KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:26 2014 Check: 00 .. Name: ENSTTRP00000009747/1-264 Len: 264 Check: 1310 Weight: 1.00 Name: ENSP00000215912/1-263 Len: 264 Check: 813 Weight: 1.00 Name: ENSBTAP00000014109/1-261 Len: 264 Check: 6062 Weight: 1.00 Name: bmy_01584T0/1-250 Len: 264 Check: 6848 Weight: 1.00 Name: BACU003316/1-264 Len: 264 Check: 5822 Weight: 1.00 // 1 50 ENSTTRP00000009747/1-264 MLLAWLQTIL VVSNMLLAKA YGSGGCFWXX XXXXXXXXXX XXXXXXXXXX ENSP00000215912/1-263 MLLAWVQAF- LVSNMLLAEA YGSGGCFWDN GHLYREDQTS PAPGLRCLNW ENSBTAP00000014109/1-261 MLLAWVRTI- LVSNMLLAEA YGSGGCFWDN GHLYRADQPS PAPGHSCLNW bmy_01584T0/1-250 ---------- VLSGGLLFLT ----GCLWDN DHLYRADQPS PAPGLLCLNW BACU003316/1-264 MLLAWLQTIL VVSNMLLAKT YGSGGCFWDN GHLYRADQLS PAPGLLCLNW 51 100 ENSTTRP00000009747/1-264 XXXXXXXXXX XXXXAGNHSY CRNPDQDPRG PWCYVSGEAG SPEKRPCKDM ENSP00000215912/1-263 LDAQSGLASA PVSGAGNHSY CRNPDEDPRG PWCYVSGEAG VPEKRPCEDL ENSBTAP00000014109/1-261 LDAQSGLAFA PESGAGNHSY CRNPDQDPRG PWCYVSGEAG APEKRPCQDL bmy_01584T0/1-250 LDAQSGLVSA PESGAGNHSY CRNPDQDPRG PWCYVSGEAG APEKRPCKDL BACU003316/1-264 LDAQSGLLFA PESGAGNHSY CRNPDQDPRG PWCYVSSEAG APEKRPCKDL 101 150 ENSTTRP00000009747/1-264 RCPETTFQGL PTSTTETEEV SEVPGGDEVQ VFAPANTLPA QSEAAAVQPV ENSP00000215912/1-263 RCPETTSQAL PAFTTEIQEA SEGPGADEVQ VFAPANALPA RSEAAAVQPV ENSBTAP00000014109/1-261 RCPDTTSQGL PTSATETEEA AEVPGGDE-- VFAPANALPA RSEAAAVQPV bmy_01584T0/1-250 RCPETTFQGP PTSTTETEEV SEVPGGDEVQ VFAPANTLPA QSEAAAVQPV BACU003316/1-264 RCPETTFQGP PTSTTETEEV SEVPGGDEVQ VFAPANTLPA QSEAAAVQPV 151 200 ENSTTRP00000009747/1-264 IGISQRVRVN SKEKKDLGTL GYVLGVTMMV IIIGIGAGIV LGYTYKRGKD ENSP00000215912/1-263 IGISQRVRMN SKEKKDLGTL GYVLGITMMV IIIAIGAGII LGYSYKRGKD ENSBTAP00000014109/1-261 IGISQRVRVN SKEKKDLGTL GYVLGITMMV IIVVIGAGIV LGYTYKRGKD bmy_01584T0/1-250 IGISQRVRVN SKEKKDLGTL GYVLGVTMMV IIIGIGAGIV LGYTYKRGKD BACU003316/1-264 IGISQRVRVN SKEKKDLGTL GYVLGVTMMV IIIGIGAGIV LGYTYKRGKD 201 250 ENSTTRP00000009747/1-264 LKEQHERKVC EREMQRITLP LSAFTNPNCE IVDEKTIVVH ASQTPVDLQE ENSP00000215912/1-263 LKEQHDQKVC EREMQRITLP LSAFTNPTCE IVDEKTVVVH TSQTPVDPQE ENSBTAP00000014109/1-261 LKAQHEQKVC ERELQRITLP LSAFTNPTCE IVDEKTVVVH ASQTPVDLQE bmy_01584T0/1-250 LKEQHERKVC EREMQRITLP LSAFTNPTCE IVDEKTVVVH ASQTPVDLQE BACU003316/1-264 LKEQHERKVC EREMQRITLP LSAFTNPTCE IVDEKTIVVH ASQTPVDLQE 251 300 ENSTTRP00000009747/1-264 GSAPLMGQAG TPGA ENSP00000215912/1-263 GTTPLMGQAG TPGA ENSBTAP00000014109/1-261 GSAPLMGQAG TPGA bmy_01584T0/1-250 GSAPLMGQAG TPGA BACU003316/1-264 GSAPLMGQAG TPGA