KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:35 2014 Check: 00 .. Name: ENSP00000320917/1-709 Len: 742 Check: 3978 Weight: 1.00 Name: ENSBTAP00000014206/1-711 Len: 742 Check: 1215 Weight: 1.00 Name: bmy_13740T0/1-698 Len: 742 Check: 4748 Weight: 1.00 Name: BACU002494/1-702 Len: 742 Check: 4437 Weight: 1.00 Name: ENSTTRP00000007582/1-707 Len: 742 Check: 2086 Weight: 1.00 // 1 50 ENSP00000320917/1-709 MGHRTAMPEP RGSSQLRVNA AFAARYNRYR EREELQRLKD RYGDRDSSSD ENSBTAP00000014206/1-711 VGWRAAMPEP RGSSPLRVNA AFAARYGRYR EREELQRLKD RYGDRHSSSD bmy_13740T0/1-698 ------MPEP RGSSPLRVNA AFAARYGRYR EREELQRLKD RYGDRDSCGD BACU002494/1-702 ------MPEP RGSSPLRVNA AFAARYGRYR EREELQRLKD RYGDRDSCGD ENSTTRP00000007582/1-707 VDRRAAMPEP RGSSPLRVNA AFAARYGRYR EREELQRLKD RYGDRDSCGD 51 100 ENSP00000320917/1-709 SSSESDSSDE RVEFDPQQER DFYKTLSLLK KKDPRIYQKD ATFYNRTASS ENSBTAP00000014206/1-711 SSSESDSSDE HVEFDPQQER DFYRTLSLLK KKDPRIYQKD ATFYQRTASS bmy_13740T0/1-698 SSSESDSGDE RVEFDTQQER DFYRTLSLLK KKDPCIYQKD ATFYQRTASS BACU002494/1-702 SSSESDSGDE RVEFDTQQER DFYRTLSLLK KKDPRIYQKD ATFYQRTASS ENSTTRP00000007582/1-707 SSSESDSGDE RVEFDTQQER DFYRTLSLLK KKDPRIYQKD ATFYQRTASS 101 150 ENSP00000320917/1-709 SDSEEDPEAL EKQKKVRPMY LKDYERKVIL EKAGKYVDEE NSDGETSNHR ENSBTAP00000014206/1-711 SDSEEEPAA- EKRKKVQPMY LKDYERKVIL EKGGKYVDEE NSDGETSNQR bmy_13740T0/1-698 SDSKEEPAAE EKQKKVQSMY LKDYERKVIL EKGGPW--GV YSEAFFLLHT BACU002494/1-702 SDSKEEPAAE EKQKKVQSMY LKDYERKVIL EKGGKYVDEE NSDGEASNQR ENSTTRP00000007582/1-707 SDSKEEPAAE DKQKKVQPMY LKDYERKVIL EKGGKYIDEE NSDGEASNQR 151 200 ENSP00000320917/1-709 LQETSSQSYV EEQKQLKESF RAFVEDSEDE DGAGEGGSSL LQKRAKTRQE ENSBTAP00000014206/1-711 LQQSSSKSYV EEQKQLKESF RAFVEDSEDE DSAEEGGSGL LQKRAKSKEE bmy_13740T0/1-698 ANMSMRRIQM GRPPIRDSSF RAFVEDSEDE DSAGEGGSGL LQKRAKSREE BACU002494/1-702 LQQTSSKSYV EEQKQLKESF RAFVEDSEDE DSAGEGGSGL LQKRAKSREE ENSTTRP00000007582/1-707 LQQTSLKSYV EEQKQLKESF RAFVEDSEDE DSAGEGSSGL LQKRAKSREE 201 250 ENSP00000320917/1-709 K--------- ---------- ---------- -AQEEADYIE WLKGQKEIRN ENSBTAP00000014206/1-711 K--------- ---------- ---------- -AQEDADYIE WLKGQKEIQN bmy_13740T0/1-698 KVGAGAQLDG GWWQRGGPGA PTDPQRWPSP QAQEDADYIE WLKGQKEIQN BACU002494/1-702 K--------- ---------- ---------- -AQEDADYIE WLKGQKEIQN ENSTTRP00000007582/1-707 K--------- ---------- ---------- -AQEDADYIE WLKGQKEIQN 251 300 ENSP00000320917/1-709 PDSLKELTHL KEYWNDPELD EGERFLRDYI LNKRYEEEEE EEEDEEEMEE ENSBTAP00000014206/1-711 PDTLKELTHL REFWNNPELD EGERFLRDYI LNKRYEEEGE EEDEEEEDEE bmy_13740T0/1-698 PDTLKELTHL KQYWNNPELD EGERFLRDYI LNKRYEEEGD EEEEEEG-EE BACU002494/1-702 PDTLKELTHL KEYWNNPELD EGECFLRDYI LNKRYEEEGD EEEEEEG-EE ENSTTRP00000007582/1-707 PDTLKELTHL KEYWNNPELD EGERFLRDYI LNKRYEEEGD EEEEEEE-KK 301 350 ENSP00000320917/1-709 EEGVHGPPVQ LAVDDSSDEG ELFLKKQEDF EQKYNFRFEE PDSASVKTYP ENSBTAP00000014206/1-711 EERVPGPPVQ LAVDDSSDEG ELFLKKQEDF ELKYNFRFEE PDSASVKTYP bmy_13740T0/1-698 G--VPGPPVQ LAVDDSSDEG ELFLKKQEDF EHKYNFRFEE PDSASVKTYP BACU002494/1-702 G--VPGPPVQ LAVDDSSDEG ELFLKKQEDF EHKYNFRFEE PDSASVKTYP ENSTTRP00000007582/1-707 GEEVPGPPVQ LAVDDSSDEG ELFLKKQEDF EHKYNFRFEE PDSASVKTYP 351 400 ENSP00000320917/1-709 RSIASSVRRK DERRKEKREE TRERKKREKA KKQEELKQLK NLKRKEILAK ENSBTAP00000014206/1-711 RSIASSVRRK DERRKEKREE TRERKKREKA RKQEELKQLK NLKRKEILAK bmy_13740T0/1-698 RNITSSVRQK DERRKERREE TRERKRREKA RKQEELKQLK NLKRKEILAK BACU002494/1-702 RNITSSVRQK DERRKERREE TRERKRREKA RKQEELKQLK NLKRKEILAK ENSTTRP00000007582/1-707 RNITSSVRQK DERRKERREE TRERKRREKA RKQEELKQLK NLKRKEILAK 401 450 ENSP00000320917/1-709 LEKLRKVTGN EMLGLEEGDL EDDFDPAQHD QLMQKCFGDE YYGAVEEEKP ENSBTAP00000014206/1-711 LERLRQVTGN ETLGFEEQDL EGDFDPARHD QLMQKCFGDE YYGAMEEEKP bmy_13740T0/1-698 LERLRQVTGN ETLGFEEQDL EDDFDPAQHD QLMQKCFGDK YYGTMEEEKP BACU002494/1-702 LERLRQVTGN ETLGFEEQDL EDDFDPAQHD QLMQKCFGDK YYGTMEEEKP ENSTTRP00000007582/1-707 LERLRQVTGN ETLGFEEQDL EDDFDPAQHD QLMQKCFGDK YYGTMEEEKP 451 500 ENSP00000320917/1-709 QFEEEEGLED DWNWDTWDGP EQEGDWSQQE LHCEDPNFNM DADYDPSQPR ENSBTAP00000014206/1-711 QFEEEEGLED DWNWDTWAGP EQGGAWSQQE PHCEDPDFNM DADYDPSQPR bmy_13740T0/1-698 QFEEEEGLED DWNWDTWAGP EQGGAWSQQE PHCEDPDFNM DADYDPSQPQ BACU002494/1-702 QFEEEEGLED DWNWDTWAGP EQGGAWSQQE PHCEDPDFNM DADYDPSRPQ ENSTTRP00000007582/1-707 QFEEEEGLED DWNWDMWAGP EQSGAWSQQE PHCEDPDFNM DADYDPSQPQ 501 550 ENSP00000320917/1-709 KKKREAPLTG KKKRKSPFAA AVGQEKPVFE PGDKTFEEYL DEYYRLDYED ENSBTAP00000014206/1-711 KKQREAPSLG KKKRKSPFAT AVGQEKPVFD PGDKTFEEYL DEYYRLDYED bmy_13740T0/1-698 KKQRKAPSLG KKKRKSPFAT AVGQEKPVFD PGDKTFEEYL DEYYRLDYED BACU002494/1-702 K-QRKAPSLG KKKRKSPFAT AVGQEKPVFD PGDKTFEEYL DEYYRLDYED ENSTTRP00000007582/1-707 KQQRKSPSLG KKKRKSPFAA AVEQEKPVFD PGDKTFEEYL DEYYQLDYED 551 600 ENSP00000320917/1-709 IIDDLPCRFK YRTVVPCDFG LSTEEILAAD DKELNRWCSL KKTCMYRSEQ ENSBTAP00000014206/1-711 IIDDLPCRFK YRTVVPCDFG LSTEEILAAD DKELNRWCSL KKTCMYRSEQ bmy_13740T0/1-698 IIDDLPCRFK YRTVVPCDFG LSTEEILTAD DKELNRWCSL KKTCMYR--- BACU002494/1-702 IIDDLPCRFK YRTVVPCDFG LSTEEILTAD DKELNRWCSL KKTCMYRSEQ ENSTTRP00000007582/1-707 IIDDLPCRFK YRTVVPCDFG LSTEEILTAD DKELNRWCSL KKTCMYRSEQ 601 650 ENSP00000320917/1-709 EELRDKRAYS QKAQNSWKKR QVFKSLCREE AETPAEATGK PQRDEAGPQR ENSBTAP00000014206/1-711 EELQDKRVYS QKARNVWKKQ QIFKSLCPEE AEMPTEATGK PQRDRAGSSG bmy_13740T0/1-698 ---------- ---------- ---------- TEMPTEATGK PQRDKAGPQG BACU002494/1-702 EELQDKRAYS QKAQNVWKKR QIFKSLCPEE TEMPTEATGK PQRDKACPQG ENSTTRP00000007582/1-707 EELQDRRAYS QKAQNVWKKR QIFKSLCPEE TEMPTEATGK PQRDKAGPQG 651 700 ENSP00000320917/1-709 QLPALDGS-- -LMGPESPPA QEEEAPVSPH KKPAPQKRRR AKKARLLGPT ENSBTAP00000014206/1-711 QLVAPDGACG KRSQPESTPA EEEADPVTPT EKLAPQRRKR GKKARLLGPT bmy_13740T0/1-698 QLLAPDGACG KWPQPESPPV QEEAAPATPT EKPAPQRQRR GKKARLLGPT BACU002494/1-702 QLLAPDGACG KWPQPESPPV QEEAAPATPT EKPAPRRQRR GKKARLLGPT ENSTTRP00000007582/1-707 QLLAPDGL-- -W-EPESPPV QEEAAPATTA EKPAPQRQKR GKKARLLGPT 701 750 ENSP00000320917/1-709 VMLGGCEFSR QRLQAFGLNP KRLHFRQLGR QRRKQQGPKN SS ENSBTAP00000014206/1-711 VTLGGREFSR QRLQAFGLNP KRLHFRQLGR QRRKQQGPKS SH bmy_13740T0/1-698 VTLGGREFSR QRLQAFGLNP KRLHFRQLGR QRRKQQGPKS HP BACU002494/1-702 VTLGGREFSR QRLQAFGLNP KRLHFRQVGR QRRKQQGPKS HP ENSTTRP00000007582/1-707 VTLGGCEFSR QRLQAFGLNP KRLHFRQLGR QRRKRQGPKS HP