KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:39 2014 Check: 00 .. Name: ENSP00000220514/1-229 Len: 246 Check: 4229 Weight: 1.00 Name: ENSBTAP00000014256/1-246 Len: 246 Check: 6089 Weight: 1.00 Name: ENSTTRP00000009336/1-228 Len: 246 Check: 6603 Weight: 1.00 Name: bmy_09163T0/1-229 Len: 246 Check: 4916 Weight: 1.00 Name: BACU008512/1-188 Len: 246 Check: 2778 Weight: 1.00 // 1 50 ENSP00000220514/1-229 MAAQPLRHRS RCATPPRGDF CGGTERAIDQ ASFTTSMEWD TQVVKGSSPL ENSBTAP00000014256/1-246 MAARPRRHIS GIAKQPQGDF CDGAKKAIDE PSFATSMEWD TQVVKGSSPV ENSTTRP00000009336/1-228 MAARPRRHRS RFAKQPRGDF CDGAKKTIDE PSLTTSMEWD TQVVKGSSPL bmy_09163T0/1-229 MAARPRRHRS RIAKQPRGDF CDGAKKAIDE PSLTTSMEWD TQVVKGSSPL BACU008512/1-188 MAARPRRHRS RVAKQPRGDF CDGAKKAIDE PSLTTSMEWD TQVVKGSSPL 51 100 ENSP00000220514/1-229 GPAGLGAEEP AAGPQLPSWL QPERCAVFQC AQCHAVLADS VHLAWDLSRS ENSBTAP00000014256/1-246 GPAGLGLEKL PSRPRLPQWL QPERCAVFQC AQCHAVLADS VHLAWDLSRS ENSTTRP00000009336/1-228 GPAGLGPEEP S-GPRLPWWL QPERCAVFQC AQCHVVLADS VHLAWNLSRS bmy_09163T0/1-229 DPAGLGPEEP SPGPRLPWWL QPERCAVFQC AQCHAVLADS VHLAWDLSRS BACU008512/1-188 GPAGLGPEEP SPGPRLPWWL QPERCAVFQC AQCHAVLADS VHLAWDLSRS 101 150 ENSP00000220514/1-229 LGAVVFSRVT NNVVLEAPFL VGIEGSLKGS TYNLLFCGSC GIPVGFHLYS ENSBTAP00000014256/1-246 LGAVVFSRVT NNVVLEAPFL VGIEGSLKGS TYNLLFCSFC EIPIGFHLYS ENSTTRP00000009336/1-228 LAAVVFSRVT NNVVLEAPFL VGIDGSLKGS TYNLLFCSSC EIPIGFHLYS bmy_09163T0/1-229 LGAVVFSRVT NNVVLEAPFL VGIEGSLKGS TYNLLFCSSC EIPIGFHLYS BACU008512/1-188 LGAVVFSRVT NNVVLEAPFL VGIEGSLKGS ---------- ---------- 151 200 ENSP00000220514/1-229 THAALAALRG HFCLSSDKMV CYLLKTKAIV NASEMDIQNV PLSEKIAELK ENSBTAP00000014256/1-246 THAALAALRG HFCLSSDKMV CYLLKTKAIV NASEMDIHII PLPEKVAELK ENSTTRP00000009336/1-228 THAALAALRG HFCLSTDKMV CYLLKTKAIV NASEMDIHNV SLPEKVAELK bmy_09163T0/1-229 THAALAALRG HFCLSTDKMV CYLLKTKAIV NASEMDIHNV PLPEKVAELK BACU008512/1-188 ---------- ---------- -YLLKTKAIV NASEMDIHNV PLPEKVAELK 201 250 ENSP00000220514/1-229 EKIVLTHNRL KSLMKILSEV TPDQSKPEN- ---------- ------ ENSBTAP00000014256/1-246 EKIMLTHTRL NSLMKILKEM PPDQSKKRNS NNRKIIKGMV KTPNIH ENSTTRP00000009336/1-228 EKIMLTHTRL NSLIKILKEG TPDQSKPTN- ---------- ------ bmy_09163T0/1-229 EKIMLTHTRL NSLMKILKEL TPDQSKPTN- ---------- ------ BACU008512/1-188 EKIMLTHTRL NSLMKILKEV TPDQSKPTN- ---------- ------