KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:38 2014 Check: 00 .. Name: ENSTTRP00000001582/1-788 Len: 858 Check: 8800 Weight: 1.00 Name: ENSBTAP00000014227/1-771 Len: 858 Check: 6506 Weight: 1.00 Name: BACU001166/1-814 Len: 858 Check: 4781 Weight: 1.00 Name: bmy_10044T0/1-726 Len: 858 Check: 5598 Weight: 1.00 // 1 50 ENSTTRP00000001582/1-788 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014227/1-771 ---------- ---------- ---------- ---------- ---------- BACU001166/1-814 MEPCSSPALE ILSPNWSSEC GYSFTVLFPE VLEVELPVFC DHQGPQSNWS bmy_10044T0/1-726 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001582/1-788 ---------- ------MGDE KDSWKVKTLD EILQEKKRRK EQEEKAEIKR ENSBTAP00000014227/1-771 ---------- ------MGDE KDSWKVKTLD EILQEKKRRK EQEEKAEIKR BACU001166/1-814 QGRELHSKSL NSVLTQMGDE KDSWKVKTLD EILQEKKRRK EQEEKAEIKR bmy_10044T0/1-726 ---------- ------MGDE KDSWKVKTLD EILQEKKRRK EQEEKAEIKR 101 150 ENSTTRP00000001582/1-788 LKNSDDRDSK RDSLEEGELR DHRMEITIRN SPYRREGSME DXXXXXXXXX ENSBTAP00000014227/1-771 LKNSDDRDSK RDSLEEGELR DHRMEITIRN SPYRREDSME DRGEEDDSLA BACU001166/1-814 LKNSDDRDSK RDSLEEGELR DHRMEITIRN SPYRREDSME DRGEEDDSLA bmy_10044T0/1-726 LKNNNASSVK ---------- ------FFCT SKCR------ -RGEEDDSLA 151 200 ENSTTRP00000001582/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000014227/1-771 IKPPQQMSRK EKAHHRKDEK RKEKR----- -----KHARV KEKEREHERR BACU001166/1-814 IKPPQQMSRK EKAHHRKDEK RKEKRRHRSH SAEGGKHARV KEKEREHERR bmy_10044T0/1-726 IKPPQQMSRK EKAHHRKDEK RKEKR----- -----KHARV KEKEREHERR 201 250 ENSTTRP00000001582/1-788 XXXXXXXXXX XXXXXXXXXX KKENCLFRGE NGVCWFRDRL EQLERKRERE ENSBTAP00000014227/1-771 KRHREEQDKA RREWERQKRR ELAREHSRRE ------RDRL EQLERKRERE BACU001166/1-814 KRHREEQDKA RREWERQKRR ELAREHSRRE ---------- ------RESL bmy_10044T0/1-726 KRHREEQDKA RREWERQKRR ELAREHSRRE ---------- ---------- 251 300 ENSTTRP00000001582/1-788 RKMREQQKEQ REQKERERRA EERRKEREAR REVSAHHRTA REDYGDKVKP ENSBTAP00000014227/1-771 RKMREQQKEQ REQKERERRA EERRKEREAR REVSAHHRTV REDYSDKVKA BACU001166/1-814 RDGLLHGREV AGWKVLTLPA AG--AEQRAG TAVSAHHRTA REDYGDKVKA bmy_10044T0/1-726 RRVCAMGKGA SGTSSFLFSC ---------- -AVSAHHRTA REDYGDKVKA 301 350 ENSTTRP00000001582/1-788 SHWSRSPLRP PRERFELGDS RKPVKEEKVE ERDLLSDLQD ISGSERRTSS ENSBTAP00000014227/1-771 SHWSRSPLRP PRERLEPGDS RKPVKEEKVE ERDLLSDLQD VSDSERKTSS BACU001166/1-814 SHWSRSPLRP PRERFELGDS RKPVKEEKVE ERDLLSDLQD ISDSERKTSS bmy_10044T0/1-726 SHWSRSPLRP PRERFELGDS RKPVKEEKVE ERDLLSDLQD ISDSERKTSS 351 400 ENSTTRP00000001582/1-788 AESSSAESGS GSEEEEEEEE EEEEEEEEGS SSEESEG--- -EEEEEEEET ENSBTAP00000014227/1-771 AESSSAESGS GS-----EEE EEEEEEEEGS SSEESEEEEE EEEEEEEEET BACU001166/1-814 AESSSAESGS GS---EEEEE EEEEEEEEGS SSEESEG--E EEEEEEEEET bmy_10044T0/1-726 AESSSAESGS GS--EEEEEE EEEEEEEEGS SSEESEGEEE EEEEEEEEET 401 450 ENSTTRP00000001582/1-788 GSNSEDASGQ SAEEVSEEEM SEEEERENEN HVLVVPESRF DRDSGESEEG ENSBTAP00000014227/1-771 GSNSEDVSGQ SAEEVSEEEM SEDEERENEN HVLVVPESRF DHDSGESEEG BACU001166/1-814 GSNSEDASAQ SAEEVSEEEM SEEEERENEN HVLVVPESRF DRDSGESEEG bmy_10044T0/1-726 GSNSEDGSAQ SAEEVSEEEM SEEEERENEN HVLVVPESRF DRDSGESEEG 451 500 ENSTTRP00000001582/1-788 EEEVGEGTPQ SSALTEGDFV PDSPALSPIE LKQELPKYLP ALQGCRSVEE ENSBTAP00000014227/1-771 EEEAGEGTPQ SSALTEGDFV PDSPALSPIE LKQELPKYLP ALQGCRSVEE BACU001166/1-814 EEEVGEGTPQ SSALTEGDFV PDSPALSPIE LKQELPKYLP ALQGCRSVEE bmy_10044T0/1-726 EEEVGEGTPQ SSALTEGDFV PDSPALSPIE LKQELPKYLP ALQGCRSVEE 501 550 ENSTTRP00000001582/1-788 FQCLNRIEEG TYGVVYRAKD KKTDEIVALK RLKMEKEKEG FPITSLREIN ENSBTAP00000014227/1-771 FQCLNRIEEG TYGVVYRAKD KKTDEIVALK RLKMEKEKEG FPITSLREIN BACU001166/1-814 FQCLNRIEEG TYGVVYRAKD KKTDEIVALK RLKMEKEKEG FPITSLREIN bmy_10044T0/1-726 FQCLNRIEEG TYGVVYRAKD KKTDEIVALK RLKMEKEKEG FPITSLREIN 551 600 ENSTTRP00000001582/1-788 TILKAQHPNI VTVREIVVGS NMDKIYIVMN YVEHDLKSLM ETMKQPFLPG ENSBTAP00000014227/1-771 TILKAQHPNI VTVREIVVGS NMDKIYIVMN YVEHDLKSLM ETMKQPFLPG BACU001166/1-814 TILKAQHPNI VTVREIVVGS NMDKIYIVMN YVEHDLKSLM ETMKQPFLPG bmy_10044T0/1-726 TILKAQHPNI VTVREIVVGS NMDKIYIVMN YVEHDLKSLM ETMKQPFLPG 601 650 ENSTTRP00000001582/1-788 EVKTLMIQLL RGVKHLHDNW ILHRDLKTSN LLLSHAGILK VGDFGLAREY ENSBTAP00000014227/1-771 EVKTLMIQLL RGVKHLHDNW ILHRDLKTSN LLLSHAGILK VGDFGLAREY BACU001166/1-814 EVKTLMIQLL RGVKHLHDNW ILHRDLKTSN LLLSHAGILK VGDFGLAREY bmy_10044T0/1-726 EVKTLMIQLL RGVKHLHDNW ILHRDLKTSN LLLSHAGILK VGDFGLAREY 651 700 ENSTTRP00000001582/1-788 GSPLKAYTPV VVTLWYRAPE LLLGAKEYST AVDMWSVGCI FGELLTQKPL ENSBTAP00000014227/1-771 GSPLKAYTPV VVTLWYRAPE LLLGAKEYST AVDMWSVGCI FGELLTQKPL BACU001166/1-814 GSPLKAYTPV VVTLWYRAPE LLLGAKEYST AVDMWSVGCI FGELLTQKPL bmy_10044T0/1-726 GSPLKAYTPV VVTLWYRAPE LLLGAKEYST AVDMWSVGCI FGELLTQKPL 701 750 ENSTTRP00000001582/1-788 FPGKSEIDQI NKVFKDLGTP SEKIWPGYND LPAVKKMTFT EYPYNNLRKR ENSBTAP00000014227/1-771 FPGKSEIDQI NKVFKDLGTP SEKIWPGYND LPAVKKMTFT EYPYNNLRKR BACU001166/1-814 FPGKSEIDQI NKVFK---FS QEGNWS---- ---------- ----KKIRKR bmy_10044T0/1-726 FPGKSEIDQI NKVFKDLGTP SEKIWPGYND LPAVKKMTFT EYPYNNLRKR 751 800 ENSTTRP00000001582/1-788 FGALLSDQGF DLMNKFLTYF PGRRVSAEDG LKHEYFRETP LPIDPSMFPT ENSBTAP00000014227/1-771 FGALLSDQGF DLMNKFLTYF PGRRVNAEDG LKHEYFRETP LPIDPSMFPT BACU001166/1-814 FGALLSDQGF DLMNKFLTYF PGRRVSAEDG LKHEYFRETP LPIDPSMFPT bmy_10044T0/1-726 FGALLSDQGF DLMNKFLTYF PGRRVSAEDG LKHEYFRETP LPIDPSMFPT 801 850 ENSTTRP00000001582/1-788 WPAKSEQQRV KRGTSPRPPE GGLGYSQLGD DDLKETGFHL TTTNQGASAA ENSBTAP00000014227/1-771 WPAKSEQQRV KRGTSPRPPE GGLGYSQLGD DDLKETGFHL TTTNQGASAA BACU001166/1-814 WPAKSEQQRV KRGTSPRPPE GGLGYSQLGD DDLKETGFHL TTTNQGASAA bmy_10044T0/1-726 WPAKSEQQRV KRGTSPRPPE GGLGYSQLGD DDLKETGFHL TTTNQGASAA 851 900 ENSTTRP00000001582/1-788 GPGFSLKF ENSBTAP00000014227/1-771 GPGFSLKF BACU001166/1-814 GPGFSLKF bmy_10044T0/1-726 GPGFSLKF