KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:52:43 2014 Check: 00 .. Name: ENSP00000416892/1-564 Len: 607 Check: 2840 Weight: 1.00 Name: bmy_01135T0/1-579 Len: 607 Check: 3263 Weight: 1.00 Name: ENSBTAP00000014281/1-564 Len: 607 Check: 2652 Weight: 1.00 Name: ENSTTRP00000004536/1-594 Len: 607 Check: 4128 Weight: 1.00 // 1 50 ENSP00000416892/1-564 ---------- ---------- ---------- ---------- ---MSYPADD bmy_01135T0/1-579 ISGGPGRASG FPAASKGLDF RRQEAGEARL FRSFRARSAS AAAMSYPADD ENSBTAP00000014281/1-564 ---------- ---------- ---------- ---------- ---MSYPADD ENSTTRP00000004536/1-594 ISGGSGRASG FPAAS-GAGL PASRGRRGPP FPFFPARSAS GAAMSYPADD 51 100 ENSP00000416892/1-564 YESEAAYDPY AYPSDYDMHT GDPKQDLAYE RQYEQQTYQV IPEVIKNFIQ bmy_01135T0/1-579 YESE------ ---------- -----DLAYE RQYEQQTYQV IPEVIKNFIQ ENSBTAP00000014281/1-564 YESEAAYDPY AYPGDYDMHT GDPKQDLAYE RQYEQQTYQV IPEVIKNFIQ ENSTTRP00000004536/1-594 YESEAAYDPY AYPGDYDMHT GDPKQDLAYE RQYEQQTYQV IPEVIKNFIQ 101 150 ENSP00000416892/1-564 YFHKTVSDLI DQKVYELQAS RVSSDVIDQK VYEIQDIYEN SWTKLTERFF bmy_01135T0/1-579 YFHKTVSDLI DQKVYELQAS RVSSDVIDQK VYEIQDIYEN SWTKLTERFF ENSBTAP00000014281/1-564 YFHKTVSDLI DQKVYELQAS RVSSDVIDQK VYEIQDIYEN SWTKLTERFF ENSTTRP00000004536/1-594 YFHKTVSDLI DQKVYELQAS RVSSDVIDQK VYEIQDIYEN SWTKLTERFF 151 200 ENSP00000416892/1-564 KNTPWPEAEA IAPQVGNDAV FLILYKELYY RHIYAKVSGG PSLEQRFESY bmy_01135T0/1-579 KNTPWPEAET IAPQVGNDAV FLILYKELYY RHIYAKVSGG PSLEQRFESY ENSBTAP00000014281/1-564 KNTPWPEAET IAPQVGNDAV FLILYKELYY RHIYAKVSGG PSLEQRFESY ENSTTRP00000004536/1-594 KNTPWPEAET IAPQVGNDAV FLILYKELYY RHIYAKVSGG PSLEQRFESY 201 250 ENSP00000416892/1-564 YNYCNLFNYI LNADGPAPLE LPNQWLWDII DEFIYQFQSF SQYRCKTAKK bmy_01135T0/1-579 YNYCNLFNYI LNADGPAPLE LPNQWLWDII DEFIYQFQSF SQYRCKTAKK ENSBTAP00000014281/1-564 YNYCNLFNYI LNADGPAPLE LPNQWLWDII DEFIYQFQSF SQYRCKTAKK ENSTTRP00000004536/1-594 YNYCNLFNYI LNADGPAPLE LPNQWLWDII DEFIYQFQSF SQYRCKTAKK 251 300 ENSP00000416892/1-564 SEEEIDFLRS NPKIWNVHSV LNVLHSLVDK SNINRQLEVY TSGGDPESVA bmy_01135T0/1-579 SEEEIDFLRS NPKIWNVHSV LNVLHSLVDK SNINRQLEVY TSGGDPESVA ENSBTAP00000014281/1-564 SEEEIDFLRS NPKIWNVHSV LNVLHSLVDK SNINRQLEVY TSGGDPESVA ENSTTRP00000004536/1-594 SEEEIDFLRS NPKIWNVHSV LNVLHSLVDK SNINRQLEVY TSGGDPESVA 301 350 ENSP00000416892/1-564 GEYGRHSLYK MLGYFSLVGL LRLHSLLGDY YQAIKVLENI ELNKKSMYSR bmy_01135T0/1-579 GEYGRHSLYK MLGYFSLVGL LRLHSLLGDY YQAIKVLENI ELNKKSMYSR ENSBTAP00000014281/1-564 GEYGRHSLYK MLGYFSLVGL LRLHSLLGDY YQAIKVLENI ELNKKSMYSR ENSTTRP00000004536/1-594 GEYGRHSLYK MLGYFSLVGL LRLHSLLGDY YQAIKVLENI ELNKKSMYSR 351 400 ENSP00000416892/1-564 VPECQVTTYY YVGFAYLMMR RYQDAIRVFA NILLYIQRTK SMFQRTTYKY bmy_01135T0/1-579 VPECQVTTYY YVGFAYLMMR RYQDAIRVFA NILLYIQRTK SMFQRTTYKY ENSBTAP00000014281/1-564 VPECQVTTYY YVGFAYLMMR RYQDAIRVFA NILLYIQRTK SMFQRTTYKY ENSTTRP00000004536/1-594 VPECQVTTYY YVGFAYLMMR RYQDAIRVFA NILLYIQRTK SMFQRTTYKY 401 450 ENSP00000416892/1-564 EMINKQNEQM HALLAIALTM YPMRIDESIH LQLREKYGDK MLRMQKGDPQ bmy_01135T0/1-579 EMINKQNEQM HALLAIALTM YPMRIDESIH LQLREKYGDK MLRMQKGDPQ ENSBTAP00000014281/1-564 EMINKQNEQM HALLAIALTM YPMRIDESIH LQLREKYGDK MLRMQKGDPQ ENSTTRP00000004536/1-594 EMINKQNEQM HALLAIALTM YPMRIDESIH LQLREKYGDK MLRMQKGDPQ 451 500 ENSP00000416892/1-564 VYEELFSYSC PKFLSPVVPN YDNVHPNYHK EPFLQQLKVF SDEVQQQAQL bmy_01135T0/1-579 VYEELFSYSC PKFLSPVVPN YDNVHPNYHK EPFLQQLKVF SDEVQQQAQL ENSBTAP00000014281/1-564 VYEELFSYSC PKFLSPVVPN YDNVHPNYHK EPFLQQLKVF SDEVQQQAQL ENSTTRP00000004536/1-594 VYEELFSYSC PKFLSPVVPN YDNVHPNYHK EPFLQQLKVF SDEVQQQAQL 501 550 ENSP00000416892/1-564 STIRSFLKLY TTMPVAKLAG FLDLTEQEFR IQLLVFKHKM KNLVWTSGIS bmy_01135T0/1-579 STIRSFLKLY TTMPVAKLAG FLDLTEQEFR IQLLVFKHKM KNLVWTSGIS ENSBTAP00000014281/1-564 STIRSFLKLY TTMPVAKLAG FLDLTEQEFR IQLLVFKHKM KNLVWTSGIS ENSTTRP00000004536/1-594 STIRSFLKLY TTMPVAKLAG FLDLTEQEFR IQLLVFKHKM KNLVWTSGIS 551 600 ENSP00000416892/1-564 ALDGEFQSAS EVDFYIDKDM IHIADTKVAR RYGDFFIRQI HKFEELNRTL bmy_01135T0/1-579 ALDGEFQSAS E-------DM IHIADTKVAR RYGDFFIRQI HKFEELNRTL ENSBTAP00000014281/1-564 ALDGEFQSAS EVDFYIDKDM IHIADTKVAR RYGDFFIRQI HKFEELNRTL ENSTTRP00000004536/1-594 ALDGEFQSAS EVDFYIDKDM IHIADTKVAR RYGDFFIRQI HKFEE----- 601 650 ENSP00000416892/1-564 KKMGQRP bmy_01135T0/1-579 KKMGQRP ENSBTAP00000014281/1-564 KKMGQRP ENSTTRP00000004536/1-594 -------