KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:36 2014 Check: 00 .. Name: BACU019011/1-247 Len: 277 Check: 7583 Weight: 1.00 Name: ENSTTRP00000005099/1-230 Len: 277 Check: 8759 Weight: 1.00 Name: ENSP00000421302/1-236 Len: 277 Check: 6841 Weight: 1.00 Name: bmy_08402T0/1-123 Len: 277 Check: 6445 Weight: 1.00 Name: ENSBTAP00000014212/1-178 Len: 277 Check: 1835 Weight: 1.00 // 1 50 BACU019011/1-247 --MLDGRQRR ---------- --GSNAPTSD MPGTRPNRCG RTWPIWVWLW ENSTTRP00000005099/1-230 --MLDGRQRR ---------- --GSNAPTSD MPGTRPNRCG RTWPIWVWLW ENSP00000421302/1-236 MPKAKGKTRR QKFGYSVNRK RLNRNARRKA APRIECSHIR HAWDHAKSVR bmy_08402T0/1-123 MPKAKGKTRR QKFGYNVNRK RLNRNARRKA APRIECSHIR HAWDQTKSVR ENSBTAP00000014212/1-178 MPKAKGKTRR QKFGYNVNRK RLNRNARRKA APRIECSHIR HAWDQTKSVR 51 100 BACU019011/1-247 TPTG------ ------PLLK RKVKALEVDV EERPKELMRK PYVLNDLEAE ENSTTRP00000005099/1-230 TPTG------ ------PLLK RKVKALEVDV EEGPKELMRK PYVLNDLEAE ENSP00000421302/1-236 QNLAEMGLAV DPNRAVPLRK RKVKAMEVDI EERPKELVRK PYVLNDLEAE bmy_08402T0/1-123 QNLADM---- ---------- ---------- ---------- -----DLEAE ENSBTAP00000014212/1-178 QNLAEMGLAM DPNRAVPLLK RKVKAMEVDV EERPKELVRK PYVLNDLEAE 101 150 BACU019011/1-247 ASLPEKKGNT LSRDLIDYVC YMVENHGEDY LWPGMRRITI KIPQNRFGIR ENSTTRP00000005099/1-230 ASLPEKKGNT LSRDLIDYVC YMVENHGEDY KAMGMRRITI KIPQNRFGIR ENSP00000421302/1-236 ASLPEKKGNT LSRDLIDYVR YMVENHGEDY ---------- ---------- bmy_08402T0/1-123 ASLPEKKGNT LSRDLIDYVC YMVENHGEDY ---------- ---------- ENSBTAP00000014212/1-178 ASLPEKKGNT LSRDLIDYVR YMVENHGENY KAM------- ---------- 151 200 BACU019011/1-247 STSISVFTQQ SGKPLSILCR RIRWRLSDWF T---PRLRLP PGPEKLEPGF ENSTTRP00000005099/1-230 STSISVFTQR SGKPLSIRCR RIRWRLSDWF T--LPQVEAS PGPEK-EPGF ENSP00000421302/1-236 ---------K SGKTSSILCR RGRWRWSDWF TSQLPQAEAS PGPVKLEPGC bmy_08402T0/1-123 ---------- ---------- KIRNKINVY- ---------- ---------- ENSBTAP00000014212/1-178 -------ARD EKNYYQDTPK QIRNKINVY- ---------- ---------- 201 250 BACU019011/1-247 KARRGVQLQM RLAKPNGIRR LQHTHTHTHT QNLSHFPL-G KALSPRGFNL ENSTTRP00000005099/1-230 KARRCA-ATD ELAKPHGIKR LQR---HIHT ----HFPG-G DNV-PRGFNL ENSP00000421302/1-236 KARRCCVAPE ELARSHGIRR LH-------- -TRAHSPLWG RNCSQRLQFI bmy_08402T0/1-123 ---------- --------KR FY-------- ---------- ----PAEWQA ENSBTAP00000014212/1-178 ---------- --------KR FY-------- ---------- ----PAEWQA 251 300 BACU019011/1-247 CSSGVSEKSQ NLLFSEWVVC LNVVCVQ ENSTTRP00000005099/1-230 CSSGVSGKSQ NLLFSEWVV- ------- ENSP00000421302/1-236 FIWGFTEKPE PAVFRVGDVN IVCT--- bmy_08402T0/1-123 FVDSLQKNKM EVE------- ------- ENSBTAP00000014212/1-178 FTDSLQKNKM EVE------- -------