KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:24 2014 Check: 00 .. Name: ENSP00000347689/1-712 Len: 993 Check: 8331 Weight: 1.00 Name: ENSBTAP00000014100/1-694 Len: 993 Check: 952 Weight: 1.00 Name: ENSTTRP00000011762/1-579 Len: 993 Check: 6919 Weight: 1.00 Name: bmy_02621T0/1-491 Len: 993 Check: 6445 Weight: 1.00 Name: BACU016666/1-882 Len: 993 Check: 3095 Weight: 1.00 // 1 50 ENSP00000347689/1-712 -MENLGVGEG AEACSRLSRS RGRHSMTRAP KHLWRQPRRP IRIQQRFYSD ENSBTAP00000014100/1-694 MQGAPAPAPA PGPSSPRGSP RGSPRLFR-- ---KLLVNQS IRLQRRFTVA ENSTTRP00000011762/1-579 -METPGVQEG VEASRELNRA RSRQGIARAP KHLWRQPRHP IRIQRRFHSD bmy_02621T0/1-491 ---------- ---------- -MASNKFK-- ---WMLNREL THLSE----- BACU016666/1-882 MQGPPAPAPA PVPSSPRGSP RGSPGLFR-- ---KLLVNQS IRLQRRFTVA 51 100 ENSP00000347689/1-712 PDKSAGCRER DLSPRPELRK SRLSWPVSSC RRFDLENGLS CGRRALDPQS ENSBTAP00000014100/1-694 HPLC------ ---------- ---------- --LDLENGLS CGRSILDPRA ENSTTRP00000011762/1-579 PDKSVGRRER DLSPRPALEK SLRSWPSSFH RRLDLENGLS CGRSSLDHQA bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ------ASRS BACU016666/1-882 HPLC------ ---------- ---------- --LDLENGLS CRRSALDPQA 101 150 ENSP00000347689/1-712 SPGLGRIMQA PVPHSQRRES FLYRSDSDYE LSPKAMSRNS SVASDLHGED ENSBTAP00000014100/1-694 GSGFGQIVQA PAQHSQRRES FLYRSDSDYE LSSKTMSRNS SVASDLHGED ENSTTRP00000011762/1-579 GSGLGRVIQA PAQHSQRRES FLYRSDSDYE LSSKTMSRNS SVASDLHGED bmy_02621T0/1-491 GNQVSEYISQ T--------- FL-------- ---------- ---------- BACU016666/1-882 GSGLGRVIQA SAQHSQRRES FLYRSDSDYE LSSKTMSRNS SVASDLHGED 151 200 ENSP00000347689/1-712 MIVTPFAQVL ASLRTVRSNV AALARQQCLG AAKQGPVGNP SSSNQLPPAE ENSBTAP00000014100/1-694 LIVTPFAQVL ASLRTVRSNV AALARLQDRG AAKQACVCNT PSGSQPPPPK ENSTTRP00000011762/1-579 VIVTPFAQVL ASLRTVRSNV ATLAHLQGRG AA-------- ---------- bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 VIVTPFAQVL ASLRTVRSNV ASLAHLQGRG AAKDG----- ---------- 201 250 ENSP00000347689/1-712 DTGQKLALET LDELDWCLDQ LETLQTRHSV GEMASNKFKR ILNRELTHLS ENSBTAP00000014100/1-694 DTGQKLALET LDELDWCLDQ LETLQTRHSV GEMASNKFKR MLNRELTHLS ENSTTRP00000011762/1-579 DTGQKLALET LDELDWCLDQ LETLQARHSV GEMASNKFKW MLNRELTHLS bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 ---------- ---------- -----SRRGT GFPSG----- ---------- 251 300 ENSP00000347689/1-712 ETSRSGNQVS EYISRTFLDQ QTEVELPKVT AEEAPQPMSR ISGLHGLCHS ENSBTAP00000014100/1-694 ETSRSGNQVS EYISQTFLEQ QTEVELPRAT PAEPPRPVSQ ISSLRGLPHS ENSTTRP00000011762/1-579 EASSSGNQVS EYISRTFLDQ QTEVELPRVT PTEPPRPMSQ ISGLRGLPHS bmy_02621T0/1-491 ---------- --------DQ QTEVELPRVT PTEPPSPMSQ ISGLRGLPHS BACU016666/1-882 ---------- --------DQ QTEVELPRVT PTEPPSPMSQ ISGLRGLPHS 301 350 ENSP00000347689/1-712 ASLSSATVPR FGVQTDQEEQ LAKELEDTNK WGLDVFKVAE LSGNRPLTAI ENSBTAP00000014100/1-694 SSLSTATVPR FGVQTDQEGQ LAKELEDTSK WGLDVFKVAE LSGNRPLTAI ENSTTRP00000011762/1-579 TSLSAATVPR FGVQTDQEGQ LAKELEDTKK WGLDVFKVAE LSGNRPLTAI bmy_02621T0/1-491 TSLSAATVPR FGVQTDQEGQ LAKELEDTKK WGLDVFKVAE LSENRPLTAI BACU016666/1-882 TSLSAATVPR FGVQTDQEGQ LAKELEDTRK WGLDVFKVAE LSENRPLTAI 351 400 ENSP00000347689/1-712 IFSIFQERDL LKTFQIPADT LATYLLMLEG HYHANVAYHN SLHAADVAQS ENSBTAP00000014100/1-694 MFSIFQERDL LKTFQIPADT LATYLLMLEG HYHNDVAYHN SLHAADVAQS ENSTTRP00000011762/1-579 MFSIFQERDL LKTFRIPADT LATYLLTLEG HYHNDVAYHN SLHAADVAQS bmy_02621T0/1-491 MFSIFQERDL LKTFRIPADT LATYLLTLEG HYHNDVAYHN SLHAADVAQS BACU016666/1-882 MFSIFQERDL LKTFRIPADT LATYLLTLEG HYHNDVAYHN SLHAADVAQS 401 450 ENSP00000347689/1-712 THVLLATPAL EAVFTDLEIL AALFASAIHD VDHPGVSNQF LINTNSELAL ENSBTAP00000014100/1-694 THVLLATPAL EAVFTDLEVL AAIFASAIHD VDHPGVSNQF LINTNSELAL ENSTTRP00000011762/1-579 THVLLATPAL EAVFTDLEVL AAIFASAIHD VDHPGVSNQF LINTNSELAL bmy_02621T0/1-491 THVLLATPAL EAVFTDLEVL AAIFASAIHD VDHPGVSNQF LINTNSELAL BACU016666/1-882 THVLLATPAL EAVFTDLEVL AAIFASAIHD VDHPGVSNQF LINTNSELAL 451 500 ENSP00000347689/1-712 MYNDASVLEN HHLAVGFKLL QAENCDIFQN LSAKQRLSLR RMVIDMVLAT ENSBTAP00000014100/1-694 MYNDASVLEN HHLAVGFKLL QAENCDIFQN LSTKQRLSLR KMVIDIVLAT ENSTTRP00000011762/1-579 MYNDTSMLEN HHLAVGFKLL QAENCDIFQN LTTKQRLSLR RMVIDMVLAT bmy_02621T0/1-491 MYNDTSMLEN HHLAVGFKLL QAENCDIFQN LTIKQRLSLR RM----VLAT BACU016666/1-882 MYNDTSMLEN HHLAVGFKLL QAENCDIFQN LTIKQRLSLR RMVIDMVLAT 501 550 ENSP00000347689/1-712 DMSKHMNLLA DLKTMVETKK VTSLGVLLLD NYSDRIQVLQ NLVHCADLSN ENSBTAP00000014100/1-694 DMSKHMNLLA DLKTMVETKK VTSLGVLLLD NYSDRIQVLQ SLVHCADLSN ENSTTRP00000011762/1-579 DMSKHMNILA DLKTMVETKK VTSLGVLLLD NYSDHIQVLQ SLVHCADLSN bmy_02621T0/1-491 DMSKHMNILA DLKTMVETKK VTSLGVLLLD NYSDHIQVLQ SLVHCADLSN BACU016666/1-882 DMSKHMNILA DLKTMVETKK VTSLGVLLLD NYSDHIQVLQ SLVHCADLSN 551 600 ENSP00000347689/1-712 PTKPLPLYRQ WTDRIMAEFF QQGDRERESG LDISPMCDKH TASVEKSQVG ENSBTAP00000014100/1-694 PTKPLPLYRQ WTDRIMAEFF QQGDSERESG LDISPMCDKH TASVEKSQVG ENSTTRP00000011762/1-579 PTKPLPLYRQ WTDRIMAEFF QQGDRERESG LDISPMCDKH TASVEKSQ-- bmy_02621T0/1-491 PTKPLPLYRQ WTDRIMAEFF QQGDRERESG LDISPMCDKH TASVEKSQVG BACU016666/1-882 PTKPLPLYRQ WTDRIMAEFF QQGDRERESG LDISPMCDKH TASVEKSQVG 601 650 ENSP00000347689/1-712 FIDYIAHPLW ETWADLVHPD AQDLLDTLED NREWYQSKIP RSPSDLTNPE ENSBTAP00000014100/1-694 FIDYIAHPLW ETWADLVHPD AQDLLDTLED NREWYQSKIP RSPEDPTSPK ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 FIDYIAHPLW ETWADLVHPD AQDLLDTLED NREWYQSKIP RSPVDPTSPK BACU016666/1-882 FIDYIAHPLW ETWADLVHPD AQDLLDTLED NREWYQSKIP RSPVDPTSPK 651 700 ENSP00000347689/1-712 RDGPDRFQFE LTLEEAEEED EEEEEEGEET ALAKEALELP DTELLSPEAG ENSBTAP00000014100/1-694 QGSPDRFQFQ LPLEEAEEEE EEEEE----- ALDGEASKSP DTELLSSEAS ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 QGDPDRFQFQ LTLQEAEEEE GEEEG----- ALGGKASESP DTELLSPEAS BACU016666/1-882 QGDPDRFQFQ LTLQEAEEEE GEEEG----- ALGGKASESP DTELLSPEAS 701 750 ENSP00000347689/1-712 PDPGDLPLDN QRT------- ---------- ---------- ---------- ENSBTAP00000014100/1-694 PDPGAPHLDY QRTVGKPCTD HEGN------ ---------- ---------- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 PDPGALYLDN QRTMGKPCVD HEGN------ ---------- ---------- BACU016666/1-882 PDPGALYLDN QRTMGKPCVD HEGNDVTADC RGLSRYRRLR CHAAPHQRPG 751 800 ENSP00000347689/1-712 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014100/1-694 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 GPVTAAAKKV AATRVAAASV QGKMASATDS RYGQKESSDQ NFDYMFKILI 801 850 ENSP00000347689/1-712 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014100/1-694 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 IGNSSVGKTS FLFRYADDSF TPAFVSTVGI DFKVKTIYRN DKRIKLQIWD 851 900 ENSP00000347689/1-712 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014100/1-694 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 TAGQERYRTI TTAYYRGAMG FILMYDITNE ESFNAVQDWS TQIKTYSWDN 901 950 ENSP00000347689/1-712 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014100/1-694 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- ---------- bmy_02621T0/1-491 ---------- ---------- ---------- ---------- ---------- BACU016666/1-882 AQVLLVGNKC DMEDERVVSS ERGRQLADHL GFEFFEASAK DNINVKQTFE 951 1000 ENSP00000347689/1-712 ---------- ---------- ---------- ---------- --- ENSBTAP00000014100/1-694 --------AV AEPLGT---- ---------- ---------- --- ENSTTRP00000011762/1-579 ---------- ---------- ---------- ---------- --- bmy_02621T0/1-491 --------VM AEPLGT---- ---------- ---------- --- BACU016666/1-882 RLVDVICEKM SESLDTADPA VTGTKQGPQL TDQQAPPHQD CAC