KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:52:39 2014 Check: 00 .. Name: ENSP00000453403/1-441 Len: 471 Check: 3596 Weight: 1.00 Name: ENSTTRP00000009350/1-407 Len: 471 Check: 8124 Weight: 1.00 Name: ENSBTAP00000014263/1-465 Len: 471 Check: 8538 Weight: 1.00 Name: bmy_09162T0/1-392 Len: 471 Check: 5681 Weight: 1.00 Name: BACU008511/1-406 Len: 471 Check: 6398 Weight: 1.00 // 1 50 ENSP00000453403/1-441 MIIPSLEELD SLKYSDLQNL AKSLGLRANL RATKLLKALK GYIKHEARKG ENSTTRP00000009350/1-407 MTVPSLEELD SFKYSDLQNL AKSLGLRANL RADKLLRALK AHLKNEARKE ENSBTAP00000014263/1-465 MIVPSLEELN SFKYSDLQNL AKSLGLRANL RADKLLRALK AHLKNEARKE bmy_09162T0/1-392 MTVPSLEELD SFKYSDLQNL AKSLGLRANL RADKLLRALK AHLKNEARKE BACU008511/1-406 MTVPSLEELD SFKYSDLQNL AKSLGLRANL RADKLLRALK AHLKNEARKE 51 100 ENSP00000453403/1-441 NENQDESQTS ASSCDETEIQ ISNQEEAERQ PLGHVTKTRR RCKTVRVDPD ENSTTRP00000009350/1-407 NENQDEIQTS ASSCDEIEVQ LSSQEQAERE PVGHVTKTRR RRRTVYRSPD ENSBTAP00000014263/1-465 NENQDEIQTS ASSCDEPEIQ TSSQEQAERE PDDHVTKTRG RRKTVHRSPD bmy_09162T0/1-392 NENQDEIQTS ASSCDEIEVQ LSSQEQAERE PVGHVTKTRR RRRTVRRSPD BACU008511/1-406 NENQDEIQTS ASSCDEIEVQ LSSQQQAERE PVGHVTKTRR RRRTVRRSPD 101 150 ENSP00000453403/1-441 SQ-------- ---------Q NHSEIKISNP TEFQNHEKQE SQDLRATAKV ENSTTRP00000009350/1-407 SQ-------- ---------Q DHSEIKVCDP TEFQNQEKHE NQALRTIVEA ENSBTAP00000014263/1-465 SQANGNVQTE KKLPPVPNLQ NHSEIKLCGP TKSQNQEKHE NQVLRTAVEV bmy_09162T0/1-392 SQ-------- ---------- ---ESNLCH- ---------- -------VCL BACU008511/1-406 SQ-------- ---------Q DHSEIKVCDP TEFQNQEKHE NQALRTAVEA 151 200 ENSP00000453403/1-441 PSPPDEHQEA ENAVSS---- --GNRDSKVP SEGKKSLYTD ESSKPGKNKR ENSTTRP00000009350/1-407 PSLPNKSQ-D ENAVPS---- --GNEGPKIP SERKKSLYTD GFSKPRKNKR ENSBTAP00000014263/1-465 PSLPNESQGD ENTVSSGKHG IDGNEDPRVP SKRKKSLYTD GFSKPGKNK- bmy_09162T0/1-392 PVVPSLYY-S QMHVLM---- TFGNEGPKIP SERKKSLYTN GFSKRGKNKR BACU008511/1-406 PSLPNKSQ-D ENAVPSGKSG INGNEGPKIP SERKKSLYTD GFSKRGKNKR 201 250 ENSP00000453403/1-441 TAITTPNFKK LHEAHFKEME SIDQYIERKK KHFEEHNSMN ELK---QQPI ENSTTRP00000009350/1-407 TASTTPNFKK LHEARFKEME SIDQYVERKK KHFEEHNSFN ELK---KQPG ENSBTAP00000014263/1-465 TASTTPNFKK LHEARFKEME SIDQYVERKK KHFEEHNSFN ELKVLQRQPV bmy_09162T0/1-392 TASTTPNFKK LHEARFKEME SIDQYVERKK KHFEEHNSFN ELK---KQPG BACU008511/1-406 TASTTPNFKK LHEARFKEME SIDQYVERKK KHFEEHNSFN ELK---KQSG 251 300 ENSP00000453403/1-441 NKGGVRTPVP PRGRLSVAST PISQRRSQGR SCGPASQSTL GLKGSLKRSA ENSTTRP00000009350/1-407 TKGVVATPVP PRERLSVART PASQRGSQGR P--HAGRSTS CVKGLAKRSV ENSBTAP00000014263/1-465 TKGVPATPVP ARGRLSVACT PGSQRRSQGR P--HAGRSTL CVKGSAKRSA bmy_09162T0/1-392 TKGVAATPVP PRERLSVACT PASQRGSQGR P--HAGRSTL CAKGLAKRSA BACU008511/1-406 TKGVAATPVP PRERPSVACT PASQRGSQGR P--HAGRSTL CVKRLAKRSA 301 350 ENSP00000453403/1-441 ISAAKTGVRF SAATKDNEHK RSLTKTPARK SAHVTVSGGT PKGEAVLGTH ENSTTRP00000009350/1-407 LSAAKMNVRF SAATKDNEHK RSLTKTPARK SAHVTTSGST PKGQAVLETH ENSBTAP00000014263/1-465 LSAAKMNVRF SAATKDNEHK RSLTKTPARK SPHVTTSVNT PKGQAVLGTH bmy_09162T0/1-392 LSATKMNVRF SAATKDNEHK RSLTKTPARK SPHVTTSGST PKGQAVLGTH BACU008511/1-406 LSGTKMNVRF SAATKDNEHK RSLTKTPARK SPHVTTSGST PKGQAVLGTH 351 400 ENSP00000453403/1-441 KLKTITGNSA AVITPFKLTT EATQTPVSNK KPVFDLKASL SRPLNYEPHK ENSTTRP00000009350/1-407 KLKTTRAESA AVITPFKLTA ETVQTPISHR KPVFDLKASL SRPLNYEPHK ENSBTAP00000014263/1-465 KLKTTRGESV AVITPFKLTT EASQTPISHK KPVFDLKASL SRPLNYEPHK bmy_09162T0/1-392 KLKTTRAESA AVITPFILTT EAAQTP---- ---------- ---------- BACU008511/1-406 KLKTTRAESA A--------- ---------- ---------- ---------- 401 450 ENSP00000453403/1-441 GKLKPWGQSK ENNYLNQHVN RINFYKKTYK QPHL---QTK EEQRKKREQE ENSTTRP00000009350/1-407 GKLKPWGQSK ENSSLNEHVN RVSLHKKSYK QPHR---QT- ---------- ENSBTAP00000014263/1-465 GKLKPWGQSK ENNSLHEHVN RVSFHKKTYK QPRL---QTR EEQRKKHERE bmy_09162T0/1-392 -----ISHRK PVFDLKASLS R-PLNYEPHK EPNVYLSLLR EEQRKKHEQE BACU008511/1-406 GKLKPWGQSK ENSSLNEHVN RVSLHKKSYK QPHL---QTR EEQRKKHEQE 451 500 ENSP00000453403/1-441 RKEKKAKVLG MRRGLILAED - ENSTTRP00000009350/1-407 ---------- ---------- - ENSBTAP00000014263/1-465 RKEKKEKVLG VRRGLIIAER S bmy_09162T0/1-392 RKEKKAKVLG VRRGLIMAEH S BACU008511/1-406 RKEKKAKVLG VRRGLIMAEH S