG DFQSFVKDCL TKD------- ---------- ---------- ENSP00000381066/1-419 -HMGF---SG DFQSFVKDCL TKD------- ---------- ---------- BACU018261/1-454 -HMGF---SG DFQSFVKDCL TKD------- ---------- ---------- 451 500 ENSTTRP00000009634/1-435 ---------- ---------- -----HRKRP KYNKLL---E HSFIKRYETL bmy_11777T0/1-929 PPNGPAVTPE GPLVLASLFP AAPGPRLRRP LFSLELSDAE DAFPRRAGPL ENSBTAP00000014063/1-497 ---------- ---------- -----HRKRP KYNKLL---E HSFIKRYETL ENSP00000381066/1-419 ---------- ---------- -----HRKRP KYNKLL---E HSFIKRYETL BACU018261/1-454 ---------- ---------- -----HRKRP KYNKLL---E HSFIKRYETL 501 550 ENSTTRP00000009634/1-435 EVDVASW-FK DVMAKTESPR ASG------- ---------- ----VLSQHH bmy_11777T0/1-929 EVPADSRVFV QCLPQDEACA GAGSGRDESL GADSPHLHTL TQPIVVTVPR ENSBTAP00000014063/1-497 EVDVASW-FK DVMAKTESPR TSG------- ---------- ----VLSQHH ENSP00000381066/1-419 EVDVASW-FK DVMAKTESPR TSG------- ---------- ----VLSQPH BACU018261/1-454 EVDVASW-FK DVMAKTESPR ASG------- ---------- ----VLSQHH 551 600 ENSTTRP00000009634/1-435 LP-------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 LPPRPPKGVP GTAVRPEPPA PAPGVLEPAP VVALVLAAFV LGAALAAGLG ENSBTAP00000014063/1-497 LP-------- ---------- ---------- ---------- ---------- ENSP00000381066/1-419 LP-------- ---------- ---------- ---------- ---------- BACU018261/1-454 LP-------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 LVCAHSGKRP RNDDTALTRL TGMKPPQRRR AAPARYLGEV TGPAAWSARE ENSBTAP00000014063/1-497 ---------- ---------- ---------- ---------- ---------- ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ------FFR- ---------- bmy_11777T0/1-929 KRQLLRLLQA RRGQPEPDAA ELARQLSGRS EVEIQDFLRH LKGRVVRKAT ENSBTAP00000014063/1-497 ---------- ---------- ---------- ------FFR- ---------- ENSP00000381066/1-419 ---------- ---------- ---------- ------FFR- ---------- BACU018261/1-454 ---------- ---------- ---------- ------FFR- ---------- 701 750 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 QRMHPGGPQG PRRRETQTPA PIEVWMDLAE KITGPLEEAL TVAFSQVLTI ENSBTAP00000014063/1-497 ---------- ---------- ---------- ---------- ---------- ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 AATEPNSLLH SKPPKPTQAR GKLLLLSAPG GQEDLGPEAP GPAPEAPRRQ ENSBTAP00000014063/1-497 ---------- ---------- -------APV PCGARALAAP TPFQSGAVRR ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 ESPGPAPKTQ GPAPEASSES LAGPSAEEDF SVDFEKIYKY LSSISRGGQG ENSBTAP00000014063/1-497 GGRLPAPCGA ARGPSGQPRV CAGGPGPSLP TLGPGPARLL RNTFLAPGPG ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 PELSAAESAV VLDLLMALPE ELSRLPCTAL VEHMSDMYLH LMAPQPNPAS ENSBTAP00000014063/1-497 PRPGAAARGL LRRLLGHLPA TAAAPRC--- ---------- ---------- ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000009634/1-435 ---------- ---------- ---------- ---------- ---------- bmy_11777T0/1-929 GGLGSGAEAD GTGSRGQEEA GQATPQAPEN AGPSEPIPTW QAAGICPLNP ENSBTAP00000014063/1-497 ---------- ---------- ---------- ---------- ---------- ENSP00000381066/1-419 ---------- ---------- ---------- ---------- ---------- BACU018261/1-454 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000009634/1-435 ---------- ------ bmy_11777T0/1-929 FLVPLELLGR VATPAR ENSBTAP00000014063/1-497 ---------- ------ ENSP00000381066/1-419 ---------- ------ BACU018261/1-454 ---------- ------