KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:39 2014 Check: 00 .. Name: ENSP00000352265/1-290 Len: 445 Check: 3494 Weight: 1.00 Name: BACU006551/1-433 Len: 445 Check: 9684 Weight: 1.00 Name: ENSBTAP00000014258/1-290 Len: 445 Check: 2184 Weight: 1.00 Name: bmy_06631T0/1-285 Len: 445 Check: 402 Weight: 1.00 Name: ENSTTRP00000000363/1-290 Len: 445 Check: 2762 Weight: 1.00 // 1 50 ENSP00000352265/1-290 ---------- --MAAVEKRR QAVPPPAGFT DSGRQSVSRA AGAAESEEDF BACU006551/1-433 ---------- --MAAVEKRR LAVAQAANFT GSGRPGVSRA AATAESEEDF ENSBTAP00000014258/1-290 ---------- --MAAVEKRR QAVAQATSFT DSGRPGVPRT AATAESEEDF bmy_06631T0/1-285 MDVLPVPLPS AKMAAVEKRR LAVAQAANFT GSGRPGVSRA AATAESEEDF ENSTTRP00000000363/1-290 ---------- --MAAVEKRR LPVAQAANFT GSGRPGVSRA AATAESEEDF 51 100 ENSP00000352265/1-290 LRQVGVTEML RAALLKVLEA RPEEPIAFLA HYFENMGLRS PVNGGAGEPP BACU006551/1-433 LRQVGVTEML RAALLKVLEA RPEEPIAFLA HYFENMGLRS PANGGAGEPP ENSBTAP00000014258/1-290 LRQVGVTEML RAALLKVLEA RPEEPIAFLA HYFENMGLRS PANGGAGEPP bmy_06631T0/1-285 LRQVGVTEML RAALLKVLEA RPEEPIAFLA HYFENMGLRS PANGGVGEPP ENSTTRP00000000363/1-290 LRQVGVTEML RAALLKVLEA RPEEPIAFLA HYFENMDLRS PANGGAGEPP 101 150 ENSP00000352265/1-290 GQLLLQQQRL GRALWHLRLA HHSQRAAFNN NVSVAYECLS AGGRRKRPGL BACU006551/1-433 GQLLLQQQRL GRALWHLRLA HHSQRTAFNN NVGVAYECLS ASGRKKKPGL ENSBTAP00000014258/1-290 GQLLLQQQRL GRALWHLRLA HHSQRTAFNN NVGVAYECLS ASGRKKKPGL bmy_06631T0/1-285 GQLLLQQQRL GRALWHLRLA HHSQ------ ---------- -SGRKKKPGL ENSTTRP00000000363/1-290 GQLLLQQQRL GRALWHLRLA HHSQRTAFNN NVGVAYECLS ASGRKKKPGL 151 200 ENSP00000352265/1-290 DGRTYSELLR RICRDGQAPE EVVAPLLRKV QCRDHEAVPL SVFRAGTLTC BACU006551/1-433 DGRTYSELLK RICRDGEAPE EVVAPLLRKI QCRDHEAVPL AVFRAGMLTC ENSBTAP00000014258/1-290 DGRTYSELLK RICRDGEAPE EVVAPLLRKI QCRDHEAVPL AVFRAGMLTC bmy_06631T0/1-285 DGRTYSELLK RICRDGEAPE EVVAPLLRKI QCRDHEAVPL AVFRAGMLTC ENSTTRP00000000363/1-290 DGRTYSELLK RICRDGEAPE EVVAPLLRKI QCRDHEAVPL AVFRAGMLTC 201 250 ENSP00000352265/1-290 FVLLEFVARA GALFQLLEDS AAAVADRRVG QAVLDTLEGA LQASDAAAPA BACU006551/1-433 FVLLEFVARA GALYRLLEDP GLAVADRHVG QAVLDTLEGA LQASDDTAPA ENSBTAP00000014258/1-290 FVLLEFVARA GALYRLLEDP GLAMADRRLG QAVLDTLEGA LQASDDTAPA bmy_06631T0/1-285 FVLLEFVARA GALYRLLEDP GLAVADRHVG QAVLDTLEGA LQASDDTAPA ENSTTRP00000000363/1-290 FVLLEFVARA GALYRLLEDP GLAVADRHVG QAVLDTLEGA LQASDDTTPA 251 300 ENSP00000352265/1-290 RFLEAGSRLG PD-------- ---------- ---------- ---------- BACU006551/1-433 RYLEAGSRPG PDHPGLXXXX XXXXXXGGPA AQRPHDPGGV PGEGGRPLHR ENSBTAP00000014258/1-290 RYLEAGSRLG PD-------- ---------- ---------- ---------- bmy_06631T0/1-285 RYLEAGSRLG PD-------- ---------- ---------- ---------- ENSTTRP00000000363/1-290 RYLEAGSRLG PD-------- ---------- ---------- ---------- 301 350 ENSP00000352265/1-290 -----SLALA LDR------- ---------- -------AVG GRRPSAPMTR BACU006551/1-433 QGQARGLSPS LGRRCLHPDT WGPRGPAHRG QDWGVPACQG CREPPSPSFP ENSBTAP00000014258/1-290 -----SLALA MDR------- ---------- -------ALV ARRPSAPMTR bmy_06631T0/1-285 -----SLALA MDR------- ---------- -------ALV ARRPSAPMTR ENSTTRP00000000363/1-290 -----SLALA MDR------- ---------- -------ALV ARRPSTPMTR 351 400 ENSP00000352265/1-290 EEFLERAAA- ---------- ---LFIAKVK ---------- ---------- BACU006551/1-433 PGMMPEPPSG GGQGSLPARL PRPLSSAEIK SVPQADPVCV CVRPCPAPST ENSBTAP00000014258/1-290 EEFLEKAAA- ---------- ---LFIAKVK ---------- ---------- bmy_06631T0/1-285 EEFLEKAAA- ---------- ---LFIAKVK ---------- ---------- ENSTTRP00000000363/1-290 EEFLEKAAA- ---------- ---LFIAKVK ---------- ---------- 401 450 ENSP00000352265/1-290 ------PVG- ---------- ---------- ---------- ----- BACU006551/1-433 LPWKRSPLGR TLASPGGSHH CPETPGSPWT QLYESRGHWG LDAQP ENSBTAP00000014258/1-290 ------PVG- ---------- ---------- ---------- ----- bmy_06631T0/1-285 ------PVG- ---------- ---------- ---------- ----- ENSTTRP00000000363/1-290 ------PVG- ---------- ---------- ---------- -----