KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:26 2014 Check: 00 .. Name: ENSP00000357080/1-414 Len: 458 Check: 994 Weight: 1.00 Name: ENSBTAP00000014115/1-421 Len: 458 Check: 7775 Weight: 1.00 Name: ENSTTRP00000001703/1-408 Len: 458 Check: 9553 Weight: 1.00 Name: bmy_06300T0/1-440 Len: 458 Check: 8356 Weight: 1.00 Name: BACU003888/1-399 Len: 458 Check: 5493 Weight: 1.00 // 1 50 ENSP00000357080/1-414 MRVGGAFHLL LVCLSP---- ---------- ---------- ---------- ENSBTAP00000014115/1-421 MGVRGAFHLL LACLSP---- ---------- ---------- ---------- ENSTTRP00000001703/1-408 MRVHGAFHLL LVCLSP---- ---------- ---------- ---------- bmy_06300T0/1-440 MRVRGAFRLL LVCLSPASLF SHIRWKYFLS ATARGMKPWS CSPYPVCPAC BACU003888/1-399 MKPTEK---- ---------- ---------- ---------- ---------- 51 100 ENSP00000357080/1-414 --ALLSAVRI NGDGQEVLYL AEGDNVRLGC PYVLDPEDYG PNGLDIEWMQ ENSBTAP00000014115/1-421 --ALLSAVRI NGDGQEILYL AEGDNVRLGC PYILDPEDYG PNGLDIEWKQ ENSTTRP00000001703/1-408 --ALLPAVRI SGNAKEVLNL AEGDSVRLNC PYILDPEDSG SDALGIEWMQ bmy_06300T0/1-440 VLALLSAVQI NGDDKETLQV AEGDSVKLGC PYTLDPEDYG PNGLGIEWMQ BACU003888/1-399 --SLLPAVRI TGDNQETLNV AEGDSIKLGC PYILDPEDYG PNGLGIEWMQ 101 150 ENSP00000357080/1-414 VNSDPAHHRE NVFLSYQDKR INHGSLPHLQ QRVRFAASDP SQYDASINLM ENSBTAP00000014115/1-421 VNSDPS-HRE NVFLSYQDKT INHGNLPHLQ QRVRFAASDP SQYDASITLS ENSTTRP00000001703/1-408 VNPEPS-RQE KVFLSYGDKR ANHGDLPDLQ QRAHFAAPDP SQYDASINLS bmy_06300T0/1-440 VNAEPS-RQE NV-----NKR VNRGGLPSLQ QRVSFTAPDP SQYDASINLS BACU003888/1-399 VNPEPS-RQE NVFLSYQNKR VNHGGLPSLQ QRVRFAAPDP SQYDASINLL 151 200 ENSP00000357080/1-414 NLQVSDTATY ECRVKKTTMA TRKVIVTVQA RPAVPMCWTE GHMTYGNDVV ENSBTAP00000014115/1-421 NLQVSDTATY ECRVKKTTVA TRRVIITVQA RPAVPLCWSE GHFTHGNDVV ENSTTRP00000001703/1-408 NLQISDAATY ECRVKKTTVA TRTVIITVAA RPVEPKCWIE GHMLYGHDVV bmy_06300T0/1-440 NLQVSDTATY ECRVKKTTVA TRTVIITVQA RPVVPKCWSE GSMSFGNNVV BACU003888/1-399 NLQLSDTATY ECRVKKTTVA TRTVIITVQA RPAMPRCWYE GHMSYGNNVV 201 250 ENSP00000357080/1-414 LKCYASGGSQ PLSYKWAKIS GHHYPYRAGS YTSQHSYHSE LSYQESFHSS ENSBTAP00000014115/1-421 LKCFANGGSP PLTYKWAKIS GHTHPYRAGS YHSQHSFHSE LSYHESFHSS ENSTTRP00000001703/1-408 LKCFVSGGSP PFIYKWNRIR WSAHPYRASS YQSQDTFQSE FSYDESF-SS bmy_06300T0/1-440 LKCSVSGGSL PLTYKWNKIS GHTSPYRASS YQSQGSFHSE TAYDESFYSS BACU003888/1-399 LKCSVIGGSL PLTYKWDKIS GYTRPYRASS YQSQGSFHSE ASYDESFYIS 251 300 ENSP00000357080/1-414 INQ--GLNNG DLVLKDISRA DDGLYQCTVA NNVGYSVCVV EVKVSDSRRI ENSBTAP00000014115/1-421 ISQVSGLNNG DLVLKDISYK DDGLYQCTVA NHVGYSVCVV EVKVSDTRRI ENSTTRP00000001703/1-408 TSQ--GMSHG ELVLKHLSHK HNGLYQCTVA NHAGHSVCVV EVKVSGVAHI bmy_06300T0/1-440 TSQ--DLNDG ELVLTRISYR DDGLYQCTVA NNVGYSVCVV EMKVSGRWRI BACU003888/1-399 MSQ--GLNHG ELLLIDISAK DDGLYQCTVA NNVGYSVCVV EVQVSAPWHV 301 350 ENSP00000357080/1-414 GVIIGIVLGS LLALGCLAVG IWGLVCCCCG GSG-AGGARG AFGYGN--GG ENSBTAP00000014115/1-421 GIIIGAVLGS LLALGCLLVG IWGLVCCCCG GAGVGGGSRG AFGYGGGVGG ENSTTRP00000001703/1-408 GIIIGIVLGC LLLLGCLILG IWGLVHCCC- -----RGPRG AFCC----RS bmy_06300T0/1-440 GIIIGAVVGS LLMLGCLTLG IWGLVWACC- -----RGPRG AFCY----SG BACU003888/1-399 GIIIGAVLGS LLMLGCLTFG IWGLVRGCR- -----RGPRG AFCY----SG 351 400 ENSP00000357080/1-414 GVGGGACGDL ASEIREDAVA PGCKASGRGS RVTHLLGYPT QNVSRSLRRK ENSBTAP00000014115/1-421 GVGGGACGDL SNEIREDAVA PGCKASGRGN RVTHLLGYPT QNVSRSLRRK ENSTTRP00000001703/1-408 QVRRNACCDL PNDIREDDVA PGCKAKRRGS SVTHILGYPM QKIRHSLSLK bmy_06300T0/1-440 KVRRNACCDL PNDIREDDVA PGCKAKGRGS SVTQFLGYPM QKIRRSLRLK BACU003888/1-399 KVRRKACCDL PNDIREDDVA PGCKAMRRGS SVTQILGYPM QKVRRSLRLK 401 450 ENSP00000357080/1-414 YAPPPCGGPE DVALAPCTAA AA--CEAGPS PVYVKVKSAE PADC-AEGPV ENSBTAP00000014115/1-421 YAPQPCGGPE DVALAARPAP AAAACEAGPS PVYVQVKSAE PASSTAEGPL ENSTTRP00000001703/1-408 YAPPHCEGPE DLALASSAAA AALDCKADQS RVYVKVQSAE PAACAAEGPL bmy_06300T0/1-440 SASPHCEGPD DLALPSSAAP AALDCEADQS PVYAKVKSAE PADCAAEGPL BACU003888/1-399 YAPPHCEGPE DSALASSAAA AALDCEADRS LVYVKVKSAE PADCAAEGPL 451 500 ENSP00000357080/1-414 QCKNGLLV ENSBTAP00000014115/1-421 QSKDGLLV ENSTTRP00000001703/1-408 PCKDGLLV bmy_06300T0/1-440 PCKDSLLV BACU003888/1-399 PCKDSLLV