KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:29 2014 Check: 00 .. Name: ENSTTRP00000011603/1-915 Len: 919 Check: 696 Weight: 1.00 Name: ENSBTAP00000014143/1-915 Len: 919 Check: 6330 Weight: 1.00 Name: bmy_16303T0/1-899 Len: 919 Check: 5355 Weight: 1.00 Name: BACU015912/1-918 Len: 919 Check: 8407 Weight: 1.00 // 1 50 ENSTTRP00000011603/1-915 MGPGALSF-L LLLLLLLVAT GDADMKGHFD PAKCRYALGM QDRTIPDGDI ENSBTAP00000014143/1-915 MGPGALSF-- -LLLLLLVAT GDADMKGHFD PAKCRYALGM QDRTIPDGDI bmy_16303T0/1-899 MGPGAFSFLL LLLLLLLVAT GDADMKGHFD PAKCRYALGM QDRTIPDGDI BACU015912/1-918 MGPGALSFLL LLLLLLLVAT GDADMKGHFD PAKCRYALGM QDRTIPDGDI 51 100 ENSTTRP00000011603/1-915 SASSSWSDST AARHSRLESS DGDGAWCPAV PVFPKEEEYL QVDLRRLHLV ENSBTAP00000014143/1-915 SASSSWSDST AARHSRLESS DGDGAWCPAG PVFPKEEEYL QVDLRRLHLV bmy_16303T0/1-899 SASSSWSDST AARHSRLESS DGDGAWCPAG PVFPKEEEYL QVDLRRLHLV BACU015912/1-918 SASSSWSDST AARHSRLESS DGDGAWCPAG PVFPKEEEYL QVDLRRLHLV 101 150 ENSTTRP00000011603/1-915 ALVGTQGRHA GGLGKEFSPS YRLRYSRDGH RWMDWRDRWG QEVILGNEDP ENSBTAP00000014143/1-915 ALVGTQGRHA GGLGKEFSPS YRLRYSRDGH RWMDWRDRWG QEVILGNEDP bmy_16303T0/1-899 ALVGTQGRHA GGLGKEFSPS YRLRYSRDGH RWMDWRDRWG QEVILGNEDP BACU015912/1-918 ALVGTQGRHA GGLGKEFSPS YRLRYSRDGH RWMDWRDRWG QEVILGNEDP 151 200 ENSTTRP00000011603/1-915 GGVVLKDLGP PMVARLVRFY PRADRVMSVC LRVELYGCLW KXXXXXXXXX ENSBTAP00000014143/1-915 GGVVLKDLGP PMVARLVRFY PRADRVMSVC LRVELYGCLW KGGAGTGERG bmy_16303T0/1-899 GGVVLKDLGP PMVARLVRFY PRADRVMSVC LRVELYGCLW KDGLLSYMAP BACU015912/1-918 GGVVLKDLGP PMVARLVRFY PRADRVMSVC LRVELYGCLW KDGLLSYMAP 201 250 ENSTTRP00000011603/1-915 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X---XXXXXX XXXXXXXXXX ENSBTAP00000014143/1-915 VKDPLSCWEA VPMSEEGTEG PETHPIARLQ YGGLGQLADG VVGLDDFRKS bmy_16303T0/1-899 VGQTMYLSEA VHLNDSTYDG HTTHTVGGLQ YGGLGQLADG VVGLDDFRKS BACU015912/1-918 VGQTMYLSEA VHLNDSTYDG HTTHTVGGLQ YGGLGQLADG VVGLDDFRKS 251 300 ENSTTRP00000011603/1-915 XXXXXXXXXX XXXXXXXXXP SGGVEMEFEF DRLRTFNAMQ VHCNNMHTLG ENSBTAP00000014143/1-915 QELRVWPGYD YVGWSNHSFP SGYVEMEFEF ERLRAFQAMQ VHCNNMHTLG bmy_16303T0/1-899 QELRVWPGYD YVGWSNHSFP SGYVEMEFEF DRLRTFHAMQ VHCNNMHTLG BACU015912/1-918 QELRVWPGYD YVGWSNHSFP SGYVEMEFEF DRLRTFHAMQ VHCNNMHTLG 301 350 ENSTTRP00000011603/1-915 ARLPGGVECR FKRGPAMAWE GEPVRHALGG SLGDPRARTV SVPLGGRVGR ENSBTAP00000014143/1-915 ARLPGGVECR FKRGPAMAWE GEPVRHALGG SLGDPRARTV SVPLGGRMGR bmy_16303T0/1-899 ARLPGGVECR FKRGPAMAWE GEPVRHALGG SLGDPRARTV SMPLGGRVGR BACU015912/1-918 ARLPGGVECR FKRGPAMAWE GEPVRHALGG SLGDPRARTV SVPLGGRVGR 351 400 ENSTTRP00000011603/1-915 FLQCRFLFAG PWLLFSEISF ISDVVNDSSL ALGGTFAPAP WWPPGPPPTN ENSBTAP00000014143/1-915 FLQCRFLFAG PWLLFSEISF ISDVVNDSSL ALGGTFPPAP WWPPGPPPTN bmy_16303T0/1-899 FLQCRFLFAG PWLLFSEISF ISDVVNDSSL ALGGTFAPAP WWPPGPPPTN BACU015912/1-918 FLQCRFLFAG PWLLFSEISF ISDVVNDSSL ALGGTFAPAP WWPPGPPPTN 401 450 ENSTTRP00000011603/1-915 FSSLELEPRG QQPVAKAEGS PTAILIGCLV AIILLLLLII ALMLWRLHWR ENSBTAP00000014143/1-915 FSSLELEPRG QQPVAKAEGS PTAILIGCLV AIILLLLLII ALMLWRLHWR bmy_16303T0/1-899 FSSLELEPRG QQPVAKAEGS PTAILIGCLV AIILLLLLII ALMLWRLHWR BACU015912/1-918 FSSLELEPRG QQPVAKAEGS PTAILIGCLV AIILLLLLII ALMLWRLHWR 451 500 ENSTTRP00000011603/1-915 KLLSKAERRV LEEELTVHLS VPGDTILINN RPGPREPPPY QEPRPRGNPP ENSBTAP00000014143/1-915 RLLSKAERRV LEEELTVHLS VPGDTILINN RPGPREPPPY QEPRPRGNPP bmy_16303T0/1-899 KLLSKAERRV LEEELTVHLS VPGDTILINN RPGPREPPPY QEPRPRGNPP BACU015912/1-918 KLLSKAERRV LEEELTVHLS VPGDTILINN RPGPREPPPY QEPRPRGNPP 501 550 ENSTTRP00000011603/1-915 HSAPSVPNGS ALLLSNPAYR LLLATYARPP RGPGPPTPAW AKPTNTQACS ENSBTAP00000014143/1-915 HSAPSVPNSS ALLLSNPAYR LLLATYARPP RGPGPPTPAW AKPTNTQACS bmy_16303T0/1-899 HSAPSVPNGS ALLLSNPAYR LLLATYARPP RGPGPPTPAW AKPTNTQACS BACU015912/1-918 HSAPNVPNGS ALLLSNPAYR LLLATYARPP RGPGPPTPAW AKPTNTQACS 551 600 ENSTTRP00000011603/1-915 GDYMEPEKPG APLLPPPPQN SVPHYAEADI VTLQGVTGGN TYAVPALPPG ENSBTAP00000014143/1-915 GDYMEPEKPG APLLPPPPQN SVPHYAEADI VTLQGVTGGN TYAVPALPPG bmy_16303T0/1-899 GDYMEPEKPG APLLPPPPQN SVPHYAEADI VTLQGVTGGN TYAVPALPPG BACU015912/1-918 GDYMEPEKPG APLLPPPPQN SVPHYAEADI VTLQGVTGGN TYAVPALPPG 601 650 ENSTTRP00000011603/1-915 AAGDGPPRVD FPRSRLRFKE KLGEGQFGEV HLCEVENPQD LVSLDFPLSV ENSBTAP00000014143/1-915 AAGDGPPRVD FPRSRLRFKE KLGEGQFGEV HLCEVESPQD LVSLDFPLSV bmy_16303T0/1-899 AAGDGPPRVD FPRSRLRFKE KLGEGQFGEV HLCEVENPQD LVSLDFPLSV BACU015912/1-918 AAGDGPPRVD FPRSRLRFKE KLGEGQFGEV HLCEVENPQD LVSLDFPLSV 651 700 ENSTTRP00000011603/1-915 RKEHPLLVAV KILRPDATKN ARNDFLKEVK IMSRLKDPNI IRLLGVCVQD ENSBTAP00000014143/1-915 RKGHPLLVAV KILRSDATKN ARNDFLKEVK IMSRLKDPNI IRLLGVCVQD bmy_16303T0/1-899 CKEHPLLVAV KILRPDATKN ARNDFLKEVK IMSRLKDPNI IRLLGVCVQD BACU015912/1-918 CKEHPLLVAV KILRPDATKN ARNDFLKEVK IMSRLKDPNI IRLLGVCVQD 701 750 ENSTTRP00000011603/1-915 DPLCMITXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXYPMLL ENSBTAP00000014143/1-915 DPLCMIT-DY MENGDLNQFL SAHQLEDKAT EGPGDGEAAQ GPTISYPMLL bmy_16303T0/1-899 DPLCMIT-DY MENGDLNQFL SAHQLEDKAV EEDRDGEAAQ GPTISYPMLL BACU015912/1-918 DPLCMIT-DY MENGDLNQFL SAHQLEDKAV EEDRDGEAAQ GPTISYPMLL 751 800 ENSTTRP00000011603/1-915 HVAAQIASGM RYLATLNFVH RDLATRNCLV GENFTIKIAD FGMSRNLYAG ENSBTAP00000014143/1-915 HVAAQIASGM RYLATLNFVH RDLATRNCLV GENFTIKIAD FGMSRNLYAG bmy_16303T0/1-899 HVAAQIASGM RYLATLNFVH RDLATRNCLV GENFTIKIAD FGMSRNLYAG BACU015912/1-918 HVAAQIASGM RYLATLNFVH RDLATRNCLV GENFTIKIAD FGMSRNLYAG 801 850 ENSTTRP00000011603/1-915 DYYRVQGRAV LPIRWMAWEC ILMGKFTTAS DVWAFGVTLW EVLMLCRAQP ENSBTAP00000014143/1-915 DYYRVQGRAV LPIRWMAWEC ILMGKFTTAS DVWAFGVTLW EVLMLCRAQP bmy_16303T0/1-899 DYYR------ ---------- ---GKFTTAS DVWAFGVTLW EVLMLCRAQP BACU015912/1-918 DYYRVQGRAV LPIRWMAWEC ILMGKFTTAS DVWAFGVTLW EVLMLCRAQP 851 900 ENSTTRP00000011603/1-915 FGQLTDEQVI ENAGEFFRDQ GRQVYLSRPP ACPLGLYELM LRCWSREPEQ ENSBTAP00000014143/1-915 FGQLTDEQVI ENAGEFFRDQ GRQVYLSRPP ACPLSLYELM LRCWSREPEQ bmy_16303T0/1-899 FGQLTDEQVI ENAGEFFRDQ GRQVYLSRPP ACPLGLYELM LRCWSREPEQ BACU015912/1-918 FGQLTDEQVI ENAGEFFRDQ GRQVYLSRPP ACPLGLYELM LRCWSREPEQ 901 950 ENSTTRP00000011603/1-915 RPPFSQLHRF LAEDALNTV ENSBTAP00000014143/1-915 RPPFSQLHRF LAEDAVNTV bmy_16303T0/1-899 RPPFSQLHRF LAEDALNTV BACU015912/1-918 RPPFSQLHRF LAEDALNTV